RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 KLHL30Q0D2K2 578 aa18.89■□□□□ 0.61
SDC2-205ENST00000520233 GRIN2CQ14957 1233 aa18.89■□□□□ 0.61
SDC2-205ENST00000520233 HGSNATQ68CP4 663 aa18.89■□□□□ 0.61
SDC2-205ENST00000520233 GPR153Q6NV75 609 aa18.89■□□□□ 0.61
SDC2-205ENST00000520233 WDR59Q6PJI9 974 aa18.89■□□□□ 0.61
SDC2-205ENST00000520233 LCLAT1Q6UWP7 414 aa18.89■□□□□ 0.61
SDC2-205ENST00000520233 PAQR9Q6ZVX9 377 aa18.89■□□□□ 0.61
SDC2-205ENST00000520233 SPATA2LQ8IUW3 424 aaPredicted RBP18.89■□□□□ 0.61
SDC2-205ENST00000520233 FUKQ8N0W3 1084 aa18.89■□□□□ 0.61
SDC2-205ENST00000520233 SPPL2BQ8TCT7 592 aa18.89■□□□□ 0.61
SDC2-205ENST00000520233 SLC2A14Q8TDB8 520 aa18.89■□□□□ 0.61
SDC2-205ENST00000520233 DDX1Q92499 740 aaKnown RBP18.89■□□□□ 0.61
SDC2-205ENST00000520233 FUBP3Q96I24 572 aaKnown RBP eCLIP18.89■□□□□ 0.61
SDC2-205ENST00000520233 PANX2Q96RD6 677 aa18.89■□□□□ 0.61
SDC2-205ENST00000520233 PRDM12Q9H4Q4 367 aa18.89■□□□□ 0.61
SDC2-205ENST00000520233 ABCB6Q9NP58 842 aa18.89■□□□□ 0.61
SDC2-205ENST00000520233 AFF4Q9UHB7 1163 aaKnown RBP18.89■□□□□ 0.61
SDC2-205ENST00000520233 MAFFQ9ULX9 164 aa18.89■□□□□ 0.61
SDC2-205ENST00000520233 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.89■□□□□ 0.61
SDC2-205ENST00000520233 PCDHB5Q9Y5E4 795 aa18.89■□□□□ 0.61
SDC2-205ENST00000520233 ATP8B3O60423 1300 aa18.89■□□□□ 0.61
SDC2-205ENST00000520233 SKILP12757 684 aa18.88■□□□□ 0.61
SDC2-205ENST00000520233 ATF2P15336 505 aa18.88■□□□□ 0.61
SDC2-205ENST00000520233 ADORA2BP29275 332 aa18.88■□□□□ 0.61
SDC2-205ENST00000520233 CDR2Q01850 454 aa18.88■□□□□ 0.61
SDC2-205ENST00000520233 MEA1Q16626 185 aa18.88■□□□□ 0.61
SDC2-205ENST00000520233 CFAP221Q4G0U5 840 aa18.88■□□□□ 0.61
SDC2-205ENST00000520233 HABP4Q5JVS0 413 aaKnown RBP18.88■□□□□ 0.61
SDC2-205ENST00000520233 FAM35AQ86V20 835 aa18.88■□□□□ 0.61
SDC2-205ENST00000520233 PALB2Q86YC2 1186 aa18.88■□□□□ 0.61
SDC2-205ENST00000520233 MED10Q9BTT4 135 aa18.88■□□□□ 0.61
SDC2-205ENST00000520233 HAUS4Q9H6D7 363 aa18.88■□□□□ 0.61
SDC2-205ENST00000520233 HSFX1Q9UBD0 423 aa18.88■□□□□ 0.61
SDC2-205ENST00000520233 TSPAN16Q9UKR8 245 aa18.88■□□□□ 0.61
SDC2-205ENST00000520233 PCDHGC3Q9UN70 934 aa18.88■□□□□ 0.61
SDC2-205ENST00000520233 CLDN5O00501 218 aa18.87■□□□□ 0.61
SDC2-205ENST00000520233 CLASP2O75122 1294 aaKnown RBP18.87■□□□□ 0.61
SDC2-205ENST00000520233 VNN2O95498 520 aa18.87■□□□□ 0.61
SDC2-205ENST00000520233 CDK17Q00537 523 aa18.87■□□□□ 0.61
SDC2-205ENST00000520233 ADCY1Q08828 1119 aa18.87■□□□□ 0.61
SDC2-205ENST00000520233 GOLGA7BQ2TAP0 167 aa18.87■□□□□ 0.61
SDC2-205ENST00000520233 LILRA6Q6PI73 481 aa18.87■□□□□ 0.61
SDC2-205ENST00000520233 CCDC186Q7Z3E2 898 aa18.87■□□□□ 0.61
SDC2-205ENST00000520233 ADGRD2Q7Z7M1 963 aa18.87■□□□□ 0.61
SDC2-205ENST00000520233 ANKRD52Q8NB46 1076 aa18.87■□□□□ 0.61
SDC2-205ENST00000520233 ATAD1Q8NBU5 361 aa18.87■□□□□ 0.61
SDC2-205ENST00000520233 SLC20A1Q8WUM9 679 aa18.87■□□□□ 0.61
SDC2-205ENST00000520233 PPP2R3CQ969Q6 453 aa18.87■□□□□ 0.61
SDC2-205ENST00000520233 PGLYRP2Q96PD5 576 aa18.87■□□□□ 0.61
SDC2-205ENST00000520233 AGPAT1Q99943 283 aa18.87■□□□□ 0.61
SDC2-205ENST00000520233 SYT11Q9BT88 431 aa18.87■□□□□ 0.61
SDC2-205ENST00000520233 ZNF518BQ9C0D4 1074 aa18.87■□□□□ 0.61
SDC2-205ENST00000520233 ABI2Q9NYB9 513 aaPredicted RBP18.87■□□□□ 0.61
SDC2-205ENST00000520233 HESX1Q9UBX0 185 aa18.87■□□□□ 0.61
SDC2-205ENST00000520233 TGM5O43548 720 aa18.86■□□□□ 0.61
SDC2-205ENST00000520233 MICAL2O94851 1124 aa18.86■□□□□ 0.61
SDC2-205ENST00000520233 MMEP08473 750 aa18.86■□□□□ 0.61
SDC2-205ENST00000520233 FAM200BP0CF97 657 aa18.86■□□□□ 0.61
SDC2-205ENST00000520233 CHRNB2P17787 502 aa18.86■□□□□ 0.61
SDC2-205ENST00000520233 POU3F3P20264 500 aaPredicted RBP18.86■□□□□ 0.61
SDC2-205ENST00000520233 BDNFP23560 247 aa18.86■□□□□ 0.61
SDC2-205ENST00000520233 MAGEA11P43364 429 aa18.86■□□□□ 0.61
SDC2-205ENST00000520233 CLCN4P51793 760 aa18.86■□□□□ 0.61
SDC2-205ENST00000520233 CCDC173Q0VFZ6 552 aa18.86■□□□□ 0.61
SDC2-205ENST00000520233 PKDCCQ504Y2 493 aa18.86■□□□□ 0.61
SDC2-205ENST00000520233 TDRD12Q587J7 1177 aaKnown RBP18.86■□□□□ 0.61
SDC2-205ENST00000520233 TAF3Q5VWG9 929 aa18.86■□□□□ 0.61
SDC2-205ENST00000520233 VSTM1Q6UX27 236 aa18.86■□□□□ 0.61
SDC2-205ENST00000520233 ZNF571Q7Z3V5 609 aaPredicted RBP18.86■□□□□ 0.61
SDC2-205ENST00000520233 SMARCD1Q96GM5 515 aa18.86■□□□□ 0.61
SDC2-205ENST00000520233 CDCA3Q99618 268 aaPredicted RBP18.86■□□□□ 0.61
SDC2-205ENST00000520233 NSUN3Q9H649 340 aaKnown RBP18.86■□□□□ 0.61
SDC2-205ENST00000520233 TLE6Q9H808 572 aa18.86■□□□□ 0.61
SDC2-205ENST00000520233 ARHGAP20Q9P2F6 1191 aa18.86■□□□□ 0.61
SDC2-205ENST00000520233 SSU72P8A0A1W2PR75 194 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 AP1G2O75843 785 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 GLUD1P00367 558 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 CFHP08603 1231 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 HAPLN1P10915 354 aaPredicted RBP18.85■□□□□ 0.61
SDC2-205ENST00000520233 FECHP22830 423 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 CYP2F1P24903 491 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 ELF1P32519 619 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 CDR1P51861 262 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 BCAT1P54687 386 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 FMO1Q01740 532 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 DUSP4Q13115 394 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 DUSP6Q16828 381 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 RBM23Q86U06 439 aaKnown RBP18.85■□□□□ 0.61
SDC2-205ENST00000520233 TTC30AQ86WT1 665 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 TCEAL8Q8IYN2 117 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 SLC22A17Q8WUG5 538 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 PPP1R9BQ96SB3 815 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 DUSP16Q9BY84 665 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 RHOBTB2Q9BYZ6 727 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 LHX5Q9H2C1 402 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 PDCL3Q9H2J4 239 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 CSNK1G1Q9HCP0 422 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 KRT82Q9NSB4 513 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 FBXW11Q9UKB1 542 aa18.85■□□□□ 0.61
SDC2-205ENST00000520233 M0QYV0 167 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms