RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 FAM124BQ9H5Z6 455 aaPredicted RBP13.35□□□□□ -0.27
CCNC-216ENST00000523961 TMEM63CQ9P1W3 806 aa13.35□□□□□ -0.27
CCNC-216ENST00000523961 LIMD1Q9UGP4 676 aa13.35□□□□□ -0.27
CCNC-216ENST00000523961 DOCK6Q96HP0 2047 aa13.34□□□□□ -0.27
CCNC-216ENST00000523961 FGF19O95750 216 aa13.34□□□□□ -0.27
CCNC-216ENST00000523961 MYL4P12829 197 aa13.34□□□□□ -0.27
CCNC-216ENST00000523961 LAMP2P13473 410 aa13.34□□□□□ -0.27
CCNC-216ENST00000523961 ALADP13716 330 aa13.34□□□□□ -0.27
CCNC-216ENST00000523961 BDNFP23560 247 aa13.34□□□□□ -0.27
CCNC-216ENST00000523961 STX1AQ16623 288 aa13.34□□□□□ -0.27
CCNC-216ENST00000523961 SLC5A9Q2M3M2 681 aa13.34□□□□□ -0.27
CCNC-216ENST00000523961 PRSS36Q5K4E3 855 aa13.34□□□□□ -0.27
CCNC-216ENST00000523961 ACOT1Q86TX2 421 aa13.34□□□□□ -0.27
CCNC-216ENST00000523961 IRF2BP1Q8IU81 584 aa13.34□□□□□ -0.27
CCNC-216ENST00000523961 SCN4BQ8IWT1 228 aa13.34□□□□□ -0.27
CCNC-216ENST00000523961 HS6ST3Q8IZP7 471 aa13.34□□□□□ -0.27
CCNC-216ENST00000523961 CRYBG2Q8N1P7 616 aa13.34□□□□□ -0.27
CCNC-216ENST00000523961 GIPC2Q8TF65 315 aa13.34□□□□□ -0.27
CCNC-216ENST00000523961 FGF13Q92913 245 aa13.34□□□□□ -0.27
CCNC-216ENST00000523961 TATDN2Q93075 761 aa13.34□□□□□ -0.27
CCNC-216ENST00000523961 LPIN3Q9BQK8 851 aa13.34□□□□□ -0.27
CCNC-216ENST00000523961 GDE1Q9NZC3 331 aa13.34□□□□□ -0.27
CCNC-216ENST00000523961 ATP8B3O60423 1300 aa13.34□□□□□ -0.27
CCNC-216ENST00000523961 DCXO43602 365 aa13.33□□□□□ -0.28
CCNC-216ENST00000523961 CILPO75339 1184 aa13.33□□□□□ -0.28
CCNC-216ENST00000523961 CSH1P0DML2 217 aa13.33□□□□□ -0.28
CCNC-216ENST00000523961 CSH2P0DML3 217 aa13.33□□□□□ -0.28
CCNC-216ENST00000523961 CD58P19256 250 aa13.33□□□□□ -0.28
CCNC-216ENST00000523961 TBXAS1P24557 533 aaPredicted RBP13.33□□□□□ -0.28
CCNC-216ENST00000523961 MTIF2P46199 727 aaKnown RBP13.33□□□□□ -0.28
CCNC-216ENST00000523961 YWHAEP62258 255 aaKnown RBP13.33□□□□□ -0.28
CCNC-216ENST00000523961 DDR2Q16832 855 aa13.33□□□□□ -0.28
CCNC-216ENST00000523961 KLHL40Q2TBA0 621 aa13.33□□□□□ -0.28
CCNC-216ENST00000523961 CAVIN1Q6NZI2 390 aaKnown RBP13.33□□□□□ -0.28
CCNC-216ENST00000523961 TMC8Q8IU68 726 aa13.33□□□□□ -0.28
CCNC-216ENST00000523961 NPAS3Q8IXF0 933 aa13.33□□□□□ -0.28
CCNC-216ENST00000523961 ENOX1Q8TC92 643 aaKnown RBP13.33□□□□□ -0.28
CCNC-216ENST00000523961 ING5Q8WYH8 240 aa13.33□□□□□ -0.28
CCNC-216ENST00000523961 NXPE3Q969Y0 559 aa13.33□□□□□ -0.28
CCNC-216ENST00000523961 TCEAL4Q96EI5 215 aa13.33□□□□□ -0.28
CCNC-216ENST00000523961 CEP295NLQ96MC4 621 aa13.33□□□□□ -0.28
CCNC-216ENST00000523961 NT5C1BQ96P26 610 aa13.33□□□□□ -0.28
CCNC-216ENST00000523961 NT5C1AQ9BXI3 368 aa13.33□□□□□ -0.28
CCNC-216ENST00000523961 LRRC3Q9BY71 257 aa13.33□□□□□ -0.28
CCNC-216ENST00000523961 ELOVL4Q9GZR5 314 aa13.33□□□□□ -0.28
CCNC-216ENST00000523961 IGSF9Q9P2J2 1179 aa13.33□□□□□ -0.28
CCNC-216ENST00000523961 MUTYHQ9UIF7 546 aa13.33□□□□□ -0.28
CCNC-216ENST00000523961 C5orf42Q9H799 3197 aa13.33□□□□□ -0.28
