RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	RUSC1-AS1	Q66K80	236 aa		5.05	□□□□□ -1.6
PCM1-223	ENST00000524356	KRTAP5-4	Q6L8H1	288 aa		5.05	□□□□□ -1.6
PCM1-223	ENST00000524356	UNQ6494/PRO21346	Q6UXR6	183 aa		5.05	□□□□□ -1.6
PCM1-223	ENST00000524356	C1orf122	Q6ZSJ8	110 aa		5.05	□□□□□ -1.6
PCM1-223	ENST00000524356	CATIP	Q7Z7H3	387 aa		5.05	□□□□□ -1.6
PCM1-223	ENST00000524356	RASSF3	Q86WH2	238 aa		5.05	□□□□□ -1.6
PCM1-223	ENST00000524356	UNC5CL	Q8IV45	518 aa		5.05	□□□□□ -1.6
PCM1-223	ENST00000524356	IL17RE	Q8NFR9	667 aa		5.05	□□□□□ -1.6
PCM1-223	ENST00000524356	CHTF18	Q8WVB6	975 aa		5.05	□□□□□ -1.6
PCM1-223	ENST00000524356	SNRNP27	Q8WVK2	155 aa	Known RBP	5.05	□□□□□ -1.6
PCM1-223	ENST00000524356	MAGEB10	Q96LZ2	347 aa	Predicted RBP	5.05	□□□□□ -1.6
PCM1-223	ENST00000524356	GPR52	Q9Y2T5	361 aa		5.05	□□□□□ -1.6
PCM1-223	ENST00000524356	SLC45A1	Q9Y2W3	748 aa		5.05	□□□□□ -1.6
PCM1-223	ENST00000524356	C1orf167	Q5SNV9	1468 aa		5.05	□□□□□ -1.6
PCM1-223	ENST00000524356	ADGRL3	Q9HAR2	1447 aa		5.05	□□□□□ -1.6
PCM1-223	ENST00000524356	ARHGEF5	Q12774	1597 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	WASHC2A	Q641Q2	1341 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	hCG_1642624	A0A1W2PR95	340 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356		A6NCN8	305 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356		B4E1Z4	1266 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356		J3KRW8	73 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	XPOT	O43592	962 aa	Known RBP	5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	AP1G1	O43747	822 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	CTNND1	O60716	968 aa	Known RBP	5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	ULK1	O75385	1050 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	BMP15	O95972	392 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	ZBED1	O96006	694 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	KRTAP5-9	P26371	169 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	CHKA	P35790	457 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	MRPS35	P82673	323 aa	Known RBP	5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	ADCY2	Q08462	1091 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	C11orf87	Q6NUJ2	197 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	ARMC6	Q6NXE6	501 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	PGM2L1	Q6PCE3	622 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	KRT27	Q7Z3Y8	459 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	MYLK4	Q86YV6	388 aa	Predicted RBP	5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	TTC30B	Q8N4P2	665 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	MSL3	Q8N5Y2	521 aa	Known RBP	5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	IGSF22	Q8N9C0	903 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	ZBTB34	Q8NCN2	500 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	RNF169	Q8NCN4	708 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	FAM156A	Q8NDB6	213 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	ACTRT2	Q8TDY3	377 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	ZNF48	Q96MX3	618 aa	Predicted RBP	5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	FCRL4	Q96PJ5	515 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	ACO2	Q99798	780 aa	Known RBP	5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	CENPO	Q9BU64	300 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	KRTAP4-4	Q9BYR3	166 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	LRRC27	Q9C0I9	530 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	RSPH9	Q9H1X1	276 aa	Predicted RBP	5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	THG1L	Q9NWX6	298 aa	Known RBP	5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	ZNF580	Q9UK33	172 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	NOL7	Q9UMY1	257 aa	Known RBP	5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	PCDHGB6	Q9Y5F9	930 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	RALGAPB	Q86X10	1494 aa		5.04	□□□□□ -1.6
PCM1-223	ENST00000524356	DUOX2	Q9NRD8	1548 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	MANSC4	A6NHS7	340 aa	Predicted RBP	5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	TLR5	O60602	858 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	PQBP1	O60828	265 aa	Known RBP	5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	ELANE	P08246	267 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	VCAM1	P19320	739 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	GRK6	P43250	576 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	MAPK9	P45984	424 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	RXRG	P48443	463 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	FXR1	P51114	621 aa	Known RBP eCLIP	5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	MECP2	P51608	486 aa	Known RBP	5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	SSBP2	P81877	361 aa	Predicted RBP	5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	DUSP2	Q05923	314 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	TBX2	Q13207	712 aa	Predicted RBP	5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	FHL1	Q13642	323 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	LRRC32	Q14392	662 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	SRSF7	Q16629	238 aa	Known RBP eCLIP	5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	ALDH1L2	Q3SY69	923 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	CREB3L3	Q68CJ9	461 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	CFAP161	Q6P656	301 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	RSRC2	Q7L4I2	434 aa	Known RBP	5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	OVCH2	Q7RTZ1	564 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	SRGAP1	Q7Z6B7	1085 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	KRT77	Q7Z794	578 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	CMIP	Q8IY22	773 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	TEKT5	Q96M29	485 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	TBATA	Q96M53	351 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	CCDC138	Q96M89	665 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	NOL10	Q9BSC4	688 aa	Known RBP	5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	WAC	Q9BTA9	647 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	WDR12	Q9GZL7	423 aa	Known RBP	5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	MKS1	Q9NXB0	559 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	RRN3	Q9NYV6	651 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	LRIT1	Q9P2V4	623 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	GLI3	P10071	1580 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	PIK3R4	Q99570	1358 aa		5.03	□□□□□ -1.6
PCM1-223	ENST00000524356	MYOM2	P54296	1465 aa		5.02	□□□□□ -1.61
PCM1-223	ENST00000524356	TRIM75P	A6NK02	468 aa		5.02	□□□□□ -1.61
PCM1-223	ENST00000524356	RASA4B	C9J798	803 aa		5.02	□□□□□ -1.61
PCM1-223	ENST00000524356		M0R3H8	397 aa		5.02	□□□□□ -1.61
PCM1-223	ENST00000524356	RASA4	O43374	803 aa		5.02	□□□□□ -1.61
PCM1-223	ENST00000524356	GAS7	O60861	476 aa		5.02	□□□□□ -1.61
PCM1-223	ENST00000524356	OFD1	O75665	1012 aa		5.02	□□□□□ -1.61
PCM1-223	ENST00000524356	LY86	O95711	162 aa		5.02	□□□□□ -1.61
PCM1-223	ENST00000524356	ATP2A2	P16615	1042 aa	Known RBP	5.02	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms