RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 SLC9A2Q9UBY0 812 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 LNPEPQ9UIQ6 1025 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 RPL26L1Q9UNX3 145 aaKnown RBP13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 MCF2LO15068 1137 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 RNF8O76064 485 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 DEUP1Q05D60 604 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 TCEAL1Q15170 157 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 ZNF568Q3ZCX4 644 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 FAXCQ5TGI0 409 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 HHIPL2Q6UWX4 724 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 PCGF5Q86SE9 256 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 SIAH1Q8IUQ4 282 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 KCTD6Q8NC69 237 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 RBM15BQ8NDT2 890 aaKnown RBP13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 DDX1Q92499 740 aaKnown RBP13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 APOL6Q9BWW8 343 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 WWP1Q9H0M0 922 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 SEPT9Q9UHD8 586 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 MAP3K6O95382 1288 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 UNGP13051 313 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 ELK3P41970 407 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 INHBEP58166 350 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 HIC1Q14526 733 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 TRIP10Q15642 601 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 KBTBD12Q3ZCT8 623 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 TFDP3Q5H9I0 405 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 FNBP1LQ5T0N5 605 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 LGSNQ5TDP6 509 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 ATG16L1Q676U5 607 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 ZCCHC23Q6ZST2 131 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 TMPRSS6Q8IU80 811 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 ARHGAP18Q8N392 663 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 ZNF398Q8TD17 642 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 FAF2Q96CS3 445 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 HIC2Q96JB3 615 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 TUBGCP5Q96RT8 1024 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 PCDH9Q9HC56 1237 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 COL22A1Q8NFW1 1626 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 SHANK3Q9BYB0 1731 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 LOC100653049A0A140TA62 436 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 KRT34O76011 436 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 KRT37O76014 449 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 STK10O94804 968 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 WEE2P0C1S8 567 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 NCF2P19878 526 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 NRLP54845 237 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 GPX6P59796 221 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 GTF2BQ00403 316 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 KLF1Q13351 362 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 HADHQ16836 314 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 MMEL1Q495T6 779 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 TXNRD3NBQ6F5E7 133 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 CASC4Q6P4E1 433 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 TDRPQ86YL5 185 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 IL31RAQ8NI17 732 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 E2F7Q96AV8 911 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 NDNQ99608 321 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 PCMTD2Q9NV79 361 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 NDC80O14777 642 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 GTF2H1P32780 548 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 EIF3EP60228 445 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 GCNT1Q02742 428 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 BSPRYQ5W0U4 402 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 OR52E8Q6IFG1 317 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 ABRAQ8N0Z2 381 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 ABTB1Q969K4 478 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 ZNF395Q9H8N7 513 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 RABGEF1Q9UJ41 708 aa13.42□□□□□ -0.26
TRAPPC9-208ENST00000520857 MYPNQ86TC9 1320 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 RBP3P10745 1247 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 MTERF2Q49AM1 385 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 MSS51Q4VC12 460 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 RNASEH2BQ5TBB1 312 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 PIP4K2CQ8TBX8 421 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 SRPK1Q96SB4 655 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 PPCSQ9HAB8 311 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 IFT122Q9HBG6 1241 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 ZBTB12Q9Y330 459 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 KBTBD13C9JR72 458 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 TRAFD1O14545 582 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 FAM155BO75949 473 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 PDE5AO76074 875 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 UGCGQ16739 394 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 EFHC2Q5JST6 749 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 EFCAB3Q8N7B9 438 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 ECSITQ9BQ95 431 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 FAM198AQ9UFP1 575 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 NUMBLQ9Y6R0 609 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 F5H423 210 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 GRIN3BO60391 1043 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 RTP1P59025 263 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 NOMO3P69849 1222 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 SLC25A3Q00325 362 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 CUL2Q13617 745 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 TRMT5Q32P41 509 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 MTHFD1LQ6UB35 978 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 TRIM72Q6ZMU5 477 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 SDCCAG8Q86SQ7 713 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms