RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 GCC2Q8IWJ2 1684 aa5.36□□□□□ -1.55
CLK4-207ENST00000520909 TRIM75PA6NK02 468 aa5.36□□□□□ -1.55
CLK4-207ENST00000520909 PRRT4C9JH25 899 aa5.36□□□□□ -1.55
CLK4-207ENST00000520909 K7ESF4 209 aa5.36□□□□□ -1.55
CLK4-207ENST00000520909 RPLP2P05387 115 aaKnown RBP5.36□□□□□ -1.55
CLK4-207ENST00000520909 JUPP14923 745 aa5.36□□□□□ -1.55
CLK4-207ENST00000520909 ITGALP20701 1170 aa5.36□□□□□ -1.55
CLK4-207ENST00000520909 MASP1P48740 699 aa5.36□□□□□ -1.55
CLK4-207ENST00000520909 PLCD1P51178 756 aa5.36□□□□□ -1.55
CLK4-207ENST00000520909 POLGP54098 1239 aaPredicted RBP5.36□□□□□ -1.55
CLK4-207ENST00000520909 AARS2Q5JTZ9 985 aaKnown RBP5.36□□□□□ -1.55
CLK4-207ENST00000520909 RBM20Q5T481 1227 aaKnown RBP5.36□□□□□ -1.55
CLK4-207ENST00000520909 TEDDM1Q5T9Z0 273 aa5.36□□□□□ -1.55
CLK4-207ENST00000520909 SLC2A7Q6PXP3 512 aa5.36□□□□□ -1.55
CLK4-207ENST00000520909 TECPR1Q7Z6L1 1165 aa5.36□□□□□ -1.55
CLK4-207ENST00000520909 COG1Q8WTW3 980 aa5.36□□□□□ -1.55
CLK4-207ENST00000520909 FAM136AQ96C01 138 aa5.36□□□□□ -1.55
CLK4-207ENST00000520909 HMCESQ96FZ2 354 aa5.36□□□□□ -1.55
CLK4-207ENST00000520909 SMOC2Q9H3U7 446 aa5.36□□□□□ -1.55
CLK4-207ENST00000520909 TUBA8Q9NY65 449 aaPredicted RBP5.36□□□□□ -1.55
CLK4-207ENST00000520909 ATP7AQ04656 1500 aa5.36□□□□□ -1.55
CLK4-207ENST00000520909 ZFYVE16Q7Z3T8 1539 aa5.36□□□□□ -1.55
CLK4-207ENST00000520909 MLH3Q9UHC1 1453 aa5.36□□□□□ -1.55
CLK4-207ENST00000520909 QSOX1O00391 747 aa5.35□□□□□ -1.55
CLK4-207ENST00000520909 TOP3BO95985 862 aaKnown RBP5.35□□□□□ -1.55
CLK4-207ENST00000520909 NHLRC4P0CG21 123 aaPredicted RBP5.35□□□□□ -1.55
CLK4-207ENST00000520909 TKTP29401 623 aaKnown RBP5.35□□□□□ -1.55
CLK4-207ENST00000520909 CD6P30203 668 aa5.35□□□□□ -1.55
CLK4-207ENST00000520909 CYP2C19P33261 490 aa5.35□□□□□ -1.55
CLK4-207ENST00000520909 IL10RAQ13651 578 aa5.35□□□□□ -1.55
CLK4-207ENST00000520909 LAMB3Q13751 1172 aa5.35□□□□□ -1.55
CLK4-207ENST00000520909 CCDC93Q567U6 631 aa5.35□□□□□ -1.55
CLK4-207ENST00000520909 TAF2Q6P1X5 1199 aa5.35□□□□□ -1.55
CLK4-207ENST00000520909 ZNF804AQ7Z570 1209 aa5.35□□□□□ -1.55
CLK4-207ENST00000520909 NOP9Q86U38 636 aaKnown RBP5.35□□□□□ -1.55
CLK4-207ENST00000520909 PSD4Q8NDX1 1056 aa5.35□□□□□ -1.55
CLK4-207ENST00000520909 GNL3LQ9NVN8 582 aaKnown RBP5.35□□□□□ -1.55
CLK4-207ENST00000520909 SIDT1Q9NXL6 827 aaKnown RBP5.35□□□□□ -1.55
CLK4-207ENST00000520909 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.35□□□□□ -1.55
CLK4-207ENST00000520909 ERBINQ96RT1 1412 aa5.35□□□□□ -1.55
CLK4-207ENST00000520909 KIF13AQ9H1H9 1805 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 PLXNC1O60486 1568 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 DNAJB5O75953 348 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 ONECUT2O95948 504 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 CHEK2O96017 543 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 GNAI3P08754 354 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 SNHG28P0DPA3 235 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 CCKBRP32239 447 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 NR4A2P43354 598 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 PSMC1P62191 440 aaKnown RBP5.34□□□□□ -1.55
CLK4-207ENST00000520909 GNAI1P63096 354 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 HABP2Q14520 560 aaPredicted RBP5.34□□□□□ -1.55
CLK4-207ENST00000520909 ZNF618Q5T7W0 954 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 PXDC1Q5TGL8 231 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 GGT6Q6P531 493 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 PGM2L1Q6PCE3 622 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 KLHDC4Q8TBB5 520 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 TMEM79Q9BSE2 394 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 CNPPD1Q9BV87 410 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 PRSS22Q9GZN4 317 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 SPRTNQ9H040 489 aaPredicted RBP5.34□□□□□ -1.55
CLK4-207ENST00000520909 VPS16Q9H269 839 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 ETAA1Q9NY74 926 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 CFAP97Q9P2B7 532 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 TUBD1Q9UJT1 453 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 TBX22Q9Y458 520 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 IPPQ9Y573 584 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 A2MP01023 1474 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 PZPP20742 1482 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 PPRC1Q5VV67 1664 aaKnown RBP5.34□□□□□ -1.55
CLK4-207ENST00000520909 YEATS2Q9ULM3 1422 aa5.34□□□□□ -1.55
CLK4-207ENST00000520909 KDM5CP41229 1560 aa5.34□□□□□ -1.56
CLK4-207ENST00000520909 INO80Q9ULG1 1556 aaPredicted RBP5.34□□□□□ -1.56
CLK4-207ENST00000520909 KANK1Q14678 1352 aa5.34□□□□□ -1.56
CLK4-207ENST00000520909 FNDC1Q4ZHG4 1894 aaPredicted RBP5.33□□□□□ -1.56
CLK4-207ENST00000520909 KCNU1A8MYU2 1149 aa5.33□□□□□ -1.56
CLK4-207ENST00000520909 MYO1FO00160 1098 aa5.33□□□□□ -1.56
CLK4-207ENST00000520909 ZNF213O14771 459 aa5.33□□□□□ -1.56
CLK4-207ENST00000520909 INSIG1O15503 277 aa5.33□□□□□ -1.56
CLK4-207ENST00000520909 HTRA2O43464 458 aaPredicted RBP5.33□□□□□ -1.56
CLK4-207ENST00000520909 GJB1P08034 283 aa5.33□□□□□ -1.56
CLK4-207ENST00000520909 PCSK6P29122 969 aa5.33□□□□□ -1.56
CLK4-207ENST00000520909 CNGA1P29973 690 aa5.33□□□□□ -1.56
CLK4-207ENST00000520909 EEFSECP57772 596 aaKnown RBP5.33□□□□□ -1.56
CLK4-207ENST00000520909 ACAP2Q15057 778 aa5.33□□□□□ -1.56
CLK4-207ENST00000520909 WDR53Q7Z5U6 358 aaPredicted RBP5.33□□□□□ -1.56
CLK4-207ENST00000520909 JADE3Q92613 823 aa5.33□□□□□ -1.56
CLK4-207ENST00000520909 DMRTA2Q96SC8 542 aa5.33□□□□□ -1.56
CLK4-207ENST00000520909 NELL2Q99435 816 aa5.33□□□□□ -1.56
CLK4-207ENST00000520909 SIK2Q9H0K1 926 aa5.33□□□□□ -1.56
CLK4-207ENST00000520909 RLIMQ9NVW2 624 aa5.33□□□□□ -1.56
CLK4-207ENST00000520909 MKS1Q9NXB0 559 aa5.33□□□□□ -1.56
CLK4-207ENST00000520909 LIMCH1Q9UPQ0 1083 aa5.33□□□□□ -1.56
CLK4-207ENST00000520909 RAD54BQ9Y620 910 aa5.33□□□□□ -1.56
CLK4-207ENST00000520909 HECW2Q9P2P5 1572 aa5.33□□□□□ -1.56
CLK4-207ENST00000520909 ANKRD30BQ9BXX2 1392 aa5.33□□□□□ -1.56
CLK4-207ENST00000520909 CACNA1IQ9P0X4 2223 aa5.33□□□□□ -1.56
CLK4-207ENST00000520909 ATP10AO60312 1499 aa5.32□□□□□ -1.56
CLK4-207ENST00000520909 MAGI2Q86UL8 1455 aa5.32□□□□□ -1.56
CLK4-207ENST00000520909 KIDINS220Q9ULH0 1771 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms