RNA–Protein interactions for RNA: ENST00000521214.5

SPIDR-213, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-213ENST00000521214 KATNBL1Q9H079 304 aa8.4□□□□□ -1.07
SPIDR-213ENST00000521214 NSRP1Q9H0G5 558 aaKnown RBP8.4□□□□□ -1.07
SPIDR-213ENST00000521214 CARD9Q9H257 536 aa8.4□□□□□ -1.07
SPIDR-213ENST00000521214 APOBEC3GQ9HC16 384 aaKnown RBP8.4□□□□□ -1.07
SPIDR-213ENST00000521214 FAM114A2Q9NRY5 505 aa8.4□□□□□ -1.07
SPIDR-213ENST00000521214 TUBGCP4Q9UGJ1 667 aa8.4□□□□□ -1.07
SPIDR-213ENST00000521214 HMGXB4Q9UGU5 601 aa8.4□□□□□ -1.07
SPIDR-213ENST00000521214 PASKQ96RG2 1323 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 HNRNPRO43390 633 aaKnown RBP8.39□□□□□ -1.07
SPIDR-213ENST00000521214 EXTL3O43909 919 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 INHAP05111 366 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 SERPING1P05155 500 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 NQO1P15559 274 aaKnown RBP8.39□□□□□ -1.07
SPIDR-213ENST00000521214 ALOX15P16050 662 aaPredicted RBP8.39□□□□□ -1.07
SPIDR-213ENST00000521214 GALCP54803 685 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 USP46P62068 366 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 KCNJ2P63252 427 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 MBTD1Q05BQ5 628 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 BMT2Q1RMZ1 405 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 HGSNATQ68CP4 663 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 NOP9Q86U38 636 aaKnown RBP8.39□□□□□ -1.07
SPIDR-213ENST00000521214 VPS36Q86VN1 386 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 CCDC33Q8N5R6 958 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 ELAC2Q9BQ52 826 aaKnown RBP8.39□□□□□ -1.07
SPIDR-213ENST00000521214 AP1M1Q9BXS5 423 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 NIFKQ9BYG3 293 aaKnown RBP8.39□□□□□ -1.07
SPIDR-213ENST00000521214 SENP6Q9GZR1 1112 aaPredicted RBP8.39□□□□□ -1.07
SPIDR-213ENST00000521214 ECT2Q9H8V3 914 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 EPB41L5Q9HCM4 733 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 PRDM5Q9NQX1 630 aaPredicted RBP8.39□□□□□ -1.07
SPIDR-213ENST00000521214 TJP2Q9UDY2 1190 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 NOVA2Q9UNW9 492 aaKnown RBP8.39□□□□□ -1.07
SPIDR-213ENST00000521214 A8MUI8 341 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 F8W810 466 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 DDX3XO00571 662 aaKnown RBP eCLIP8.39□□□□□ -1.07
SPIDR-213ENST00000521214 KCNK3O14649 394 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 CTNNA1P35221 906 aaKnown RBP8.39□□□□□ -1.07
SPIDR-213ENST00000521214 APLP1P51693 650 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 YARSP54577 528 aaKnown RBP8.39□□□□□ -1.07
SPIDR-213ENST00000521214 ARPP19P56211 112 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 PTENP60484 403 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 MTM1Q13496 603 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 SAMD3Q8N6K7 520 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 HIC2Q96JB3 615 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 RMDN2Q96LZ7 410 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 SMYD3Q9H7B4 428 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 PDLIM7Q9NR12 457 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 ITIH6Q6UXX5 1313 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 SCN4AP35499 1836 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 WDR90Q96KV7 1748 aa8.39□□□□□ -1.07
SPIDR-213ENST00000521214 M0QZ92 97 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 TACC1O75410 805 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 TNNC2P02585 160 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 CPT1AP50416 773 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 TUBP50607 506 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 PSMC1P62191 440 aaKnown RBP8.38□□□□□ -1.07
SPIDR-213ENST00000521214 MAP7Q14244 749 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 CDO1Q16878 200 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 KRT71Q3SY84 523 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 SLC44A4Q53GD3 710 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 PLPPR4Q7Z2D5 763 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 CTU1Q7Z7A3 348 aaKnown RBP8.38□□□□□ -1.07
SPIDR-213ENST00000521214 ZC3H18Q86VM9 953 aaKnown RBP8.38□□□□□ -1.07
SPIDR-213ENST00000521214 ATP11CQ8NB49 1132 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 LNX1Q8TBB1 728 aaPredicted RBP8.38□□□□□ -1.07
SPIDR-213ENST00000521214 ZNF653Q96CK0 615 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 SCLYQ96I15 445 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 GAD1Q99259 594 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 DDX23Q9BUQ8 820 aaKnown RBP8.38□□□□□ -1.07
SPIDR-213ENST00000521214 DMAC2Q9NW81 257 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 NOC2LQ9Y3T9 749 aaKnown RBP8.38□□□□□ -1.07
SPIDR-213ENST00000521214 CDY2AQ9Y6F7 541 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 IGKV6D-21A0A0A0MT36 114 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 A0A0B4J269 797 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 OGTO15294 1046 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 RECQL4O94761 1208 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 HEXIM1O94992 359 aaKnown RBP8.38□□□□□ -1.07
SPIDR-213ENST00000521214 MAP3K6O95382 1288 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 GSTT1P30711 240 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 PDE6CP51160 858 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 AMPD2Q01433 879 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 ZNF618Q5T7W0 954 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 MPZL3Q6UWV2 235 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 IRF2BP2Q7Z5L9 587 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 APLFQ8IW19 511 aaPredicted RBP8.38□□□□□ -1.07
SPIDR-213ENST00000521214 OR6B3Q8NGW1 331 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 LRRN4Q8WUT4 740 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 RAPGEF5Q92565 580 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 HAUS1Q96CS2 278 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 ZMAT2Q96NC0 199 aaKnown RBP8.38□□□□□ -1.07
SPIDR-213ENST00000521214 ACAP3Q96P50 834 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 GCOM2Q9BZD3 368 aaPredicted RBP8.38□□□□□ -1.07
SPIDR-213ENST00000521214 PRG3Q9Y2Y8 225 aaPredicted RBP8.38□□□□□ -1.07
SPIDR-213ENST00000521214 LCTP09848 1927 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 CCDC160A6NGH7 325 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 NT5C1B-RDH14C9J2C7 533 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 ACKR2O00590 384 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 SLC16A3O15427 465 aaKnown RBP8.38□□□□□ -1.07
SPIDR-213ENST00000521214 VNN1O95497 513 aa8.38□□□□□ -1.07
SPIDR-213ENST00000521214 FUT4P22083 530 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms