RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 DDIASQ8IXT1 998 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 LRRC71Q8N4P6 559 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 FAM163AQ96GL9 167 aaPredicted RBP14.41□□□□□ -0.1
SYNPO-205ENST00000522122 ZDHHC15Q96MV8 337 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 ANKRD27Q96NW4 1050 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 METTL5Q9NRN9 209 aaKnown RBP14.41□□□□□ -0.1
SYNPO-205ENST00000522122 SNX5Q9Y5X3 404 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 TIAM2Q8IVF5 1701 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 E5RI56 91 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 MAPTP10636 758 aaKnown RBP14.41□□□□□ -0.1
SYNPO-205ENST00000522122 CDC42EP1Q00587 391 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 IMPG1Q17R60 797 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 APLFQ8IW19 511 aaPredicted RBP14.41□□□□□ -0.1
SYNPO-205ENST00000522122 UBA3Q8TBC4 463 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 TMC2Q8TDI7 906 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 ACSF2Q96CM8 615 aaPredicted RBP14.41□□□□□ -0.1
SYNPO-205ENST00000522122 PPP1R36Q96LQ0 422 aa14.41□□□□□ -0.1
SYNPO-205ENST00000522122 PHRF1Q9P1Y6 1649 aaKnown RBP14.41□□□□□ -0.1
SYNPO-205ENST00000522122 ENO3P13929 434 aaPredicted RBP14.4□□□□□ -0.1
SYNPO-205ENST00000522122 GARTP22102 1010 aa14.4□□□□□ -0.1
SYNPO-205ENST00000522122 CASP5P51878 434 aa14.4□□□□□ -0.1
SYNPO-205ENST00000522122 OCA2Q04671 838 aa14.4□□□□□ -0.1
SYNPO-205ENST00000522122 TRADDQ15628 312 aa14.4□□□□□ -0.1
SYNPO-205ENST00000522122 BMT2Q1RMZ1 405 aa14.4□□□□□ -0.1
SYNPO-205ENST00000522122 DUPD1Q68J44 220 aa14.4□□□□□ -0.1
SYNPO-205ENST00000522122 TAS1R2Q8TE23 839 aa14.4□□□□□ -0.1
SYNPO-205ENST00000522122 SH3GL3Q99963 347 aa14.4□□□□□ -0.1
SYNPO-205ENST00000522122 PCYOX1Q9UHG3 505 aa14.4□□□□□ -0.1
SYNPO-205ENST00000522122 POLBP06746 335 aa14.4□□□□□ -0.1
SYNPO-205ENST00000522122 PDK1Q15118 436 aa14.4□□□□□ -0.1
SYNPO-205ENST00000522122 PCDHA3Q9Y5H8 950 aa14.4□□□□□ -0.1
SYNPO-205ENST00000522122 MYH15Q9Y2K3 1946 aa14.4□□□□□ -0.1
SYNPO-205ENST00000522122 PSMD3O43242 534 aa14.4□□□□□ -0.1
SYNPO-205ENST00000522122 SHBGP04278 402 aa14.4□□□□□ -0.1
SYNPO-205ENST00000522122 MROH9Q5TGP6 573 aa14.4□□□□□ -0.1
SYNPO-205ENST00000522122 PPHLN1Q8NEY8 458 aaKnown RBP14.4□□□□□ -0.1
SYNPO-205ENST00000522122 SPDYE1Q8NFV5 336 aaPredicted RBP14.4□□□□□ -0.1
SYNPO-205ENST00000522122 SHISA4Q96DD7 197 aa14.4□□□□□ -0.1
SYNPO-205ENST00000522122 SYCE1LA8MT33 242 aa14.4□□□□□ -0.1
SYNPO-205ENST00000522122 NFKBIAP25963 317 aa14.4□□□□□ -0.1
SYNPO-205ENST00000522122 ANGPTL8Q6UXH0 198 aa14.4□□□□□ -0.1
SYNPO-205ENST00000522122 ASAP3Q8TDY4 903 aa14.4□□□□□ -0.1
SYNPO-205ENST00000522122 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.4□□□□□ -0.1
SYNPO-205ENST00000522122 TARSP26639 723 aaKnown RBP14.39□□□□□ -0.11
SYNPO-205ENST00000522122 DRG2P55039 364 aaKnown RBP14.39□□□□□ -0.11
SYNPO-205ENST00000522122 TRIP10Q15642 601 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 CHI3L2Q15782 390 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 ZBTB41Q5SVQ8 909 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 ARHGEF19Q8IW93 802 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 AFG1LQ8WV93 481 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 FAM111AQ96PZ2 611 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 GAKO14976 1311 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 FAM86B1E9PN63 330 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 M0R2N6 131 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 ZBTB7AO95365 584 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 FAM86B2P0C5J1 330 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 KCNA3P22001 575 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 ACADSBP45954 432 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 MRPS35P82673 323 aaKnown RBP14.39□□□□□ -0.11
SYNPO-205ENST00000522122 CLEC16AQ2KHT3 1053 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 NLRP9Q7RTR0 991 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 KDELC2Q7Z4H8 507 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 KIRREL3Q8IZU9 778 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 PARD3BQ8TEW8 1205 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 HPDLQ96IR7 371 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 TASP1Q9H6P5 420 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 LOC100653049A0A140TA62 436 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 OGTO15294 1046 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 KRT34O76011 436 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 PROSCO94903 275 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 RARBP10826 455 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 GFAPP14136 432 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 OVGP1Q12889 678 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 ZNF235Q14590 738 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 CCNG2Q16589 344 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 ASTE1Q2TB18 679 aaPredicted RBP14.39□□□□□ -0.11
SYNPO-205ENST00000522122 ZCWPW2Q504Y3 356 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 TFDP3Q5H9I0 405 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 POTEAQ6S8J7 498 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 PTPRN2Q92932 1015 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 PRMT6Q96LA8 375 aaPredicted RBP14.39□□□□□ -0.11
SYNPO-205ENST00000522122 VPS33BQ9H267 617 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 SLC8A2Q9UPR5 921 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 CCDC78A2IDD5 438 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 HBP1O60381 514 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 CPA2P48052 419 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 CAPRIN1Q14444 709 aaKnown RBP14.39□□□□□ -0.11
SYNPO-205ENST00000522122 NBPF20Q3BBV1 942 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 EFCAB12Q6NXP0 572 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 TMEM154Q6P9G4 183 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 SLC47A2Q86VL8 602 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 MRPL1Q9BYD6 325 aaKnown RBP14.39□□□□□ -0.11
SYNPO-205ENST00000522122 FRMD8P1Q9BZ68 369 aaPredicted RBP14.39□□□□□ -0.11
SYNPO-205ENST00000522122 FAM8A1Q9UBU6 413 aa14.39□□□□□ -0.11
SYNPO-205ENST00000522122 EEF2KO00418 725 aaKnown RBP14.38□□□□□ -0.11
SYNPO-205ENST00000522122 AIM2O14862 343 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 ARHGEF6Q15052 776 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 CYTH1Q15438 398 aa14.38□□□□□ -0.11
SYNPO-205ENST00000522122 LACTB2Q53H82 288 aaPredicted RBP14.38□□□□□ -0.11
SYNPO-205ENST00000522122 SV2AQ7L0J3 742 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms