RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ARHGAP29Q52LW3 1261 aa22.17■■□□□ 1.14
SDCBP-209ENST00000522243 LIMS2Q7Z4I7 341 aa22.17■■□□□ 1.14
SDCBP-209ENST00000522243 CMTM8Q8IZV2 173 aa22.17■■□□□ 1.14
SDCBP-209ENST00000522243 KIAA0895Q8NCT3 520 aa22.17■■□□□ 1.14
SDCBP-209ENST00000522243 MRPL45Q9BRJ2 306 aaKnown RBP22.17■■□□□ 1.14
SDCBP-209ENST00000522243 GZF1Q9H116 711 aaPredicted RBP22.17■■□□□ 1.14
SDCBP-209ENST00000522243 SEMA4AQ9H3S1 761 aa22.17■■□□□ 1.14
SDCBP-209ENST00000522243 ABCB6Q9NP58 842 aa22.17■■□□□ 1.14
SDCBP-209ENST00000522243 CRTAC1Q9NQ79 661 aa22.17■■□□□ 1.14
SDCBP-209ENST00000522243 EXOC1Q9NV70 894 aa22.17■■□□□ 1.14
SDCBP-209ENST00000522243 CMA1P23946 247 aa22.16■■□□□ 1.14
SDCBP-209ENST00000522243 WEE1P30291 646 aa22.16■■□□□ 1.14
SDCBP-209ENST00000522243 CASP4P49662 377 aa22.16■■□□□ 1.14
SDCBP-209ENST00000522243 KRT85P78386 507 aa22.16■■□□□ 1.14
SDCBP-209ENST00000522243 TNK2Q07912 1038 aa22.16■■□□□ 1.14
SDCBP-209ENST00000522243 FAM171BQ6P995 826 aa22.16■■□□□ 1.14
SDCBP-209ENST00000522243 C12orf56Q8IXR9 622 aa22.16■■□□□ 1.14
SDCBP-209ENST00000522243 CELF5Q8N6W0 485 aaKnown RBP22.16■■□□□ 1.14
SDCBP-209ENST00000522243 MRPS31Q92665 395 aaKnown RBP22.16■■□□□ 1.14
SDCBP-209ENST00000522243 MYLPFQ96A32 169 aa22.16■■□□□ 1.14
SDCBP-209ENST00000522243 CHRDQ9H2X0 955 aa22.16■■□□□ 1.14
SDCBP-209ENST00000522243 CGNQ9P2M7 1197 aaKnown RBP22.16■■□□□ 1.14
SDCBP-209ENST00000522243 CDH9Q9ULB4 789 aa22.16■■□□□ 1.14
SDCBP-209ENST00000522243 CCL26Q9Y258 94 aa22.16■■□□□ 1.14
SDCBP-209ENST00000522243 NME7Q9Y5B8 376 aa22.16■■□□□ 1.14
SDCBP-209ENST00000522243 TADA3O75528 432 aa22.15■■□□□ 1.14
SDCBP-209ENST00000522243 NOL4O94818 638 aa22.15■■□□□ 1.14
SDCBP-209ENST00000522243 CHRNB1P11230 501 aa22.15■■□□□ 1.14
SDCBP-209ENST00000522243 WARSP23381 471 aaKnown RBP22.15■■□□□ 1.14
SDCBP-209ENST00000522243 AVPR1AP37288 418 aa22.15■■□□□ 1.14
SDCBP-209ENST00000522243 CFAP221Q4G0U5 840 aa22.15■■□□□ 1.14
SDCBP-209ENST00000522243 TXNDC11Q6PKC3 985 aa22.15■■□□□ 1.14
SDCBP-209ENST00000522243 PLEKHO2Q8TD55 490 aa22.15■■□□□ 1.14
SDCBP-209ENST00000522243 C8orf33Q9H7E9 229 aaPredicted RBP22.15■■□□□ 1.14
SDCBP-209ENST00000522243 RBM12Q9NTZ6 932 aaKnown RBP22.15■■□□□ 1.14
SDCBP-209ENST00000522243 MAGEC2Q9UBF1 373 aaPredicted RBP22.15■■□□□ 1.14
SDCBP-209ENST00000522243 GREB1Q4ZG55 1949 aa22.14■■□□□ 1.14
SDCBP-209ENST00000522243 SPECC1L-ADORA2AF8WAN1 911 aa22.14■■□□□ 1.13
SDCBP-209ENST00000522243 BDNFP23560 247 aa22.14■■□□□ 1.13
SDCBP-209ENST00000522243 CTHP32929 405 aa22.14■■□□□ 1.13
SDCBP-209ENST00000522243 MYL6P60660 151 aa22.14■■□□□ 1.13
SDCBP-209ENST00000522243 CYP27A1Q02318 531 aa22.14■■□□□ 1.13
SDCBP-209ENST00000522243 TRPC3Q13507 836 aa22.14■■□□□ 1.13
SDCBP-209ENST00000522243 ZNF528Q3MIS6 628 aa22.14■■□□□ 1.13
SDCBP-209ENST00000522243 WDR72Q3MJ13 1102 aa22.14■■□□□ 1.13
SDCBP-209ENST00000522243 C4orf50Q6ZRC1 276 aa22.14■■□□□ 1.13
SDCBP-209ENST00000522243 OR6B3Q8NGW1 331 aa22.14■■□□□ 1.13
SDCBP-209ENST00000522243 USP13Q92995 863 aaPredicted RBP22.14■■□□□ 1.13
SDCBP-209ENST00000522243 FUBP3Q96I24 572 aaKnown RBP eCLIP22.14■■□□□ 1.13
SDCBP-209ENST00000522243 SNX25Q9H3E2 840 aa22.14■■□□□ 1.13
SDCBP-209ENST00000522243 TRPC7Q9HCX4 862 aa22.14■■□□□ 1.13
SDCBP-209ENST00000522243 GKN1Q9NS71 199 aa22.14■■□□□ 1.13
SDCBP-209ENST00000522243 THG1LQ9NWX6 298 aaKnown RBP22.14■■□□□ 1.13
SDCBP-209ENST00000522243 UXTQ9UBK9 157 aaPredicted RBP22.14■■□□□ 1.13
SDCBP-209ENST00000522243 ZMYM5Q9UJ78 669 aa22.14■■□□□ 1.13
SDCBP-209ENST00000522243 HPSEQ9Y251 543 aa22.14■■□□□ 1.13
SDCBP-209ENST00000522243 ZFHX2Q9C0A1 2572 aaPredicted RBP22.14■■□□□ 1.13
SDCBP-209ENST00000522243 KINO60870 393 aaKnown RBP22.13■■□□□ 1.13
SDCBP-209ENST00000522243 PHACTR2O75167 634 aa22.13■■□□□ 1.13
SDCBP-209ENST00000522243 DDX6P26196 483 aaKnown RBP eCLIP22.13■■□□□ 1.13
SDCBP-209ENST00000522243 GNL1P36915 607 aaPredicted RBP22.13■■□□□ 1.13
SDCBP-209ENST00000522243 GRIK1P39086 918 aa22.13■■□□□ 1.13
SDCBP-209ENST00000522243 SYKP43405 635 aa22.13■■□□□ 1.13
SDCBP-209ENST00000522243 MLLT6P55198 1093 aaPredicted RBP22.13■■□□□ 1.13
SDCBP-209ENST00000522243 TNNC1P63316 161 aa22.13■■□□□ 1.13
SDCBP-209ENST00000522243 WDR44Q5JSH3 913 aa22.13■■□□□ 1.13
SDCBP-209ENST00000522243 MON1AQ86VX9 555 aa22.13■■□□□ 1.13
SDCBP-209ENST00000522243 ELMO3Q96BJ8 720 aa22.13■■□□□ 1.13
SDCBP-209ENST00000522243 PRMT8Q9NR22 394 aaPredicted RBP22.13■■□□□ 1.13
SDCBP-209ENST00000522243 NXF1Q9UBU9 619 aaKnown RBP22.13■■□□□ 1.13
SDCBP-209ENST00000522243 USP25Q9UHP3 1055 aa22.13■■□□□ 1.13
SDCBP-209ENST00000522243 PTPRDP23468 1912 aa22.13■■□□□ 1.13
SDCBP-209ENST00000522243 ANAPC1Q9H1A4 1944 aa22.12■■□□□ 1.13
SDCBP-209ENST00000522243 CLSTN1O94985 981 aa22.12■■□□□ 1.13
SDCBP-209ENST00000522243 PRR29P0C7W0 189 aa22.12■■□□□ 1.13
SDCBP-209ENST00000522243 NDUFA8P51970 172 aa22.12■■□□□ 1.13
SDCBP-209ENST00000522243 PLCB2Q00722 1185 aa22.12■■□□□ 1.13
SDCBP-209ENST00000522243 PSMD2Q13200 908 aa22.12■■□□□ 1.13
SDCBP-209ENST00000522243 BIRC3Q13489 604 aa22.12■■□□□ 1.13
SDCBP-209ENST00000522243 PON2Q15165 354 aa22.12■■□□□ 1.13
SDCBP-209ENST00000522243 MDH1BQ5I0G3 518 aa22.12■■□□□ 1.13
SDCBP-209ENST00000522243 TRIM68Q6AZZ1 485 aa22.12■■□□□ 1.13
SDCBP-209ENST00000522243 RALGPS2Q86X27 583 aaPredicted RBP22.12■■□□□ 1.13
SDCBP-209ENST00000522243 TTC16Q8NEE8 873 aa22.12■■□□□ 1.13
SDCBP-209ENST00000522243 RIN3Q8TB24 985 aa22.12■■□□□ 1.13
SDCBP-209ENST00000522243 GOLGA5Q8TBA6 731 aa22.12■■□□□ 1.13
SDCBP-209ENST00000522243 ATRIPQ8WXE1 791 aa22.12■■□□□ 1.13
SDCBP-209ENST00000522243 TRMT2BQ96GJ1 504 aaKnown RBP22.12■■□□□ 1.13
SDCBP-209ENST00000522243 MSANTD3Q96H12 275 aa22.12■■□□□ 1.13
SDCBP-209ENST00000522243 PCED1BQ96HM7 432 aa22.12■■□□□ 1.13
SDCBP-209ENST00000522243 MYRFLQ96LU7 910 aa22.12■■□□□ 1.13
SDCBP-209ENST00000522243 TDP1Q9NUW8 608 aa22.12■■□□□ 1.13
SDCBP-209ENST00000522243 USP34Q70CQ2 3546 aa22.12■■□□□ 1.13
SDCBP-209ENST00000522243 F5P12259 2224 aa22.11■■□□□ 1.13
SDCBP-209ENST00000522243 LRRIQ3A6PVS8 624 aaPredicted RBP22.11■■□□□ 1.13
SDCBP-209ENST00000522243 TACC1O75410 805 aa22.11■■□□□ 1.13
SDCBP-209ENST00000522243 RPN1P04843 607 aaKnown RBP22.11■■□□□ 1.13
SDCBP-209ENST00000522243 MAGEA11P43364 429 aa22.11■■□□□ 1.13
SDCBP-209ENST00000522243 GAS6Q14393 721 aa22.11■■□□□ 1.13
SDCBP-209ENST00000522243 MAPRE1Q15691 268 aaKnown RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms