RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 COBLL1Q53SF7 1204 aa13.44□□□□□ -0.26
SMCO4-202ENST00000525141 ZNF658Q5TYW1 1059 aaPredicted RBP13.44□□□□□ -0.26
SMCO4-202ENST00000525141 ZNF852Q6ZMS4 543 aa13.44□□□□□ -0.26
SMCO4-202ENST00000525141 DPH6Q7L8W6 267 aa13.44□□□□□ -0.26
SMCO4-202ENST00000525141 ITIH5Q86UX2 942 aa13.44□□□□□ -0.26
SMCO4-202ENST00000525141 WDR49Q8IV35 697 aa13.44□□□□□ -0.26
SMCO4-202ENST00000525141 TMEM86AQ8N2M4 240 aa13.44□□□□□ -0.26
SMCO4-202ENST00000525141 XXYLT1Q8NBI6 393 aa13.44□□□□□ -0.26
SMCO4-202ENST00000525141 DEPDC1BQ8WUY9 529 aa13.44□□□□□ -0.26
SMCO4-202ENST00000525141 IRF7Q92985 503 aa13.44□□□□□ -0.26
SMCO4-202ENST00000525141 ANKRD36BP1Q96IX9 119 aa13.44□□□□□ -0.26
SMCO4-202ENST00000525141 NELL2Q99435 816 aa13.44□□□□□ -0.26
SMCO4-202ENST00000525141 SMG9Q9H0W8 520 aaKnown RBP13.44□□□□□ -0.26
SMCO4-202ENST00000525141 KCTD10Q9H3F6 313 aa13.44□□□□□ -0.26
SMCO4-202ENST00000525141 TASP1Q9H6P5 420 aa13.44□□□□□ -0.26
SMCO4-202ENST00000525141 CRTAC1Q9NQ79 661 aa13.44□□□□□ -0.26
SMCO4-202ENST00000525141 R4GN57 208 aa13.44□□□□□ -0.26
SMCO4-202ENST00000525141 MIA3Q5JRA6 1907 aa13.44□□□□□ -0.26
SMCO4-202ENST00000525141 ZNF263O14978 683 aa13.43□□□□□ -0.26
SMCO4-202ENST00000525141 CHADO15335 359 aa13.43□□□□□ -0.26
SMCO4-202ENST00000525141 PRAMEF12O95522 483 aa13.43□□□□□ -0.26
SMCO4-202ENST00000525141 PDGFRBP09619 1106 aa13.43□□□□□ -0.26
SMCO4-202ENST00000525141 RFX1P22670 979 aa13.43□□□□□ -0.26
SMCO4-202ENST00000525141 LHX1P48742 406 aa13.43□□□□□ -0.26
SMCO4-202ENST00000525141 CASP4P49662 377 aa13.43□□□□□ -0.26
SMCO4-202ENST00000525141 NLRP12P59046 1061 aa13.43□□□□□ -0.26
SMCO4-202ENST00000525141 SLC9A9Q8IVB4 645 aa13.43□□□□□ -0.26
SMCO4-202ENST00000525141 FANCMQ8IYD8 2048 aa13.43□□□□□ -0.26
SMCO4-202ENST00000525141 RIN3Q8TB24 985 aa13.43□□□□□ -0.26
SMCO4-202ENST00000525141 FAM200AQ8TCP9 573 aa13.43□□□□□ -0.26
SMCO4-202ENST00000525141 E2F7Q96AV8 911 aa13.43□□□□□ -0.26
SMCO4-202ENST00000525141 CCDC127Q96BQ5 260 aa13.43□□□□□ -0.26
SMCO4-202ENST00000525141 ZFYVE19Q96K21 471 aa13.43□□□□□ -0.26
SMCO4-202ENST00000525141 MRPL45Q9BRJ2 306 aaKnown RBP13.43□□□□□ -0.26
SMCO4-202ENST00000525141 TRAF3IP3Q9Y228 551 aa13.43□□□□□ -0.26
SMCO4-202ENST00000525141 EP300Q09472 2414 aaPredicted RBP13.43□□□□□ -0.26
SMCO4-202ENST00000525141 TICRRQ7Z2Z1 1910 aa13.43□□□□□ -0.26
SMCO4-202ENST00000525141 CFAP54Q96N23 3096 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 SLC38A8A6NNN8 435 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 NOL4O94818 638 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 FGF19O95750 216 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 TNNC2P02585 160 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 C4BPAP04003 597 aaKnown RBP13.42□□□□□ -0.26
SMCO4-202ENST00000525141 DLATP10515 647 aaKnown RBP13.42□□□□□ -0.26
SMCO4-202ENST00000525141 CHRNB1P11230 501 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 WARSP23381 471 aaKnown RBP13.42□□□□□ -0.26
SMCO4-202ENST00000525141 SOX9P48436 509 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 MLLT6P55198 1093 aaPredicted RBP13.42□□□□□ -0.26
SMCO4-202ENST00000525141 CLDN10P78369 228 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 MYL7Q01449 175 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 TSPY1Q01534 308 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 GAS6Q14393 721 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 NFE2Q16621 373 aaPredicted RBP13.42□□□□□ -0.26
SMCO4-202ENST00000525141 TXNDC8Q6A555 127 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 TXNDC11Q6PKC3 985 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 ADGRF2Q8IZF7 708 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 TTC8Q8TAM2 541 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 SPATA18Q8TC71 538 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 FAM3CQ92520 227 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 NELL1Q92832 810 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 ERCC4Q92889 916 aaPredicted RBP13.42□□□□□ -0.26
SMCO4-202ENST00000525141 ELMO3Q96BJ8 720 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 MYRFLQ96LU7 910 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 CGRRF1Q99675 332 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 BCO2Q9BYV7 579 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 XYLT2Q9H1B5 865 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 SLITRK6Q9H5Y7 841 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 LMAN1LQ9HAT1 526 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 ABCB6Q9NP58 842 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 OBP2AQ9NY56 170 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 KIAA1468Q9P260 1216 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 CCL26Q9Y258 94 aa13.42□□□□□ -0.26
SMCO4-202ENST00000525141 GREB1Q4ZG55 1949 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 MAN2B1O00754 1011 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 CALUO43852 315 aaPredicted RBP13.41□□□□□ -0.26
SMCO4-202ENST00000525141 TADA3O75528 432 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 VNN1O95497 513 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 FAM163BP0C2L3 166 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 TNNI1P19237 187 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 CCNE1P24864 410 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 GNL1P36915 607 aaPredicted RBP13.41□□□□□ -0.26
SMCO4-202ENST00000525141 PPP1R2P41236 205 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 PRCPP42785 496 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 RPS9P46781 194 aaKnown RBP13.41□□□□□ -0.26
SMCO4-202ENST00000525141 MYL6P60660 151 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 DLG4P78352 724 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 TNK2Q07912 1038 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 MYO1EQ12965 1108 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 MTAPQ13126 283 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 VEPH1Q14D04 833 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 NFIL3Q16649 462 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 CFAP221Q4G0U5 840 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 C1orf220Q5T0J3 134 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 MON1AQ86VX9 555 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 CMTM8Q8IZV2 173 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 MAB21L3Q8N8X9 362 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 TRIML1Q8N9V2 468 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 PARD3BQ8TEW8 1205 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 USP13Q92995 863 aaPredicted RBP13.41□□□□□ -0.26
SMCO4-202ENST00000525141 NKD2Q969F2 451 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms