RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 MAGEA9P43362 315 aa13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 OTUD4Q01804 1114 aaKnown RBP13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 CXCL17Q6UXB2 119 aa13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 C3orf62Q6ZUJ4 267 aa13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 HDAC7Q8WUI4 952 aa13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 ARFGEF2Q9Y6D5 1785 aa13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 PHRF1Q9P1Y6 1649 aaKnown RBP13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 PRRG1O14668 218 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 C1QBPQ07021 282 aaKnown RBP13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 RRP1BQ14684 758 aaKnown RBP13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 MUM1Q2TAK8 710 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 ACCSLQ4AC99 568 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 TRIM67Q6ZTA4 783 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 NUDCD3Q8IVD9 361 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 CNPY3Q9BT09 278 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 MTG1Q9BT17 334 aaPredicted RBP13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 ANKZF1Q9H8Y5 726 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 XPNPEP3Q9NQH7 507 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 BCAP29Q9UHQ4 241 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 BARX2Q9UMQ3 279 aaPredicted RBP13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 IGLV3-22A0A075B6J6 115 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 SPDYE5A6NIY4 337 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 MDH1P40925 334 aaKnown RBP13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 CLK2P49760 499 aaKnown RBP13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 PDK1Q15118 436 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 ZC3H15Q8WU90 426 aaKnown RBP13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 MAGEB5Q9BZ81 275 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 VCX3BQ9H321 246 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 STARD7Q9NQZ5 370 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 TXLNGQ9NUQ3 528 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 ITGA11Q9UKX5 1188 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 PJA2O43164 708 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 TNFSF9P41273 254 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 PRKCIP41743 596 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 COPS2P61201 443 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 RBBP5Q15291 538 aaKnown RBP13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 E2F5Q15329 346 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 TFDP3Q5H9I0 405 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 LRIG3Q6UXM1 1119 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 SLC9A9Q8IVB4 645 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 PIDD1Q9HB75 910 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 MYH2Q9UKX2 1941 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 UBA6A0AVT1 1052 aaPredicted RBP13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 MAFO75444 373 aaPredicted RBP13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 RECQL4O94761 1208 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 CHN1P15882 459 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 CALRP27797 417 aaKnown RBP13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 HSPA9P38646 679 aaKnown RBP13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 MAP3K7CLP57077 242 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 MDH1BQ5I0G3 518 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 EEF1DP3Q658K8 133 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 FOXR1Q6PIV2 292 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 GPR142Q7Z601 462 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 CEP120Q8N960 986 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 OR5B17Q8NGF7 314 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 KRT82Q9NSB4 513 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 PCDHB7Q9Y5E2 793 aa13.66□□□□□ -0.22
PCDHGB1-201ENST00000523390 SNED1Q8TER0 1413 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 TRPA1O75762 1119 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 NUMBP49757 651 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 CLNS1AP54105 237 aaKnown RBP13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 BMT2Q1RMZ1 405 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 SH2D4BQ5SQS7 431 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 TRIM68Q6AZZ1 485 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 C11orf63Q6NUN7 778 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 TAF2Q6P1X5 1199 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 NT5DC3Q86UY8 548 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 CHSY1Q86X52 802 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 MIB1Q86YT6 1006 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 ACTL9Q8TC94 416 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 TMEM134Q9H6X4 195 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 TCP11X1B4DZS4 312 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 B4GALT5O43286 388 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 PYGMP11217 842 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 CTCFP49711 727 aaPredicted RBP13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 ZNF280AP59817 542 aaPredicted RBP13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 PCSK7Q16549 785 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 C10orf120Q5SQS8 335 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 SCG3Q8WXD2 468 aaKnown RBP13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 TMEM121Q9BTD3 319 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 TSR3Q9UJK0 312 aaKnown RBP13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 USP18Q9UMW8 372 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 CFLARO15519 480 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 PGK1P00558 417 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 JAG1P78504 1218 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 NSUN2Q08J23 767 aaKnown RBP eCLIP13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 SNCBQ16143 134 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 MAP3K21Q5TCX8 1036 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 SPOCD1Q6ZMY3 1216 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 CLEC4DQ8WXI8 215 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 CDT1Q9H211 546 aa13.65□□□□□ -0.22
PCDHGB1-201ENST00000523390 ICE2Q659A1 982 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 EXD1Q8NHP7 514 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 SOCS4Q8WXH5 440 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 ALKBH8Q96BT7 664 aaKnown RBP13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 SLITRK1Q96PX8 696 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 PRMT1Q99873 361 aaKnown RBP13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 VCXQ9H320 206 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 A0A1B0GUA9 196 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 DPYSL4O14531 572 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms