RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 GZMAP12544 262 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 NQO1P15559 274 aaKnown RBP8.29□□□□□ -1.08
SPIDR-223ENST00000524033 ATP2A2P16615 1042 aaKnown RBP8.29□□□□□ -1.08
SPIDR-223ENST00000524033 ABCB4P21439 1286 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 COMTP21964 271 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 IVDP26440 423 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 HOXA13P31271 388 aaPredicted RBP8.29□□□□□ -1.08
SPIDR-223ENST00000524033 RFC2P35250 354 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 GRM5P41594 1212 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 HSD17B4P51659 736 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 RABGGTBP53611 331 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 SLC8A3P57103 927 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 GPC5P78333 572 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 LMNB2Q03252 620 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 ARHGAP1Q07960 439 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 BNIP1Q12981 228 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 BFSP2Q13515 415 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 ALCAMQ13740 583 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 LAMC2Q13753 1193 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 CRYMQ14894 314 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 KCTD19Q17RG1 926 aaPredicted RBP8.29□□□□□ -1.08
SPIDR-223ENST00000524033 ZC2HC1CQ53FD0 456 aaPredicted RBP8.29□□□□□ -1.08
SPIDR-223ENST00000524033 PPP1R26Q5T8A7 1209 aaPredicted RBP8.29□□□□□ -1.08
SPIDR-223ENST00000524033 CCDC137Q6PK04 289 aaKnown RBP8.29□□□□□ -1.08
SPIDR-223ENST00000524033 STXBP4Q6ZWJ1 553 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 ASRGL1Q7L266 308 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 CPNE8Q86YQ8 564 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 DHX37Q8IY37 1157 aaKnown RBP8.29□□□□□ -1.08
SPIDR-223ENST00000524033 FAM71AQ8IYT1 594 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 SAMD3Q8N6K7 520 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 C7orf31Q8N865 590 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 ANKS4BQ8N8V4 417 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 GPATCH11Q8N954 259 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 GIMAP7Q8NHV1 300 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 PLEKHO2Q8TD55 490 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 CKAP2Q8WWK9 683 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 MIEF2Q96C03 454 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 VWCEQ96DN2 955 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 GAS2L1Q99501 681 aaPredicted RBP8.29□□□□□ -1.08
SPIDR-223ENST00000524033 COL25A1Q9BXS0 654 aaPredicted RBP8.29□□□□□ -1.08
SPIDR-223ENST00000524033 PRDM12Q9H4Q4 367 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 SAMD15Q9P1V8 674 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 WRAP73Q9P2S5 460 aaPredicted RBP8.29□□□□□ -1.08
SPIDR-223ENST00000524033 GTF3C4Q9UKN8 822 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 COL11A1P12107 1806 aaPredicted RBP8.29□□□□□ -1.08
SPIDR-223ENST00000524033 ADGRA3Q8IWK6 1321 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 SORBS3O60504 671 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 FTLP02792 175 aaPredicted RBP8.28□□□□□ -1.08
SPIDR-223ENST00000524033 MMP3P08254 477 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 IQCF3P0C7M6 154 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 POLR2MP0CAP2 368 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 TGFB3P10600 412 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 PYGMP11217 842 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 KRT13P13646 458 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 EZRP15311 586 aaKnown RBP8.28□□□□□ -1.08
SPIDR-223ENST00000524033 FGFR4P22455 802 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 IGFBP4P22692 258 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 SKIV2L2P42285 1042 aaKnown RBP8.28□□□□□ -1.08
SPIDR-223ENST00000524033 PDE6CP51160 858 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 FMO1Q01740 532 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 PPP3CAQ08209 521 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 PRPF4BQ13523 1007 aaKnown RBP8.28□□□□□ -1.08
SPIDR-223ENST00000524033 PTK6Q13882 451 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 CRTC2Q53ET0 693 aaPredicted RBP8.28□□□□□ -1.08
SPIDR-223ENST00000524033 RNF43Q68DV7 783 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 CGB2Q6NT52 195 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 HIBCHQ6NVY1 386 aaPredicted RBP8.28□□□□□ -1.08
SPIDR-223ENST00000524033 SYDE1Q6ZW31 735 aaPredicted RBP8.28□□□□□ -1.08
SPIDR-223ENST00000524033 TAOK1Q7L7X3 1001 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 HS2ST1Q7LGA3 356 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 ADAT2Q7Z6V5 191 aaKnown RBP8.28□□□□□ -1.08
SPIDR-223ENST00000524033 VSIG10LQ86VR7 867 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 RELL1Q8IUW5 271 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 KSR1Q8IVT5 923 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 MYCT1Q8N699 235 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 PPTC7Q8NI37 304 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 CYP2W1Q8TAV3 490 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 SHC3Q92529 594 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 N4BP2L2Q92802 583 aaPredicted RBP8.28□□□□□ -1.08
SPIDR-223ENST00000524033 PRMT1Q99873 361 aaKnown RBP8.28□□□□□ -1.08
SPIDR-223ENST00000524033 ELAC2Q9BQ52 826 aaKnown RBP8.28□□□□□ -1.08
SPIDR-223ENST00000524033 NKX2-4Q9H2Z4 354 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 CDC42EP4Q9H3Q1 356 aaKnown RBP8.28□□□□□ -1.08
SPIDR-223ENST00000524033 ST6GALNAC4Q9H4F1 302 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 ARHGEF3Q9NR81 526 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 PKD2L1Q9P0L9 805 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 CTTNBP2NLQ9P2B4 639 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 FRMD4BQ9Y2L6 1034 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 NEU2Q9Y3R4 380 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 USP15Q9Y4E8 981 aaPredicted RBP8.28□□□□□ -1.08
SPIDR-223ENST00000524033 PCDHA11Q9Y5I1 949 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 PARP14Q460N5 1801 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 EMSYQ7Z589 1322 aa8.28□□□□□ -1.08
SPIDR-223ENST00000524033 CUL9Q8IWT3 2517 aa8.27□□□□□ -1.09
SPIDR-223ENST00000524033 SFI1A8K8P3 1242 aa8.27□□□□□ -1.09
SPIDR-223ENST00000524033 HIP1RO75146 1068 aa8.27□□□□□ -1.09
SPIDR-223ENST00000524033 ATP2C2O75185 946 aa8.27□□□□□ -1.09
SPIDR-223ENST00000524033 RGS20O76081 388 aa8.27□□□□□ -1.09
SPIDR-223ENST00000524033 CCNB1P14635 433 aa8.27□□□□□ -1.09
SPIDR-223ENST00000524033 MYOGP15173 224 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms