RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, human

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS28-208	ENST00000521605	ASAP2	O43150	1006 aa		11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	KIF5C	O60282	957 aa		11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	C8A	P07357	584 aa		11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	PON1	P27169	355 aa		11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	FMO5	P49326	533 aa		11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	CASP4	P49662	377 aa		11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	CCR3	P51677	355 aa		11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	MXD4	Q14582	209 aa	Predicted RBP	11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	ASTE1	Q2TB18	679 aa	Predicted RBP	11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	KLHDC7A	Q5VTJ3	777 aa		11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	HEATR6	Q6AI08	1181 aa	Known RBP	11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	SLFN12L	Q6IEE8	588 aa		11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	ZPBP2	Q6X784	338 aa		11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	FAM81B	Q96LP2	452 aa		11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	GPR62	Q9BZJ7	368 aa		11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	CHRD	Q9H2X0	955 aa		11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	LMAN1L	Q9HAT1	526 aa		11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	CHST7	Q9NS84	486 aa		11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	FAM207A	Q9NSI2	230 aa	Predicted RBP	11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	HCFC1R1	Q9NWW0	138 aa		11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	TRMT1	Q9NXH9	659 aa	Known RBP	11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	HSPBP1	Q9NZL4	362 aa		11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	COQ4	Q9Y3A0	265 aa		11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.64	□□□□□ -0.55
MRPS28-208	ENST00000521605	SETX	Q7Z333	2677 aa	Known RBP	11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	SHISA7	A6NL88	538 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	DYNC1I1	O14576	645 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	CLIC2	O15247	247 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	SLC16A4	O15374	487 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	PJA2	O43164	708 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	FOXD2	O60548	495 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	KCNK5	O95279	499 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	EFEMP2	O95967	443 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	LDHA	P00338	332 aa	Known RBP	11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	CCDC172	P0C7W6	258 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	UCHL3	P15374	230 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	SPINK2	P20155	84 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	MLH1	P40692	756 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	KLK7	P49862	253 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	SCNN1G	P51170	649 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	JAM2	P57087	298 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	TUBB4B	P68371	445 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	CLDN10	P78369	228 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	CDC42EP1	Q00587	391 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	POU5F1	Q01860	360 aa	Known RBP	11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	FOXC1	Q12948	553 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	GRM2	Q14416	872 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	USP41	Q3LFD5	358 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	SFMBT2	Q5VUG0	894 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	HGSNAT	Q68CP4	663 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	CDCA2	Q69YH5	1023 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	PSAPL1	Q6NUJ1	521 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	FUT10	Q6P4F1	479 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	CEP68	Q76N32	757 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	MRPL10	Q7Z7H8	261 aa	Known RBP	11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	ZNF410	Q86VK4	478 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	NPAS3	Q8IXF0	933 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	FAM160A2	Q8N612	972 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	UBE2Q2	Q8WVN8	375 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	MCRS1	Q96EZ8	462 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	CCDC42	Q96M95	316 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	ZFP42	Q96MM3	310 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	GAD1	Q99259	594 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	CHP1	Q99653	195 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	COLEC11	Q9BWP8	271 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	APOL6	Q9BWW8	343 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	LSM14B	Q9BX40	385 aa	Known RBP	11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	C2orf40	Q9H1Z8	148 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	GPRC5C	Q9NQ84	441 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	FBXW11	Q9UKB1	542 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	LHX6	Q9UPM6	363 aa		11.63	□□□□□ -0.55
MRPS28-208	ENST00000521605	CNOT1	A5YKK6	2376 aa	Known RBP	11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	ARL5C	A6NH57	179 aa		11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	LRRC53	A6NM62	1247 aa		11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	CCDC169	A6NNP5	214 aa		11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	TM4SF5	O14894	197 aa		11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	AXIN1	O15169	862 aa		11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	EPHB6	O15197	1021 aa		11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	CTIF	O43310	598 aa	Known RBP	11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	KRT86	O43790	486 aa		11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	XYLB	O75191	536 aa		11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	ITGA4	P13612	1032 aa		11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	GLRA2	P23416	452 aa		11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	ADSS	P30520	456 aa		11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	ARHGAP25	P42331	645 aa		11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	CXCL12	P48061	93 aa		11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	CYP2J2	P51589	502 aa		11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	VAMP7	P51809	220 aa		11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	VAV2	P52735	878 aa		11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	LIMK1	P53667	647 aa		11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	RING1	Q06587	406 aa		11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	MTF1	Q14872	753 aa		11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	SPA17	Q15506	151 aa		11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	PABPC1L	Q4VXU2	614 aa	Known RBP	11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	ARHGAP29	Q52LW3	1261 aa		11.62	□□□□□ -0.55
MRPS28-208	ENST00000521605	UBXN11	Q5T124	520 aa		11.62	□□□□□ -0.55

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