CCNC-216ENST00000523961 NOTCH4Q99466 2003 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 PI4K2BG5E9Z4 385 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 TRIM66O15016 1216 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 CEBPBP17676 345 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 ANXA13P27216 316 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 GRIK1P39086 918 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 CCR2P41597 374 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 GPR15P49685 360 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 CUL2Q13617 745 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 MAN2A1Q16706 1144 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 PTPN21Q16825 1174 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 SDHAF4Q5VUM1 108 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 MTSS1LQ765P7 747 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 EHBP1Q8NDI1 1231 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 LMO3Q8TAP4 145 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 SHKBP1Q8TBC3 707 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 GPR152Q8TDT2 470 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 KHSRPQ92945 711 aaKnown RBP eCLIP13.32□□□□□ -0.285e-7■■■■■ 27.9
CCNC-216ENST00000523961 MCRS1Q96EZ8 462 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 SPATA17Q96L03 361 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 GCNAQ96QF7 691 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 MED10Q9BTT4 135 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 B3GNT5Q9BYG0 378 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 ZNF518BQ9C0D4 1074 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 GPR88Q9GZN0 384 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 KCNK12Q9HB15 430 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 ZNF334Q9HCZ1 680 aaPredicted RBP13.32□□□□□ -0.28
CCNC-216ENST00000523961 CISHQ9NSE2 258 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 UXTQ9UBK9 157 aaPredicted RBP13.32□□□□□ -0.28
CCNC-216ENST00000523961 HMGXB4Q9UGU5 601 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 SORCS3Q9UPU3 1222 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 NFE2L3Q9Y4A8 694 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 BDP1A6H8Y1 2624 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 VCANP13611 3396 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 DOCK8Q8NF50 2099 aa13.32□□□□□ -0.28
CCNC-216ENST00000523961 A0A1W2PRU2 124 aa13.31□□□□□ -0.28
CCNC-216ENST00000523961 SLC38A8A6NNN8 435 aa13.31□□□□□ -0.28
CCNC-216ENST00000523961 ANHXE9PGG2 379 aa13.31□□□□□ -0.28
CCNC-216ENST00000523961 CLDN5O00501 218 aa13.31□□□□□ -0.28
CCNC-216ENST00000523961 MOSPD3O75425 235 aa13.31□□□□□ -0.28
CCNC-216ENST00000523961 NOL4O94818 638 aa13.31□□□□□ -0.28
CCNC-216ENST00000523961 LETM1O95202 739 aaPredicted RBP13.31□□□□□ -0.28
CCNC-216ENST00000523961 ASGR2P07307 311 aa13.31□□□□□ -0.28
CCNC-216ENST00000523961 HMGA1P17096 107 aaKnown RBP13.31□□□□□ -0.28
CCNC-216ENST00000523961 GABRR2P28476 465 aa13.31□□□□□ -0.28
CCNC-216ENST00000523961 CDC25CP30307 473 aa13.31□□□□□ -0.28
CCNC-216ENST00000523961 TYRO3Q06418 890 aa13.31□□□□□ -0.28
CCNC-216ENST00000523961 LRMPQ12912 555 aa13.31□□□□□ -0.28
CCNC-216ENST00000523961 ORC1Q13415 861 aa13.31□□□□□ -0.28
CCNC-216ENST00000523961 ARHGAP15Q53QZ3 475 aa13.31□□□□□ -0.28
CCNC-216ENST00000523961 C11orf57Q6ZUT1 292 aaPredicted RBP13.31□□□□□ -0.28
CCNC-216ENST00000523961 GAREM2Q75VX8 874 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms