RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 MYCP01106 439 aaPredicted RBP11.95□□□□□ -0.5
CLK4-206ENST00000520878 EIF3EP60228 445 aaKnown RBP11.95□□□□□ -0.5
CLK4-206ENST00000520878 CCNG2Q16589 344 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 TFDP3Q5H9I0 405 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 TAPT1Q6NXT6 567 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 NOTUMQ6P988 496 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 FAM71DQ8N9W8 422 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 SHCBP1Q8NEM2 672 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 GTF3C2Q8WUA4 911 aaPredicted RBP11.95□□□□□ -0.5
CLK4-206ENST00000520878 RXFP2Q8WXD0 754 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 CD101Q93033 1021 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 EIF2AQ9BY44 585 aaKnown RBP11.95□□□□□ -0.5
CLK4-206ENST00000520878 NXF3Q9H4D5 531 aaKnown RBP11.95□□□□□ -0.5
CLK4-206ENST00000520878 ASB7Q9H672 318 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 LRRC19Q9H756 370 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 GOLGA2P5Q9HBQ8 144 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 GRHL1Q9NZI5 618 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 CTNNAL1Q9UBT7 734 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 CAPN9O14815 690 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 RIPK2O43353 540 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 LSM8O95777 96 aaKnown RBP11.94□□□□□ -0.5
CLK4-206ENST00000520878 RBP3P10745 1247 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 ASPAP45381 313 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 DUSP28Q4G0W2 176 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 ZDHHC24Q6UX98 284 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 MAP7D3Q8IWC1 876 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 C3orf20Q8ND61 904 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 NPLOC4Q8TAT6 608 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 SPATA18Q8TC71 538 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 DNAI2Q9GZS0 605 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 DHX35Q9H5Z1 703 aaKnown RBP11.94□□□□□ -0.5
CLK4-206ENST00000520878 HUS1O60921 280 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 PPFIA2O75334 1257 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 RECQL4O94761 1208 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 MMP3P08254 477 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 RAD23BP54727 409 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 YWHAGP61981 247 aaKnown RBP eCLIP11.94□□□□□ -0.5
CLK4-206ENST00000520878 OGDHQ02218 1023 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 UBAP2Q5T6F2 1119 aaKnown RBP11.94□□□□□ -0.5
CLK4-206ENST00000520878 GKAP1Q5VSY0 366 aaPredicted RBP11.94□□□□□ -0.5
CLK4-206ENST00000520878 PPP1R21Q6ZMI0 780 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 CACNA2D3Q8IZS8 1091 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 P3H4Q92791 437 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 ZNF518BQ9C0D4 1074 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 EPN3Q9H201 632 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 CDHR5Q9HBB8 845 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 DDX56Q9NY93 547 aaKnown RBP11.94□□□□□ -0.5
CLK4-206ENST00000520878 SEPT10Q9P0V9 454 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 SIX4Q9UIU6 781 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 BARX2Q9UMQ3 279 aaPredicted RBP11.94□□□□□ -0.5
CLK4-206ENST00000520878 INPP5FQ9Y2H2 1132 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 PPME1Q9Y570 386 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 A6NJR5 290 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 SPAG7O75391 227 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 VDRP11473 427 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 BRAFP15056 766 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 POU5F1Q01860 360 aaKnown RBP11.94□□□□□ -0.5
CLK4-206ENST00000520878 TAP1Q03518 808 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 TAF5Q15542 800 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 CCL14Q16627 93 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 PTGISQ16647 500 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 FAXCQ5TGI0 409 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 CDCA2Q69YH5 1023 aaPredicted RBP11.94□□□□□ -0.5
CLK4-206ENST00000520878 PYROXD1Q8WU10 500 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 PRMT1Q99873 361 aaKnown RBP11.94□□□□□ -0.5
CLK4-206ENST00000520878 ELAC2Q9BQ52 826 aaKnown RBP11.94□□□□□ -0.5
CLK4-206ENST00000520878 SDCBP2Q9H190 292 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 RASSF4Q9H2L5 321 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 LRRC4CQ9HCJ2 640 aa11.94□□□□□ -0.5
CLK4-206ENST00000520878 TSPAN1O60635 241 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 ERBB2P04626 1255 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 SMIM10L2AP0DMW4 78 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 SMIM10L2BP0DMW5 78 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 ACAT1P24752 427 aaKnown RBP11.93□□□□□ -0.5
CLK4-206ENST00000520878 ATP5DP30049 168 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 MIPP30301 263 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 MAGEA4P43358 317 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 MMRN1Q13201 1228 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 ZNF792Q3KQV3 632 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 PAN2Q504Q3 1202 aaKnown RBP11.93□□□□□ -0.5
CLK4-206ENST00000520878 LDLRAD1Q5T700 205 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 ILDR2Q71H61 639 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 CROCCP2Q86T23 111 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 KATNAL2Q8IYT4 538 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 ZNF473Q8WTR7 871 aaKnown RBP11.93□□□□□ -0.5
CLK4-206ENST00000520878 SLITRK1Q96PX8 696 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 SPC25Q9HBM1 224 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 ZDHHC18Q9NUE0 388 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 TUBGCP4Q9UGJ1 667 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 GGT7Q9UJ14 662 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 USP18Q9UMW8 372 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 TIMM13Q9Y5L4 95 aaPredicted RBP11.93□□□□□ -0.5
CLK4-206ENST00000520878 PHIPQ8WWQ0 1821 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 RRN3P2A6NIE6 340 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 RASA4BC9J798 803 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 PPEF2O14830 753 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 RASA4O43374 803 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 CD48P09326 243 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 SH3PXD2AQ5TCZ1 1133 aa11.93□□□□□ -0.5
CLK4-206ENST00000520878 CASC4Q6P4E1 433 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms