RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 SF3A2Q15428 464 aaKnown RBP15.99■□□□□ 0.15
PRKDC-204ENST00000521331 DDR2Q16832 855 aa15.99■□□□□ 0.15
PRKDC-204ENST00000521331 CFAP221Q4G0U5 840 aa15.99■□□□□ 0.15
PRKDC-204ENST00000521331 RRAGBQ5VZM2 374 aa15.99■□□□□ 0.15
PRKDC-204ENST00000521331 SV2BQ7L1I2 683 aa15.99■□□□□ 0.15
PRKDC-204ENST00000521331 KBTBD6Q86V97 674 aa15.99■□□□□ 0.15
PRKDC-204ENST00000521331 CSGALNACT2Q8N6G5 542 aa15.99■□□□□ 0.15
PRKDC-204ENST00000521331 RIN3Q8TB24 985 aa15.99■□□□□ 0.15
PRKDC-204ENST00000521331 OSCP1Q8WVF1 389 aa15.99■□□□□ 0.15
PRKDC-204ENST00000521331 ZC3H10Q96K80 434 aaKnown RBP15.99■□□□□ 0.15
PRKDC-204ENST00000521331 ECT2Q9H8V3 914 aa15.99■□□□□ 0.15
PRKDC-204ENST00000521331 UPF2Q9HAU5 1272 aaKnown RBP15.99■□□□□ 0.15
PRKDC-204ENST00000521331 GDAP2Q9NXN4 497 aa15.99■□□□□ 0.15
PRKDC-204ENST00000521331 RBAKQ9NYW8 714 aaPredicted RBP15.99■□□□□ 0.15
PRKDC-204ENST00000521331 TRAV19A0A0A6YYK7 116 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 MYMKA6NI61 221 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 TULP1O00294 542 aaPredicted RBP15.98■□□□□ 0.15
PRKDC-204ENST00000521331 TADA3O75528 432 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 KRT37O76014 449 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 GCNT3O95395 438 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 USP17L7P0C7H9 530 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 CYP2F1P24903 491 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 PCSK1P29120 753 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 GJA4P35212 333 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 GALK1P51570 392 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 RBP5P82980 135 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 KCNA1Q09470 495 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 ST3GAL2Q16842 350 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 PLA2G2CQ5R387 149 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 SDHAF4Q5VUM1 108 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 USP49Q70CQ1 688 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 SPATA2LQ8IUW3 424 aaPredicted RBP15.98■□□□□ 0.15
PRKDC-204ENST00000521331 SYCP3Q8IZU3 236 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 TOP6BLQ8N6T0 577 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 FSIP1Q8NA03 581 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 STKLD1Q8NE28 680 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 CCDC26Q8TAB7 109 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 ATP2A3Q93084 1043 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 ACDQ96AP0 544 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 DNAJC19Q96DA6 116 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 SAAL1Q96ER3 474 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 FUBP3Q96I24 572 aaKnown RBP eCLIP15.98■□□□□ 0.15
PRKDC-204ENST00000521331 PKMYT1Q99640 499 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 TRPC7Q9HCX4 862 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 OLFML3Q9NRN5 406 aa15.98■□□□□ 0.15
PRKDC-204ENST00000521331 DUS2Q9NX74 493 aaKnown RBP15.98■□□□□ 0.15
PRKDC-204ENST00000521331 SRPRBQ9Y5M8 271 aaKnown RBP15.98■□□□□ 0.15
PRKDC-204ENST00000521331 CKMP06732 381 aa15.97■□□□□ 0.15
PRKDC-204ENST00000521331 ACAT1P24752 427 aaKnown RBP15.97■□□□□ 0.15
PRKDC-204ENST00000521331 IFNAR2P48551 515 aa15.97■□□□□ 0.15
PRKDC-204ENST00000521331 WNT7BP56706 349 aa15.97■□□□□ 0.15
PRKDC-204ENST00000521331 USP4Q13107 963 aa15.97■□□□□ 0.15
PRKDC-204ENST00000521331 NR1H3Q13133 447 aa15.97■□□□□ 0.15
PRKDC-204ENST00000521331 ZNF77Q15935 545 aa15.97■□□□□ 0.15
PRKDC-204ENST00000521331 SYT13Q7L8C5 426 aa15.97■□□□□ 0.15
PRKDC-204ENST00000521331 ADGRF2Q8IZF7 708 aa15.97■□□□□ 0.15
PRKDC-204ENST00000521331 CXorf38Q8TB03 319 aa15.97■□□□□ 0.15
PRKDC-204ENST00000521331 CD101Q93033 1021 aa15.97■□□□□ 0.15
PRKDC-204ENST00000521331 HHIPQ96QV1 700 aa15.97■□□□□ 0.15
PRKDC-204ENST00000521331 FBRSL1Q9HCM7 1045 aaKnown RBP15.97■□□□□ 0.15
PRKDC-204ENST00000521331 VPS45Q9NRW7 570 aa15.97■□□□□ 0.15
PRKDC-204ENST00000521331 TBC1D7Q9P0N9 293 aa15.97■□□□□ 0.15
PRKDC-204ENST00000521331 GTF3C4Q9UKN8 822 aa15.97■□□□□ 0.15
PRKDC-204ENST00000521331 R3HCC1Q9Y3T6 440 aaKnown RBP15.97■□□□□ 0.15
PRKDC-204ENST00000521331 SNX9Q9Y5X1 595 aa15.97■□□□□ 0.15
PRKDC-204ENST00000521331 KIF26AQ9ULI4 1882 aaPredicted RBP15.97■□□□□ 0.15
PRKDC-204ENST00000521331 MAP1BP46821 2468 aaKnown RBP15.96■□□□□ 0.15
PRKDC-204ENST00000521331 GABRDO14764 452 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 TM4SF5O14894 197 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 RHOBTB1O94844 696 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 APBB3O95704 486 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 KRT19P08727 400 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 TMEM191BP0C7N4 346 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 PDCP20941 246 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 MPLP40238 635 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 MAGEA11P43364 429 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 PDE6CP51160 858 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 MYO1EQ12965 1108 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 ELF2Q15723 593 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 CCDC6Q16204 474 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 PLK5Q496M5 336 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 STPG1Q5TH74 334 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 C4orf50Q6ZRC1 276 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 CCDC73Q6ZRK6 1079 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 DPH6Q7L8W6 267 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 ZSWIM2Q8NEG5 633 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 RPLP0P6Q8NHW5 317 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 CHAMP1Q96JM3 812 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 EBF1Q9UH73 591 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 FBXO2Q9UK22 296 aaPredicted RBP15.96■□□□□ 0.15
PRKDC-204ENST00000521331 ANGPTL2Q9UKU9 493 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 CLIC4Q9Y696 253 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 SDK1Q7Z5N4 2213 aa15.96■□□□□ 0.15
PRKDC-204ENST00000521331 FRMD3A2A2Y4 597 aa15.95■□□□□ 0.14
PRKDC-204ENST00000521331 VPS37CA5D8V6 355 aaPredicted RBP15.95■□□□□ 0.14
PRKDC-204ENST00000521331 KIAA0391O15091 583 aaKnown RBP15.95■□□□□ 0.14
PRKDC-204ENST00000521331 IDEP14735 1019 aa15.95■□□□□ 0.14
PRKDC-204ENST00000521331 TCF3P15923 654 aa15.95■□□□□ 0.14
PRKDC-204ENST00000521331 DMC1Q14565 340 aa15.95■□□□□ 0.14
PRKDC-204ENST00000521331 KCNB1Q14721 858 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms