RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 RAI2Q9Y5P3 530 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 APC2O95996 2303 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 CACNA1EQ15878 2313 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 URB1O60287 2271 aaKnown RBP5.34□□□□□ -1.55
SDCBP-207ENST00000520168 J3QKU1 62 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 DCLK1O15075 740 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 B4GALT5O43286 388 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 SEC24AO95486 1093 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 ITGB2P05107 769 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 PTMAP06454 111 aaKnown RBP5.34□□□□□ -1.55
SDCBP-207ENST00000520168 SYPP08247 313 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 SERPINF2P08697 491 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 FTH1P19P0C7X4 201 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 GCFC2P16383 781 aaKnown RBP5.34□□□□□ -1.55
SDCBP-207ENST00000520168 GJA1P17302 382 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 GLRA2P23416 452 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 ABCG1P45844 678 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 MAPK8P45983 427 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 YARSP54577 528 aaKnown RBP5.34□□□□□ -1.55
SDCBP-207ENST00000520168 ARPP19P56211 112 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 GFPT1Q06210 699 aaPredicted RBP5.34□□□□□ -1.55
SDCBP-207ENST00000520168 TNK2Q07912 1038 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 PRPF4BQ13523 1007 aaKnown RBP5.34□□□□□ -1.55
SDCBP-207ENST00000520168 PDGFRLQ15198 375 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 TRIP6Q15654 476 aaKnown RBP5.34□□□□□ -1.55
SDCBP-207ENST00000520168 HSF5Q4G112 596 aaPredicted RBP5.34□□□□□ -1.55
SDCBP-207ENST00000520168 GPR158Q5T848 1215 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 TTC22Q5TAA0 569 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 GALNT17Q6IS24 598 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 CC2D1AQ6P1N0 951 aaPredicted RBP5.34□□□□□ -1.55
SDCBP-207ENST00000520168 KRT25Q7Z3Z0 450 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 GLRX5Q86SX6 157 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 CDR2LQ86X02 465 aaPredicted RBP5.34□□□□□ -1.55
SDCBP-207ENST00000520168 TMC8Q8IU68 726 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 GALNT15Q8N3T1 639 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 CPA6Q8N4T0 437 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 C3orf58Q8NDZ4 430 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 MCPH1Q8NEM0 835 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 EPS8L1Q8TE68 723 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 PSMG2Q969U7 264 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 ZFYVE19Q96K21 471 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 TBC1D32Q96NH3 1257 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 P2RY13Q9BPV8 354 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 FAM83CQ9BQN1 747 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 LRRC3Q9BY71 257 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 RNF26Q9BY78 433 aaPredicted RBP5.34□□□□□ -1.55
SDCBP-207ENST00000520168 LRRC2Q9BYS8 371 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 ATXN3LQ9H3M9 355 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 FZD8Q9H461 694 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 PDZD7Q9H5P4 517 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 TASP1Q9H6P5 420 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 KCNMB3Q9NPA1 279 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 XPNPEP1Q9NQW7 623 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 ANKEF1Q9NU02 776 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 DNAAF2Q9NVR5 837 aaKnown RBP5.34□□□□□ -1.55
SDCBP-207ENST00000520168 DDX25Q9UHL0 483 aaKnown RBP5.34□□□□□ -1.55
SDCBP-207ENST00000520168 FBXL5Q9UKA1 691 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 VAV3Q9UKW4 847 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 SLC6A14Q9UN76 642 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 YIPF1Q9Y548 306 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 NUB1Q9Y5A7 615 aa5.34□□□□□ -1.55
SDCBP-207ENST00000520168 MYH11P35749 1972 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 ANAPC1Q9H1A4 1944 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 PHLPP2Q6ZVD8 1323 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 KLF18A0A0U1RQI7 1052 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 LRRIQ4A6NIV6 560 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 OR6C75A6NL08 312 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 EML1O00423 815 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 ACKR2O00590 384 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 PODXLO00592 558 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 SLC27A2O14975 620 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 AP5Z1O43299 807 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 EDIL3O43854 480 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 LYPLA2O95372 231 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 BAG4O95429 457 aaKnown RBP5.33□□□□□ -1.56
SDCBP-207ENST00000520168 TDP2O95551 362 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 EGFP01133 1207 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 PROCP04070 461 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 XRCC6P12956 609 aaKnown RBP eCLIP5.33□□□□□ -1.56
SDCBP-207ENST00000520168 MX2P20592 715 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 GABRR2P28476 465 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 MARCKSP29966 332 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-207ENST00000520168 CDC27P30260 824 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 HOXC13P31276 330 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 AVPR1AP37288 418 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 BRCC3P46736 316 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 EFNA5P52803 228 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 YWHAHQ04917 246 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-207ENST00000520168 BFSP1Q12934 665 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 NR1H3Q13133 447 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 KRT32Q14532 448 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 ZNF268Q14587 947 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-207ENST00000520168 VEPH1Q14D04 833 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 PPP2R5AQ15172 486 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 NECTIN1Q15223 517 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 LYSMD4Q5XG99 296 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 CD300LGQ6UXG3 332 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 DHX32Q7L7V1 743 aaKnown RBP5.33□□□□□ -1.56
SDCBP-207ENST00000520168 SLFN12Q8IYM2 578 aa5.33□□□□□ -1.56
SDCBP-207ENST00000520168 GALNT6Q8NCL4 622 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms