RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 BMPR2Q13873 1038 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 WDR44Q5JSH3 913 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 TAS1R3Q7RTX0 852 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 PRPF39Q86UA1 669 aaKnown RBP13.82□□□□□ -0.2
CAPN1-202ENST00000524773 C12orf56Q8IXR9 622 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 SH3TC2Q8TF17 1288 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 THTPAQ9BU02 230 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 TRIM4Q9C037 500 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 HAPLN2Q9GZV7 340 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 AVENQ9NQS1 362 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-202ENST00000524773 ARHGEF4Q9NR80 690 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 PCMTD2Q9NV79 361 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 ETAA1Q9NY74 926 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 AGTPBP1Q9UPW5 1226 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 TNS1Q9HBL0 1735 aaKnown RBP13.81□□□□□ -0.2
CAPN1-202ENST00000524773 ECE2O60344 883 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 UGT1A9O60656 530 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 STK10O94804 968 aaKnown RBP13.81□□□□□ -0.2
CAPN1-202ENST00000524773 ACO1P21399 889 aaKnown RBP13.81□□□□□ -0.2
CAPN1-202ENST00000524773 GTF2H1P32780 548 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 ALDH18A1P54886 795 aaKnown RBP13.81□□□□□ -0.2
CAPN1-202ENST00000524773 AOC3Q16853 763 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 KBTBD12Q3ZCT8 623 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 HSF5Q4G112 596 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-202ENST00000524773 CC2D2BQ6DHV5 1058 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 NPNTQ6UXI9 565 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 MAP4K3Q8IVH8 894 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 CTAGE3PQ8IX95 158 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 GPD1LQ8N335 351 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 FBXO41Q8TF61 875 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 MFSD14AQ96MC6 490 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 TUBGCP5Q96RT8 1024 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 RIT2Q99578 217 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 UGT1A7Q9HAW7 530 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 UGT1A10Q9HAW8 530 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 UGT1A8Q9HAW9 530 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.81□□□□□ -0.2
CAPN1-202ENST00000524773 WDR35Q9P2L0 1181 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 PPARGC1AQ9UBK2 798 aaKnown RBP13.81□□□□□ -0.2
CAPN1-202ENST00000524773 RBBP6Q7Z6E9 1792 aaKnown RBP13.81□□□□□ -0.2
CAPN1-202ENST00000524773 F5H423 210 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-202ENST00000524773 CST8O60676 142 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 TJP3O95049 919 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 MT-ND3P03897 115 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 CALRP27797 417 aaKnown RBP13.81□□□□□ -0.2
CAPN1-202ENST00000524773 VCPP55072 806 aaKnown RBP13.81□□□□□ -0.2
CAPN1-202ENST00000524773 PTP4A2Q12974 167 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 RASA2Q15283 850 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 OASLQ15646 514 aaKnown RBP13.81□□□□□ -0.2
CAPN1-202ENST00000524773 RAB6CQ53S08 254 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 DACT2Q5SW24 774 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 IZUMO2Q6UXV1 221 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 ABRAQ8N0Z2 381 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 RIBC1Q8N443 379 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-202ENST00000524773 BANPQ8N9N5 519 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 DCAKDQ8WVC6 231 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 TMEM143Q96AN5 459 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 CFAP36Q96G28 342 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 FGD4Q96M96 766 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 SENP7Q9BQF6 1050 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 IDI2Q9BXS1 227 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 RAB6CQ9H0N0 254 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 RANBP17Q9H2T7 1088 aaKnown RBP13.81□□□□□ -0.2
CAPN1-202ENST00000524773 GABBR1Q9UBS5 961 aa13.81□□□□□ -0.2
CAPN1-202ENST00000524773 DCAF8L1A6NGE4 600 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 TRAFD1O14545 582 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-202ENST00000524773 ZNF862O60290 1169 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 NPTXRO95502 500 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 DLDP09622 509 aaKnown RBP13.8□□□□□ -0.2
CAPN1-202ENST00000524773 RPL22P35268 128 aaKnown RBP13.8□□□□□ -0.2
CAPN1-202ENST00000524773 YWHAGP61981 247 aaKnown RBP eCLIP13.8□□□□□ -0.2
CAPN1-202ENST00000524773 PEX6Q13608 980 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 UBAP2LQ14157 1087 aaKnown RBP13.8□□□□□ -0.2
CAPN1-202ENST00000524773 EFHC2Q5JST6 749 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 RGS9BPQ6ZS82 235 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 RELL1Q8IUW5 271 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 RBM15BQ8NDT2 890 aaKnown RBP13.8□□□□□ -0.2
CAPN1-202ENST00000524773 CFAP61Q8NHU2 1237 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 VTI1AQ96AJ9 217 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 ZNF668Q96K58 619 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-202ENST00000524773 CAMKK2Q96RR4 588 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 MMP19Q99542 508 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 MOV10L1Q9BXT6 1211 aaKnown RBP13.8□□□□□ -0.2
CAPN1-202ENST00000524773 TLE6Q9H808 572 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 STK32BQ9NY57 414 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 LNPEPQ9UIQ6 1025 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 PPM1HQ9ULR3 514 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 LRCH1Q9Y2L9 728 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 hCG_1818297A0A087WSY0 165 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 WEE2P0C1S8 567 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 SPATA31D3P0C874 917 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 MAPTP10636 758 aaKnown RBP13.8□□□□□ -0.2
CAPN1-202ENST00000524773 IL1R2P27930 398 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 ELK3P41970 407 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 GCNT1Q02742 428 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 PTK7Q13308 1070 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 SPATA31D4Q6ZUB0 917 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 ARID3BQ8IVW6 561 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-202ENST00000524773 MZB1Q8WU39 189 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 TMEM39BQ9GZU3 492 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms