RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 GCP02774 474 aa5.35□□□□□ -1.55
CD44-215ENST00000525241 PPIFP30405 207 aaKnown RBP5.35□□□□□ -1.55
CD44-215ENST00000525241 FOLR3P41439 243 aa5.35□□□□□ -1.55
CD44-215ENST00000525241 DPTQ07507 201 aa5.35□□□□□ -1.55
CD44-215ENST00000525241 MPP3Q13368 585 aa5.35□□□□□ -1.55
CD44-215ENST00000525241 MAP9Q49MG5 647 aa5.35□□□□□ -1.55
CD44-215ENST00000525241 PLA1AQ53H76 456 aa5.35□□□□□ -1.55
CD44-215ENST00000525241 SFRP4Q6FHJ7 346 aaPredicted RBP5.35□□□□□ -1.55
CD44-215ENST00000525241 ZDHHC24Q6UX98 284 aa5.35□□□□□ -1.55
CD44-215ENST00000525241 NOL8Q76FK4 1167 aaKnown RBP5.35□□□□□ -1.55
CD44-215ENST00000525241 B3GALNT2Q8NCR0 500 aa5.35□□□□□ -1.55
CD44-215ENST00000525241 SUPT20HQ8NEM7 779 aa5.35□□□□□ -1.55
CD44-215ENST00000525241 TOR1AIP2Q8NFQ8 470 aa5.35□□□□□ -1.55
CD44-215ENST00000525241 CAVIN3Q969G5 261 aa5.35□□□□□ -1.55
CD44-215ENST00000525241 FAM136AQ96C01 138 aa5.35□□□□□ -1.55
CD44-215ENST00000525241 PGBD1Q96JS3 809 aa5.35□□□□□ -1.55
CD44-215ENST00000525241 STRBPQ96SI9 672 aaKnown RBP5.35□□□□□ -1.55
CD44-215ENST00000525241 ACTRT3Q9BYD9 372 aa5.35□□□□□ -1.55
CD44-215ENST00000525241 TPSD1Q9BZJ3 242 aa5.35□□□□□ -1.55
CD44-215ENST00000525241 TOR3AQ9H497 397 aa5.35□□□□□ -1.55
CD44-215ENST00000525241 RGS17Q9UGC6 210 aaPredicted RBP5.35□□□□□ -1.55
CD44-215ENST00000525241 CORO2BQ9UQ03 480 aa5.35□□□□□ -1.55
CD44-215ENST00000525241 TBC1D30Q9Y2I9 924 aa5.35□□□□□ -1.55
CD44-215ENST00000525241 MRPS17Q9Y2R5 130 aaKnown RBP5.35□□□□□ -1.55
CD44-215ENST00000525241 WDR27A2RRH5 827 aa5.34□□□□□ -1.55
CD44-215ENST00000525241 RHPN2P1A8MT19 583 aa5.34□□□□□ -1.55
CD44-215ENST00000525241 VWC2LB2RUY7 222 aa5.34□□□□□ -1.55
CD44-215ENST00000525241 PEX1O43933 1283 aa5.34□□□□□ -1.55
CD44-215ENST00000525241 IL1R1P14778 569 aa5.34□□□□□ -1.55
CD44-215ENST00000525241 PROZP22891 400 aa5.34□□□□□ -1.55
CD44-215ENST00000525241 KLRC1P26715 233 aa5.34□□□□□ -1.55
CD44-215ENST00000525241 LRPAP1P30533 357 aa5.34□□□□□ -1.55
CD44-215ENST00000525241 NXPH1P58417 271 aa5.34□□□□□ -1.55
CD44-215ENST00000525241 HTRA4P83105 476 aaPredicted RBP5.34□□□□□ -1.55
CD44-215ENST00000525241 ITIH3Q06033 890 aa5.34□□□□□ -1.55
CD44-215ENST00000525241 ZNF543Q08ER8 600 aa5.34□□□□□ -1.55
CD44-215ENST00000525241 MYO1EQ12965 1108 aa5.34□□□□□ -1.55
CD44-215ENST00000525241 PTPRRQ15256 657 aa5.34□□□□□ -1.55
CD44-215ENST00000525241 ARHGAP40Q5TG30 622 aa5.34□□□□□ -1.55
CD44-215ENST00000525241 ICE2Q659A1 982 aa5.34□□□□□ -1.55
CD44-215ENST00000525241 MRGPRGQ86SM5 289 aa5.34□□□□□ -1.55
CD44-215ENST00000525241 SPSB4Q96A44 273 aa5.34□□□□□ -1.55
CD44-215ENST00000525241 PCGF6Q9BYE7 350 aa5.34□□□□□ -1.55
CD44-215ENST00000525241 UNKQ9C0B0 810 aaKnown RBP5.34□□□□□ -1.55
CD44-215ENST00000525241 SERHLQ9NQF3 203 aa5.34□□□□□ -1.55
CD44-215ENST00000525241 XPNPEP3Q9NQH7 507 aa5.34□□□□□ -1.55
CD44-215ENST00000525241 PACSIN3Q9UKS6 424 aa5.34□□□□□ -1.55
CD44-215ENST00000525241 NDRG4Q9ULP0 352 aaKnown RBP5.34□□□□□ -1.55
CD44-215ENST00000525241 SNX13Q9Y5W8 968 aa5.34□□□□□ -1.55
CD44-215ENST00000525241 ADGRA2Q96PE1 1338 aa5.33□□□□□ -1.56
CD44-215ENST00000525241 FOXN3O00409 490 aaPredicted RBP5.33□□□□□ -1.56
CD44-215ENST00000525241 PPM1DO15297 605 aa5.33□□□□□ -1.56
CD44-215ENST00000525241 MPPED1O15442 326 aa5.33□□□□□ -1.56
CD44-215ENST00000525241 RAMP2O60895 175 aa5.33□□□□□ -1.56
CD44-215ENST00000525241 CSF1RP07333 972 aa5.33□□□□□ -1.56
CD44-215ENST00000525241 RHOP08100 348 aa5.33□□□□□ -1.56
CD44-215ENST00000525241 PRIM2P49643 509 aa5.33□□□□□ -1.56
CD44-215ENST00000525241 CASP5P51878 434 aa5.33□□□□□ -1.56
CD44-215ENST00000525241 DGKEP52429 567 aa5.33□□□□□ -1.56
CD44-215ENST00000525241 INHBCP55103 352 aa5.33□□□□□ -1.56
CD44-215ENST00000525241 SP2Q02086 613 aa5.33□□□□□ -1.56
CD44-215ENST00000525241 FSTL1Q12841 308 aa5.33□□□□□ -1.56
CD44-215ENST00000525241 MGAT5BQ3V5L5 792 aa5.33□□□□□ -1.56
CD44-215ENST00000525241 IL31Q6EBC2 164 aa5.33□□□□□ -1.56
CD44-215ENST00000525241 RGS7BPQ6MZT1 257 aaPredicted RBP5.33□□□□□ -1.56
CD44-215ENST00000525241 C11orf96Q7Z7L8 435 aa5.33□□□□□ -1.56
CD44-215ENST00000525241 FBXL20Q96IG2 436 aa5.33□□□□□ -1.56
CD44-215ENST00000525241 SORCS2Q96PQ0 1159 aa5.33□□□□□ -1.56
CD44-215ENST00000525241 TBCBQ99426 244 aa5.33□□□□□ -1.56
CD44-215ENST00000525241 STK31Q9BXU1 1019 aa5.33□□□□□ -1.56
CD44-215ENST00000525241 CHST8Q9H2A9 424 aa5.33□□□□□ -1.56
CD44-215ENST00000525241 CXorf36Q9H7Y0 433 aa5.33□□□□□ -1.56
CD44-215ENST00000525241 ALG13Q9NP73 1137 aaKnown RBP5.33□□□□□ -1.56
CD44-215ENST00000525241 SERTAD3Q9UJW9 196 aa5.33□□□□□ -1.56
CD44-215ENST00000525241 A0A087X1B8 175 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 ADM5C9JUS6 153 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 KPNA5O15131 536 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 IL18RAPO95256 599 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 CHRM2P08172 466 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 PDHA1P08559 390 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 MYL3P08590 195 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 NBPF7P0C2Y1 421 aaPredicted RBP5.32□□□□□ -1.56
CD44-215ENST00000525241 TYRP1P17643 537 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 KCNA3P22001 575 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 PLA2G5P39877 138 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 KRT17Q04695 432 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 DAG1Q14118 895 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 E2F2Q14209 437 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 TXNRD1Q16881 649 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 UNC13DQ70J99 1090 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 DTX2Q86UW9 622 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 CCDC146Q8IYE0 955 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 BPIFB1Q8TDL5 484 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 TFAP2BQ92481 460 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 BRIP1Q9BX63 1249 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 IKZF4Q9H2S9 585 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 CHST12Q9NRB3 414 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 KLC4Q9NSK0 619 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 ZSCAN32Q9NX65 697 aa5.32□□□□□ -1.56
CD44-215ENST00000525241 FOXJ2Q9P0K8 574 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms