RNA–Protein interactions for RNA: ENST00000524654.1

CTSB-207, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-207ENST00000524654 SHISA7A6NL88 538 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 HEPACAM2A8MVW5 462 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 ARNTLO00327 626 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 STK25O00506 426 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 CSH1P0DML2 217 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 CSH2P0DML3 217 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 RPL13P26373 211 aaKnown RBP11.73□□□□□ -0.53
CTSB-207ENST00000524654 PRCPP42785 496 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 VAMP7P51809 220 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 CYP4F8P98187 520 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 ADAM9Q13443 819 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 SGSM1Q2NKQ1 1148 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 ZNF699Q32M78 642 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 ARHGAP15Q53QZ3 475 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 GPR158Q5T848 1215 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 ZNF658Q5TYW1 1059 aaPredicted RBP11.73□□□□□ -0.53
CTSB-207ENST00000524654 VSTM1Q6UX27 236 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 MUC6Q6W4X9 2439 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 INTS8Q75QN2 995 aaKnown RBP11.73□□□□□ -0.53
CTSB-207ENST00000524654 SV2AQ7L0J3 742 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 KMT2EQ8IZD2 1858 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 STKLD1Q8NE28 680 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 PJA1Q8NG27 643 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 OR6B3Q8NGW1 331 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 IRF7Q92985 503 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 MYLPFQ96A32 169 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 PCED1BQ96HM7 432 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 CEP295NLQ96MC4 621 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 LRRC3BQ96PB8 259 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 SLC46A2Q9BY10 475 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 FOXQ1Q9C009 403 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 BRD9Q9H8M2 597 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 HEBP1Q9NRV9 189 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 MAGEC2Q9UBF1 373 aaPredicted RBP11.73□□□□□ -0.53
CTSB-207ENST00000524654 ZMYM5Q9UJ78 669 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 SIT1Q9Y3P8 196 aa11.73□□□□□ -0.53
CTSB-207ENST00000524654 SLC38A8A6NNN8 435 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 SOBPA7XYQ1 873 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 H0Y858 1186 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 SMC2O95347 1197 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 PRAMEF12O95522 483 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 ASS1P00966 412 aaKnown RBP11.72□□□□□ -0.53
CTSB-207ENST00000524654 GLULP15104 373 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 PTPN1P18031 435 aaKnown RBP11.72□□□□□ -0.53
CTSB-207ENST00000524654 RFX1P22670 979 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 BDNFP23560 247 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 GDI1P31150 447 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 HOXD11P31277 338 aaPredicted RBP11.72□□□□□ -0.53
CTSB-207ENST00000524654 PSMC2P35998 433 aaKnown RBP11.72□□□□□ -0.53
CTSB-207ENST00000524654 CDH8P55286 799 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 ZNF667Q5HYK9 610 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 MDH1BQ5I0G3 518 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 FAM186BQ8IYM0 893 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 CMTM8Q8IZV2 173 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 DTWD2Q8NBA8 298 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 TAF4BQ92750 862 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 ERCC4Q92889 916 aaPredicted RBP11.72□□□□□ -0.53
CTSB-207ENST00000524654 ELMO3Q96BJ8 720 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 SPATA17Q96L03 361 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 GCNAQ96QF7 691 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 OSBPL6Q9BZF3 934 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 SDCBP2Q9H190 292 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 IRF2BPLQ9H1B7 796 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 DPEP3Q9H4B8 488 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 SMYD3Q9H7B4 428 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 OBP2AQ9NY56 170 aa11.72□□□□□ -0.53
CTSB-207ENST00000524654 HOOK1Q9UJC3 728 aaKnown RBP11.72□□□□□ -0.53
CTSB-207ENST00000524654 MAGED2Q9UNF1 606 aaPredicted RBP11.72□□□□□ -0.53
CTSB-207ENST00000524654 MTF2Q9Y483 593 aaPredicted RBP11.72□□□□□ -0.53
CTSB-207ENST00000524654 A8MXQ7 604 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 ZNF263O14978 683 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 CHADO15335 359 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 GADD45BO75293 160 aaPredicted RBP11.71□□□□□ -0.53
CTSB-207ENST00000524654 TADA3O75528 432 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 HLA-DRAP01903 254 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 DCNP07585 359 aaKnown RBP11.71□□□□□ -0.53
CTSB-207ENST00000524654 TRIM49P0CI25 452 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 TRIM49CP0CI26 452 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 KRT13P13646 458 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 CD72P21854 359 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 DDX6P26196 483 aaKnown RBP eCLIP11.71□□□□□ -0.53
CTSB-207ENST00000524654 RAP1GAPP47736 663 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 GCLMP48507 274 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 MLLT6P55198 1093 aaPredicted RBP11.71□□□□□ -0.53
CTSB-207ENST00000524654 CYP27A1Q02318 531 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 PPP3CAQ08209 521 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 TXNDC8Q6A555 127 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 TPRG1Q6ZUI0 275 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 MON1AQ86VX9 555 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 GPIHBP1Q8IV16 184 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 SCN4BQ8IWT1 228 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 ZC3H3Q8IXZ2 948 aaKnown RBP11.71□□□□□ -0.53
CTSB-207ENST00000524654 ADSSL1Q8N142 457 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 ZNF687Q8N1G0 1237 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 B3GALNT2Q8NCR0 500 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 SMARCE1Q969G3 411 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 EEF2KMTQ96G04 330 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 C8orf48Q96LL4 319 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 PHOX2BQ99453 314 aa11.71□□□□□ -0.53
CTSB-207ENST00000524654 GTPBP4Q9BZE4 634 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms