RNA–Protein interactions for RNA: ENST00000524238.3

HMBOX1-211, Transcript of homeobox containing 1, humanhuman

TSL 2 BASIC

Gene HMBOX1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-211ENST00000524238 TTC39BQ5VTQ0 682 aaPredicted RBP7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 SLFN13Q68D06 897 aa7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 C1orf228Q6PIY5 440 aa7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 POTEAQ6S8J7 498 aa7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 C3orf62Q6ZUJ4 267 aa7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 PRUNE1Q86TP1 453 aa7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 WDR75Q8IWA0 830 aaKnown RBP7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 MARVELD2Q8N4S9 558 aa7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 GRAPLQ8TC17 118 aaPredicted RBP7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 HELQQ8TDG4 1101 aa7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 DCAKDQ8WVC6 231 aa7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 TTC17Q96AE7 1141 aa7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 TEKT3Q9BXF9 490 aa7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 NMUR2Q9GZQ4 415 aa7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 ZCWPW1Q9H0M4 648 aa7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 EBF3Q9H4W6 596 aa7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 CD209Q9NNX6 404 aa7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 C1orf112Q9NSG2 853 aa7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 PARVAQ9NVD7 372 aa7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 CNTN3Q9P232 1028 aa7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 CHORDC1Q9UHD1 332 aaPredicted RBP7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 RAB26Q9ULW5 256 aa7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 SNCAIPQ9Y6H5 919 aa7.88□□□□□ -1.15
HMBOX1-211ENST00000524238 STRCP1A6NGW2 1772 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 CLUHO75153 1309 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 IGLV3-22A0A075B6J6 115 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 SGK1O00141 431 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 CLPTM1O96005 669 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 HARSP12081 509 aaKnown RBP7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 KRT5P13647 590 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 IDO1P14902 403 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 GLRA2P23416 452 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 ACADVLP49748 655 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 GPX6P59796 221 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 ZNF200P98182 395 aaPredicted RBP7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 CBLBQ13191 982 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 PTK7Q13308 1070 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 TMED1Q13445 227 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 ITPK1Q13572 414 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 TFDP1Q14186 410 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 OASLQ15646 514 aaKnown RBP7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 TFDP3Q5H9I0 405 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 C1orf220Q5T0J3 134 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 ZFYVE27Q5T4F4 411 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 CC2D2BQ6DHV5 1058 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 PLEKHA7Q6IQ23 1121 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 SAMD1Q6SPF0 538 aaPredicted RBP7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 MON1BQ7L1V2 547 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 ARCQ7LC44 396 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 ZNF554Q86TJ5 538 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 PRPF39Q86UA1 669 aaKnown RBP7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 CPNE8Q86YQ8 564 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 FEZF2Q8TBJ5 459 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 DIS3LQ8TF46 1054 aaKnown RBP7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 RSPH1Q8WYR4 309 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 E2F7Q96AV8 911 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 RBM17Q96I25 401 aaKnown RBP7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 PRICKLE1Q96MT3 831 aaPredicted RBP7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 SLITRK1Q96PX8 696 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 FAM111AQ96PZ2 611 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 CCDC106Q9BWC9 280 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 PCIF1Q9H4Z3 704 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 DHX33Q9H6R0 707 aaKnown RBP7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 ARHGEF4Q9NR80 690 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 BTG4Q9NY30 223 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 C6orf203Q9P0P8 240 aaPredicted RBP7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 SLC17A7Q9P2U7 560 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 ZNF180Q9UJW8 692 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 ITGA11Q9UKX5 1188 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 DNPEPQ9ULA0 475 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 PAIP2BQ9ULR5 123 aaKnown RBP7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 ZNF510Q9Y2H8 683 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 WDR37Q9Y2I8 494 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 FARP1Q9Y4F1 1045 aaPredicted RBP7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 PCDHGA4Q9Y5G9 962 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 ZNFX1Q9P2E3 1918 aaKnown RBP7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 CNTNAP4Q9C0A0 1308 aa7.87□□□□□ -1.15
HMBOX1-211ENST00000524238 DENND3A2RUS2 1198 aa7.86□□□□□ -1.15
HMBOX1-211ENST00000524238 ARHGAP42A6NI28 874 aa7.86□□□□□ -1.15
HMBOX1-211ENST00000524238 TLR3O15455 904 aaKnown RBP7.86□□□□□ -1.15
HMBOX1-211ENST00000524238 HNRNPRO43390 633 aaKnown RBP7.86□□□□□ -1.15
HMBOX1-211ENST00000524238 FAM189A1O60320 539 aa7.86□□□□□ -1.15
HMBOX1-211ENST00000524238 KRT1P04264 644 aa7.86□□□□□ -1.15
HMBOX1-211ENST00000524238 CALB1P05937 261 aa7.86□□□□□ -1.15
HMBOX1-211ENST00000524238 SNRPAP09012 282 aaKnown RBP7.86□□□□□ -1.15
HMBOX1-211ENST00000524238 ZFXP17010 805 aaPredicted RBP7.86□□□□□ -1.15
HMBOX1-211ENST00000524238 ATF7P17544 494 aaPredicted RBP7.86□□□□□ -1.15
HMBOX1-211ENST00000524238 BGNP21810 368 aa7.86□□□□□ -1.15
HMBOX1-211ENST00000524238 PRDX6P30041 224 aa7.86□□□□□ -1.15
HMBOX1-211ENST00000524238 PSMD7P51665 324 aa7.86□□□□□ -1.15
HMBOX1-211ENST00000524238 ADARP55265 1226 aaKnown RBP7.86□□□□□ -1.15
HMBOX1-211ENST00000524238 TMPRSS15P98073 1019 aa7.86□□□□□ -1.15
HMBOX1-211ENST00000524238 KRT81Q14533 505 aa7.86□□□□□ -1.15
HMBOX1-211ENST00000524238 FASTKD3Q14CZ7 662 aaKnown RBP7.86□□□□□ -1.15
HMBOX1-211ENST00000524238 SNRNP35Q16560 246 aaKnown RBP7.86□□□□□ -1.15
HMBOX1-211ENST00000524238 WDR44Q5JSH3 913 aa7.86□□□□□ -1.15
HMBOX1-211ENST00000524238 MFSD14BQ5SR56 506 aa7.86□□□□□ -1.15
HMBOX1-211ENST00000524238 PADI6Q6TGC4 694 aa7.86□□□□□ -1.15
HMBOX1-211ENST00000524238 PHF13Q86YI8 300 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms