RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 WDR81Q562E7 1941 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 GPR32O75388 356 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 SHBGP04278 402 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 ATXN1P54253 815 aaKnown RBP12.39□□□□□ -0.43
PTPRK-216ENST00000524481 CUL1Q13616 776 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 GDF6Q6KF10 455 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-216ENST00000524481 PMF1Q6P1K2 205 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 ZNF467Q7Z7K2 595 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-216ENST00000524481 ARRDC4Q8NCT1 418 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 TRPV1Q8NER1 839 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 MGARPQ8TDB4 240 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 WHAMMQ8TF30 809 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 APBA2Q99767 749 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 ADAMTS10Q9H324 1103 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 FAM114A2Q9NRY5 505 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 TRMT13Q9NUP7 481 aaKnown RBP12.39□□□□□ -0.43
PTPRK-216ENST00000524481 IPPQ9Y573 584 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 TMEM191CA6NGB0 347 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 ATF2P15336 505 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 CD52P31358 61 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 CDH6P55285 790 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 FCGRTP55899 365 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 GNGT1P63211 74 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 SOX4Q06945 474 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-216ENST00000524481 C1QBPQ07021 282 aaKnown RBP12.38□□□□□ -0.43
PTPRK-216ENST00000524481 KCNA10Q16322 511 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 KYNUQ16719 465 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 FBXO47Q5MNV8 452 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 GLIS1Q8NBF1 620 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 RXFP2Q8WXD0 754 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 WNT8BQ93098 351 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 ANAPC5Q9UJX4 755 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 SLC45A1Q9Y2W3 748 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 KPNA7A9QM74 516 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 SPTLC1O15269 473 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 CILPO75339 1184 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 CSPG5O95196 566 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 GNAT1P11488 350 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 PURAQ00577 322 aaKnown RBP12.38□□□□□ -0.43
PTPRK-216ENST00000524481 KRT81Q14533 505 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 DENND2CQ68D51 928 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 PLEKHA7Q6IQ23 1121 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 DSTYKQ6XUX3 929 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 ZNF410Q86VK4 478 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 PHF13Q86YI8 300 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-216ENST00000524481 ADAM32Q8TC27 787 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 SLC2A14Q8TDB8 520 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 TMEM174Q8WUU8 243 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 DDX27Q96GQ7 796 aaKnown RBP12.38□□□□□ -0.43
PTPRK-216ENST00000524481 MAF1Q9H063 256 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 GJD2Q9UKL4 321 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 ZC3H4Q9UPT8 1303 aaKnown RBP12.38□□□□□ -0.43
PTPRK-216ENST00000524481 B3GAT3O94766 335 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 SREBF2Q12772 1141 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 GPS1Q13098 491 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 HADHQ16836 314 aaKnown RBP12.38□□□□□ -0.43
PTPRK-216ENST00000524481 TTMPQ5BVD1 217 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 APPL2Q8NEU8 664 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 PAAF1Q9BRP4 392 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 DDX23Q9BUQ8 820 aaKnown RBP12.38□□□□□ -0.43
PTPRK-216ENST00000524481 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.38□□□□□ -0.43
PTPRK-216ENST00000524481 RNF186Q9NXI6 227 aa12.38□□□□□ -0.43
PTPRK-216ENST00000524481 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.38□□□□□ -0.43
PTPRK-216ENST00000524481 DCDC2CA8MYV0 355 aa12.37□□□□□ -0.43
PTPRK-216ENST00000524481 IL1R2P27930 398 aa12.37□□□□□ -0.43
PTPRK-216ENST00000524481 SLC1A1P43005 524 aa12.37□□□□□ -0.43
PTPRK-216ENST00000524481 SCNN1GP51170 649 aa12.37□□□□□ -0.43
PTPRK-216ENST00000524481 ARSEP51690 589 aa12.37□□□□□ -0.43
PTPRK-216ENST00000524481 ITGA8P53708 1063 aa12.37□□□□□ -0.43
PTPRK-216ENST00000524481 PMS2P54278 862 aa12.37□□□□□ -0.43
PTPRK-216ENST00000524481 NME3Q13232 169 aa12.37□□□□□ -0.43
PTPRK-216ENST00000524481 P3H1Q32P28 736 aa12.37□□□□□ -0.43
PTPRK-216ENST00000524481 WSCD1Q658N2 575 aa12.37□□□□□ -0.43
PTPRK-216ENST00000524481 NPNTQ6UXI9 565 aa12.37□□□□□ -0.43
PTPRK-216ENST00000524481 ZNF572Q7Z3I7 529 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-216ENST00000524481 RAET1EQ8TD07 263 aa12.37□□□□□ -0.43
PTPRK-216ENST00000524481 CD101Q93033 1021 aa12.37□□□□□ -0.43
PTPRK-216ENST00000524481 AVENQ9NQS1 362 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-216ENST00000524481 FAM53CQ9NYF3 392 aa12.37□□□□□ -0.43
PTPRK-216ENST00000524481 MAGED2Q9UNF1 606 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-216ENST00000524481 PPME1Q9Y570 386 aa12.37□□□□□ -0.43
PTPRK-216ENST00000524481 NR2E3Q9Y5X4 410 aa12.37□□□□□ -0.43
PTPRK-216ENST00000524481 RBM47A0AV96 593 aaKnown RBP12.37□□□□□ -0.43
PTPRK-216ENST00000524481 MIPP30301 263 aa12.37□□□□□ -0.43
PTPRK-216ENST00000524481 GRM5P41594 1212 aa12.37□□□□□ -0.43
PTPRK-216ENST00000524481 BCAR1P56945 870 aa12.37□□□□□ -0.43
PTPRK-216ENST00000524481 CACNB2Q08289 660 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-216ENST00000524481 ZNF252P-AS1Q0IIN9 211 aa12.37□□□□□ -0.43
PTPRK-216ENST00000524481 FAM183BPQ6ZVS7 135 aa12.37□□□□□ -0.43
PTPRK-216ENST00000524481 APBB1IPQ7Z5R6 666 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-216ENST00000524481 SMIM35A0A1B0GVV1 85 aa12.36□□□□□ -0.43
PTPRK-216ENST00000524481 H7C0C1 242 aa12.36□□□□□ -0.43
PTPRK-216ENST00000524481 CYB561D2O14569 222 aa12.36□□□□□ -0.43
PTPRK-216ENST00000524481 HGSO14964 777 aaPredicted RBP12.36□□□□□ -0.43
PTPRK-216ENST00000524481 PRPSAP2O60256 369 aa12.36□□□□□ -0.43
PTPRK-216ENST00000524481 VDRP11473 427 aa12.36□□□□□ -0.43
PTPRK-216ENST00000524481 ATP5OP48047 213 aa12.36□□□□□ -0.43
PTPRK-216ENST00000524481 MAGOHP61326 146 aaKnown RBP12.36□□□□□ -0.43
PTPRK-216ENST00000524481 PTP4A2Q12974 167 aa12.36□□□□□ -0.43
PTPRK-216ENST00000524481 PTGISQ16647 500 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms