RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 NUBP1P53384 320 aa19.76■□□□□ 0.75
TSPAN4-215ENST00000525334 CDH8P55286 799 aa19.76■□□□□ 0.75
TSPAN4-215ENST00000525334 UBE2HP62256 183 aa19.76■□□□□ 0.75
TSPAN4-215ENST00000525334 CYP4F8P98187 520 aa19.76■□□□□ 0.75
TSPAN4-215ENST00000525334 SGSM1Q2NKQ1 1148 aa19.76■□□□□ 0.75
TSPAN4-215ENST00000525334 MDH1BQ5I0G3 518 aa19.76■□□□□ 0.75
TSPAN4-215ENST00000525334 ANKRD40Q6AI12 368 aa19.76■□□□□ 0.75
TSPAN4-215ENST00000525334 MYCBPAPQ8TBZ2 947 aa19.76■□□□□ 0.75
TSPAN4-215ENST00000525334 PCED1BQ96HM7 432 aa19.76■□□□□ 0.75
TSPAN4-215ENST00000525334 SDCBP2Q9H190 292 aa19.76■□□□□ 0.75
TSPAN4-215ENST00000525334 DPEP3Q9H4B8 488 aa19.76■□□□□ 0.75
TSPAN4-215ENST00000525334 MMRN2Q9H8L6 949 aa19.76■□□□□ 0.75
TSPAN4-215ENST00000525334 TRPV4Q9HBA0 871 aa19.76■□□□□ 0.75
TSPAN4-215ENST00000525334 ARHGEF3Q9NR81 526 aa19.76■□□□□ 0.75
TSPAN4-215ENST00000525334 MAGEC2Q9UBF1 373 aaPredicted RBP19.76■□□□□ 0.75
TSPAN4-215ENST00000525334 TRIM49BA6NDI0 452 aa19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 A8MXQ7 604 aa19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 ASS1P00966 412 aaKnown RBP19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 CSH1P0DML2 217 aa19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 CSH2P0DML3 217 aa19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 EPB41P11171 864 aaKnown RBP19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 CDC25CP30307 473 aa19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 VIPR2P41587 438 aa19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 MAGEA11P43364 429 aa19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 MCCD1P59942 119 aaPredicted RBP19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 CYP27A1Q02318 531 aa19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 NHLH1Q02575 133 aa19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 GRM2Q14416 872 aa19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 ARHGAP15Q53QZ3 475 aa19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 GPR158Q5T848 1215 aa19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 SPOPLQ6IQ16 392 aa19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 SCN4BQ8IWT1 228 aa19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 ZC3H3Q8IXZ2 948 aaKnown RBP19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 TMEM105Q8N8V8 129 aa19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 TAF4BQ92750 862 aa19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 GCNAQ96QF7 691 aa19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 MAGED2Q9UNF1 606 aaPredicted RBP19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 NCANO14594 1321 aa19.75■□□□□ 0.75
TSPAN4-215ENST00000525334 PTPRDP23468 1912 aa19.74■□□□□ 0.75
TSPAN4-215ENST00000525334 SLC38A8A6NNN8 435 aa19.74■□□□□ 0.75
TSPAN4-215ENST00000525334 PSMA7O14818 248 aa19.74■□□□□ 0.75
TSPAN4-215ENST00000525334 CD44P16070 742 aaKnown RBP19.74■□□□□ 0.75
TSPAN4-215ENST00000525334 PTPN1P18031 435 aaKnown RBP19.74■□□□□ 0.75
TSPAN4-215ENST00000525334 BMP6P22004 513 aa19.74■□□□□ 0.75
TSPAN4-215ENST00000525334 BDNFP23560 247 aa19.74■□□□□ 0.75
TSPAN4-215ENST00000525334 FKBP3Q00688 224 aaKnown RBP19.74■□□□□ 0.75
TSPAN4-215ENST00000525334 LRRC63Q05C16 580 aa19.74■□□□□ 0.75
TSPAN4-215ENST00000525334 TCF15Q12870 199 aa19.74■□□□□ 0.75
TSPAN4-215ENST00000525334 STIM1Q13586 685 aa19.74■□□□□ 0.75
TSPAN4-215ENST00000525334 VITQ6UXI7 678 aa19.74■□□□□ 0.75
TSPAN4-215ENST00000525334 TMEM150AQ86TG1 271 aa19.74■□□□□ 0.75
TSPAN4-215ENST00000525334 TAS1R2Q8TE23 839 aa19.74■□□□□ 0.75
TSPAN4-215ENST00000525334 TMEM8AQ9HCN3 771 aa19.74■□□□□ 0.75
TSPAN4-215ENST00000525334 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.74■□□□□ 0.755e-7■■■■■ 86.5
TSPAN4-215ENST00000525334 BIN1O00499 593 aa19.73■□□□□ 0.75
TSPAN4-215ENST00000525334 SLC16A3O15427 465 aaKnown RBP19.73■□□□□ 0.75
TSPAN4-215ENST00000525334 NOL4O94818 638 aa19.73■□□□□ 0.75
TSPAN4-215ENST00000525334 F11P03951 625 aa19.73■□□□□ 0.75
TSPAN4-215ENST00000525334 P4HA1P13674 534 aa19.73■□□□□ 0.75
TSPAN4-215ENST00000525334 CCNE1P24864 410 aa19.73■□□□□ 0.75
TSPAN4-215ENST00000525334 GTF2H1P32780 548 aa19.73■□□□□ 0.75
TSPAN4-215ENST00000525334 ASPAP45381 313 aa19.73■□□□□ 0.75
TSPAN4-215ENST00000525334 PTPN5P54829 565 aa19.73■□□□□ 0.75
TSPAN4-215ENST00000525334 NLRP12P59046 1061 aa19.73■□□□□ 0.75
TSPAN4-215ENST00000525334 PFKPQ01813 784 aa19.73■□□□□ 0.75
TSPAN4-215ENST00000525334 MORC3Q14149 939 aa19.73■□□□□ 0.75
TSPAN4-215ENST00000525334 VSTM1Q6UX27 236 aa19.73■□□□□ 0.75
TSPAN4-215ENST00000525334 B3GALNT2Q8NCR0 500 aa19.73■□□□□ 0.75
TSPAN4-215ENST00000525334 RSPRY1Q96DX4 576 aa19.73■□□□□ 0.75
TSPAN4-215ENST00000525334 DHTKD1Q96HY7 919 aaPredicted RBP19.73■□□□□ 0.75
TSPAN4-215ENST00000525334 TASP1Q9H6P5 420 aa19.73■□□□□ 0.75
TSPAN4-215ENST00000525334 TBC1D17Q9HA65 648 aa19.73■□□□□ 0.75
TSPAN4-215ENST00000525334 NUP210Q8TEM1 1887 aaPredicted RBP19.73■□□□□ 0.75
TSPAN4-215ENST00000525334 COL4A3Q01955 1670 aa19.72■□□□□ 0.75
TSPAN4-215ENST00000525334 PI15O43692 258 aa19.72■□□□□ 0.75
TSPAN4-215ENST00000525334 OBSL1O75147 1896 aa19.72■□□□□ 0.75
TSPAN4-215ENST00000525334 PSMC3P17980 439 aa19.72■□□□□ 0.75
TSPAN4-215ENST00000525334 AOC1P19801 751 aa19.72■□□□□ 0.75
TSPAN4-215ENST00000525334 HOXD11P31277 338 aaPredicted RBP19.72■□□□□ 0.75
TSPAN4-215ENST00000525334 GRIK1P39086 918 aa19.72■□□□□ 0.75
TSPAN4-215ENST00000525334 PPP1R2P41236 205 aa19.72■□□□□ 0.75
TSPAN4-215ENST00000525334 NOP14P78316 857 aaKnown RBP19.72■□□□□ 0.75
TSPAN4-215ENST00000525334 KRT39Q6A163 491 aa19.72■□□□□ 0.75
TSPAN4-215ENST00000525334 GPIHBP1Q8IV16 184 aa19.72■□□□□ 0.75
TSPAN4-215ENST00000525334 ARID3BQ8IVW6 561 aaPredicted RBP19.72■□□□□ 0.75
TSPAN4-215ENST00000525334 DEPDC1BQ8WUY9 529 aa19.72■□□□□ 0.75
TSPAN4-215ENST00000525334 TRMT2BQ96GJ1 504 aaKnown RBP19.72■□□□□ 0.75
TSPAN4-215ENST00000525334 TRMT61BQ9BVS5 477 aaKnown RBP19.72■□□□□ 0.75
TSPAN4-215ENST00000525334 IMPG2Q9BZV3 1241 aa19.72■□□□□ 0.75
TSPAN4-215ENST00000525334 ZNF518BQ9C0D4 1074 aa19.72■□□□□ 0.75
TSPAN4-215ENST00000525334 APOBEC3GQ9HC16 384 aaKnown RBP19.72■□□□□ 0.75
TSPAN4-215ENST00000525334 PIEZO1Q92508 2521 aa19.72■□□□□ 0.75
TSPAN4-215ENST00000525334 CACNA1HO95180 2353 aa19.71■□□□□ 0.75
TSPAN4-215ENST00000525334 HEPACAM2A8MVW5 462 aa19.71■□□□□ 0.75
TSPAN4-215ENST00000525334 PPP1R3GB7ZBB8 358 aa19.71■□□□□ 0.75
TSPAN4-215ENST00000525334 STK25O00506 426 aa19.71■□□□□ 0.75
TSPAN4-215ENST00000525334 GALR2O43603 387 aaPredicted RBP19.71■□□□□ 0.75
TSPAN4-215ENST00000525334 LRRN2O75325 713 aa19.71■□□□□ 0.75
TSPAN4-215ENST00000525334 TADA3O75528 432 aa19.71■□□□□ 0.75
TSPAN4-215ENST00000525334 RFX1P22670 979 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms