RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 OSTM1Q86WC4 334 aa22.37■■□□□ 1.17
PABPC1-218ENST00000521865 TOP6BLQ8N6T0 577 aa22.37■■□□□ 1.17
PABPC1-218ENST00000521865 GDAP2Q9NXN4 497 aa22.37■■□□□ 1.17
PABPC1-218ENST00000521865 SLC8A2Q9UPR5 921 aa22.37■■□□□ 1.17
PABPC1-218ENST00000521865 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.36■■□□□ 1.17
PABPC1-218ENST00000521865 SOBPA7XYQ1 873 aa22.36■■□□□ 1.17
PABPC1-218ENST00000521865 ATG13O75143 517 aa22.36■■□□□ 1.17
PABPC1-218ENST00000521865 TNNC2P02585 160 aa22.36■■□□□ 1.17
PABPC1-218ENST00000521865 CKMP06732 381 aa22.36■■□□□ 1.17
PABPC1-218ENST00000521865 ARSAP15289 507 aa22.36■■□□□ 1.17
PABPC1-218ENST00000521865 HOXC13P31276 330 aa22.36■■□□□ 1.17
PABPC1-218ENST00000521865 PXNP49023 591 aaPredicted RBP22.36■■□□□ 1.17
PABPC1-218ENST00000521865 PDGFRLQ15198 375 aa22.36■■□□□ 1.17
PABPC1-218ENST00000521865 STK38Q15208 465 aa22.36■■□□□ 1.17
PABPC1-218ENST00000521865 TMEM196Q5HYL7 178 aa22.36■■□□□ 1.17
PABPC1-218ENST00000521865 WDR5BQ86VZ2 330 aa22.36■■□□□ 1.17
PABPC1-218ENST00000521865 ZNF233A6NK53 670 aa22.35■■□□□ 1.17
PABPC1-218ENST00000521865 KIAA0391O15091 583 aaKnown RBP22.35■■□□□ 1.17
PABPC1-218ENST00000521865 HCRTO43612 131 aa22.35■■□□□ 1.17
PABPC1-218ENST00000521865 NOL4O94818 638 aa22.35■■□□□ 1.17
PABPC1-218ENST00000521865 CCDC142Q17RM4 750 aa22.35■■□□□ 1.17
PABPC1-218ENST00000521865 FSTL4Q6MZW2 842 aa22.35■■□□□ 1.17
PABPC1-218ENST00000521865 PKN3Q6P5Z2 889 aa22.35■■□□□ 1.17
PABPC1-218ENST00000521865 FSIP1Q8NA03 581 aa22.35■■□□□ 1.17
PABPC1-218ENST00000521865 CXorf38Q8TB03 319 aa22.35■■□□□ 1.17
PABPC1-218ENST00000521865 SPATA18Q8TC71 538 aa22.35■■□□□ 1.17
PABPC1-218ENST00000521865 NETO1Q8TDF5 533 aa22.35■■□□□ 1.17
PABPC1-218ENST00000521865 EXOC4Q96A65 974 aa22.35■■□□□ 1.17
PABPC1-218ENST00000521865 TRMT2BQ96GJ1 504 aaKnown RBP22.35■■□□□ 1.17
PABPC1-218ENST00000521865 HPDLQ96IR7 371 aa22.35■■□□□ 1.17
PABPC1-218ENST00000521865 LRRC27Q9C0I9 530 aa22.35■■□□□ 1.17
PABPC1-218ENST00000521865 ZSCAN16Q9H4T2 348 aaPredicted RBP22.35■■□□□ 1.17
PABPC1-218ENST00000521865 SIX4Q9UIU6 781 aa22.35■■□□□ 1.17
PABPC1-218ENST00000521865 MTMR6Q9Y217 621 aa22.35■■□□□ 1.17
PABPC1-218ENST00000521865 NUP210Q8TEM1 1887 aaPredicted RBP22.34■■□□□ 1.17
PABPC1-218ENST00000521865 TRAV19A0A0A6YYK7 116 aa22.34■■□□□ 1.17
PABPC1-218ENST00000521865 OTOL1A6NHN0 477 aaPredicted RBP22.34■■□□□ 1.17
PABPC1-218ENST00000521865 TRDMT1O14717 391 aaKnown RBP22.34■■□□□ 1.17
PABPC1-218ENST00000521865 USP17L7P0C7H9 530 aa22.34■■□□□ 1.17
PABPC1-218ENST00000521865 CCDC192P0DO97 292 aa22.34■■□□□ 1.17
PABPC1-218ENST00000521865 HOXA6P31267 233 aa22.34■■□□□ 1.17
PABPC1-218ENST00000521865 IFNAR2P48551 515 aa22.34■■□□□ 1.17
PABPC1-218ENST00000521865 FAM160A1Q05DH4 1040 aa22.34■■□□□ 1.17
PABPC1-218ENST00000521865 ZNF268Q14587 947 aaPredicted RBP22.34■■□□□ 1.17
PABPC1-218ENST00000521865 MTF1Q14872 753 aa22.34■■□□□ 1.17
PABPC1-218ENST00000521865 SURF1Q15526 300 aa22.34■■□□□ 1.17
PABPC1-218ENST00000521865 CSRP2Q16527 193 aa22.34■■□□□ 1.17
PABPC1-218ENST00000521865 SOWAHAQ2M3V2 549 aa22.34■■□□□ 1.17
PABPC1-218ENST00000521865 CFAP221Q4G0U5 840 aa22.34■■□□□ 1.17
PABPC1-218ENST00000521865 C4orf50Q6ZRC1 276 aa22.34■■□□□ 1.17
PABPC1-218ENST00000521865 PRR23CQ6ZRP0 262 aa22.34■■□□□ 1.17
PABPC1-218ENST00000521865 CBWD2Q8IUF1 395 aa22.34■■□□□ 1.17
PABPC1-218ENST00000521865 CPA6Q8N4T0 437 aa22.34■■□□□ 1.17
PABPC1-218ENST00000521865 FAM160A2Q8N612 972 aaPredicted RBP22.34■■□□□ 1.17
PABPC1-218ENST00000521865 RIN3Q8TB24 985 aa22.34■■□□□ 1.17
PABPC1-218ENST00000521865 HPS3Q969F9 1004 aa22.34■■□□□ 1.17
PABPC1-218ENST00000521865 FUBP3Q96I24 572 aaKnown RBP eCLIP22.34■■□□□ 1.17
PABPC1-218ENST00000521865 PKMYT1Q99640 499 aa22.34■■□□□ 1.17
PABPC1-218ENST00000521865 SYT15Q9BQS2 421 aa22.34■■□□□ 1.17
PABPC1-218ENST00000521865 INTS13Q9NVM9 706 aa22.34■■□□□ 1.17
PABPC1-218ENST00000521865 ANK1P16157 1881 aa22.34■■□□□ 1.17
PABPC1-218ENST00000521865 RNF40O75150 1001 aa22.33■■□□□ 1.17
PABPC1-218ENST00000521865 TADA3O75528 432 aa22.33■■□□□ 1.17
PABPC1-218ENST00000521865 EGFP01133 1207 aa22.33■■□□□ 1.17
PABPC1-218ENST00000521865 PSMC1P62191 440 aaKnown RBP22.33■■□□□ 1.17
PABPC1-218ENST00000521865 DUOXA2Q1HG44 320 aa22.33■■□□□ 1.17
PABPC1-218ENST00000521865 GLIS3Q8NEA6 775 aa22.33■■□□□ 1.17
PABPC1-218ENST00000521865 OR5B17Q8NGF7 314 aa22.33■■□□□ 1.17
PABPC1-218ENST00000521865 INTS4Q96HW7 963 aaKnown RBP22.33■■□□□ 1.17
PABPC1-218ENST00000521865 MYRFLQ96LU7 910 aa22.33■■□□□ 1.17
PABPC1-218ENST00000521865 CYP2S1Q96SQ9 504 aa22.33■■□□□ 1.17
PABPC1-218ENST00000521865 MMS19Q96T76 1030 aa22.33■■□□□ 1.17
PABPC1-218ENST00000521865 P2RY13Q9BPV8 354 aa22.33■■□□□ 1.17
PABPC1-218ENST00000521865 TNMDQ9H2S6 317 aa22.33■■□□□ 1.17
PABPC1-218ENST00000521865 DUS2Q9NX74 493 aaKnown RBP22.33■■□□□ 1.17
PABPC1-218ENST00000521865 MAGEC2Q9UBF1 373 aaPredicted RBP22.33■■□□□ 1.17
PABPC1-218ENST00000521865 MORC2Q9Y6X9 1032 aaPredicted RBP22.33■■□□□ 1.17
PABPC1-218ENST00000521865 NCOR2Q9Y618 2525 aa22.32■■□□□ 1.16
PABPC1-218ENST00000521865 GABRDO14764 452 aa22.32■■□□□ 1.16
PABPC1-218ENST00000521865 STX6O43752 255 aa22.32■■□□□ 1.16
PABPC1-218ENST00000521865 DRD1P21728 446 aa22.32■■□□□ 1.16
PABPC1-218ENST00000521865 GALK1P51570 392 aa22.32■■□□□ 1.16
PABPC1-218ENST00000521865 KCNB1Q14721 858 aa22.32■■□□□ 1.16
PABPC1-218ENST00000521865 DPH6Q7L8W6 267 aa22.32■■□□□ 1.16
PABPC1-218ENST00000521865 ARL14EPQ8N8R7 260 aaPredicted RBP22.32■■□□□ 1.16
PABPC1-218ENST00000521865 CHFRQ96EP1 664 aa22.32■■□□□ 1.16
PABPC1-218ENST00000521865 HSPBP1Q9NZL4 362 aa22.32■■□□□ 1.16
PABPC1-218ENST00000521865 CDH9Q9ULB4 789 aa22.32■■□□□ 1.16
PABPC1-218ENST00000521865 WNT6Q9Y6F9 365 aa22.32■■□□□ 1.16
PABPC1-218ENST00000521865 PTPRJQ12913 1337 aa22.31■■□□□ 1.16
PABPC1-218ENST00000521865 SLC30A4O14863 429 aa22.31■■□□□ 1.16
PABPC1-218ENST00000521865 AXIN1O15169 862 aa22.31■■□□□ 1.16
PABPC1-218ENST00000521865 FOXD2O60548 495 aaPredicted RBP22.31■■□□□ 1.16
PABPC1-218ENST00000521865 ATP2C2O75185 946 aa22.31■■□□□ 1.16
PABPC1-218ENST00000521865 RPP40O75818 363 aaKnown RBP22.31■■□□□ 1.16
PABPC1-218ENST00000521865 PDGFRBP09619 1106 aa22.31■■□□□ 1.16
PABPC1-218ENST00000521865 GJA4P35212 333 aa22.31■■□□□ 1.16
PABPC1-218ENST00000521865 GRIK1P39086 918 aa22.31■■□□□ 1.16
PABPC1-218ENST00000521865 NASPP49321 788 aaPredicted RBP22.31■■□□□ 1.16
PABPC1-218ENST00000521865 ASIC1P78348 528 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms