RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 PRAMEF33A0A0G2JMD5 474 aa3.81□□□□□ -1.8
ATP6V1C1-204ENST00000518959 PRAMEF10O60809 474 aa3.81□□□□□ -1.8
ATP6V1C1-204ENST00000518959 TUBB4AP04350 444 aa3.81□□□□□ -1.8
ATP6V1C1-204ENST00000518959 EBLN1P0CF75 366 aa3.81□□□□□ -1.8
ATP6V1C1-204ENST00000518959 HYAL1Q12794 435 aa3.81□□□□□ -1.8
ATP6V1C1-204ENST00000518959 SART3Q15020 963 aaKnown RBP3.81□□□□□ -1.8
ATP6V1C1-204ENST00000518959 PCBP1Q15365 356 aaKnown RBP eCLIP3.81□□□□□ -1.8
ATP6V1C1-204ENST00000518959 SEPT7Q16181 437 aaKnown RBP3.81□□□□□ -1.8
ATP6V1C1-204ENST00000518959 OTUD7BQ6GQQ9 843 aa3.81□□□□□ -1.8
ATP6V1C1-204ENST00000518959 Q6ZVL8 140 aa3.81□□□□□ -1.8
ATP6V1C1-204ENST00000518959 HOMER1Q86YM7 354 aa3.81□□□□□ -1.8
ATP6V1C1-204ENST00000518959 Q8NA96 180 aa3.81□□□□□ -1.8
ATP6V1C1-204ENST00000518959 GPR101Q96P66 508 aaPredicted RBP3.81□□□□□ -1.8
ATP6V1C1-204ENST00000518959 MYOCQ99972 504 aa3.81□□□□□ -1.8
ATP6V1C1-204ENST00000518959 TMEM79Q9BSE2 394 aa3.81□□□□□ -1.8
ATP6V1C1-204ENST00000518959 LDAHQ9H6V9 325 aa3.81□□□□□ -1.8
ATP6V1C1-204ENST00000518959 LANCL2Q9NS86 450 aa3.81□□□□□ -1.8
ATP6V1C1-204ENST00000518959 SH3BP4Q9P0V3 963 aa3.81□□□□□ -1.8
ATP6V1C1-204ENST00000518959 EDARQ9UNE0 448 aa3.81□□□□□ -1.8
ATP6V1C1-204ENST00000518959 PARP4Q9UKK3 1724 aaKnown RBP3.81□□□□□ -1.8
ATP6V1C1-204ENST00000518959 ALS2Q96Q42 1657 aa3.81□□□□□ -1.8
ATP6V1C1-204ENST00000518959 SMIM22K7EJ46 135 aa3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 TEX33O43247 280 aa3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 FCER1AP12319 257 aa3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 DRD4P21917 467 aa3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 ARHGAP25P42331 645 aa3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 LINC00205P59089 165 aa3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 OCRLQ01968 901 aa3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 TERF2Q15554 542 aa3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 PROSER3Q2NL68 480 aa3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 CD300EQ496F6 205 aaPredicted RBP3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 CT83Q5H943 113 aa3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 GJC2Q5T442 439 aaPredicted RBP3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 PRAMEF17Q5VTA0 474 aa3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 CNNM4Q6P4Q7 775 aa3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 C16orf86Q6ZW13 317 aa3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 UBXN4Q92575 508 aa3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 MARK4Q96L34 752 aa3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 PRSS22Q9GZN4 317 aa3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 SPTLC3Q9NUV7 552 aa3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 TMEM140Q9NV12 185 aa3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 SLC23A1Q9UHI7 598 aa3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 MYOM1P52179 1685 aa3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 CFAP65Q6ZU64 1925 aaKnown RBP3.8□□□□□ -1.8
ATP6V1C1-204ENST00000518959 MYO5BQ9ULV0 1848 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 ANKRD36BQ8N2N9 1353 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 USP47Q96K76 1375 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 ABCA3Q99758 1704 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 SHANK3Q9BYB0 1731 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 TRPM3Q9HCF6 1732 aaPredicted RBP3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 SOCS2O14508 198 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 NR2F6P10588 404 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 VEGFAP15692 232 aaPredicted RBP3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 KCNA2P16389 499 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 KRTAP5-9P26371 169 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 MCAMP43121 646 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 NXPH1P58417 271 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 CDK17Q00537 523 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 ITIH3Q06033 890 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 SLFN5Q08AF3 891 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 KRTAP5-4Q6L8H1 288 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 SEM1Q6ZVN7 128 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 NIM1KQ8IY84 436 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 PPM1KQ8N3J5 372 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 NANOGP1Q8N7R0 232 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 PRSS3P2Q8NHM4 247 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 DRC1Q96MC2 740 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 PPP1R10Q96QC0 940 aaKnown RBP3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 TARS2Q9BW92 718 aaKnown RBP3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 CDK19Q9BWU1 502 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 KLC4Q9NSK0 619 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 FANCLQ9NW38 375 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 AJAP1Q9UKB5 411 aaPredicted RBP3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 NOC2LQ9Y3T9 749 aaKnown RBP3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 AFG3L2Q9Y4W6 797 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 ACTL7AQ9Y615 435 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 GOLGB1Q14789 3259 aaKnown RBP3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 KIF1BO60333 1816 aa3.79□□□□□ -1.8
ATP6V1C1-204ENST00000518959 CPSF1Q10570 1443 aaKnown RBP3.78□□□□□ -1.8
ATP6V1C1-204ENST00000518959 PPIP5K1Q6PFW1 1433 aa3.78□□□□□ -1.8
ATP6V1C1-204ENST00000518959 PEAK1Q9H792 1746 aa3.78□□□□□ -1.8
ATP6V1C1-204ENST00000518959 LMO7Q8WWI1 1683 aa3.78□□□□□ -1.8
ATP6V1C1-204ENST00000518959 TRPM1Q7Z4N2 1603 aa3.78□□□□□ -1.8
ATP6V1C1-204ENST00000518959 SMIM35A0A1B0GVV1 85 aa3.78□□□□□ -1.8
ATP6V1C1-204ENST00000518959 TCRBV7S2A1N4TA0A589 114 aa3.78□□□□□ -1.8
ATP6V1C1-204ENST00000518959 TISP43B9A030 160 aa3.78□□□□□ -1.8
ATP6V1C1-204ENST00000518959 JTBO76095 146 aa3.78□□□□□ -1.8
ATP6V1C1-204ENST00000518959 PPP3CBP16298 524 aa3.78□□□□□ -1.8
ATP6V1C1-204ENST00000518959 SFPQP23246 707 aaKnown RBP eCLIP3.78□□□□□ -1.8
ATP6V1C1-204ENST00000518959 ADCYAP1R1P41586 468 aa3.78□□□□□ -1.8
ATP6V1C1-204ENST00000518959 LSSP48449 732 aa3.78□□□□□ -1.8
ATP6V1C1-204ENST00000518959 CTCFP49711 727 aaPredicted RBP3.78□□□□□ -1.8
ATP6V1C1-204ENST00000518959 CCT2P78371 535 aaKnown RBP3.78□□□□□ -1.8
ATP6V1C1-204ENST00000518959 TRIP6Q15654 476 aaKnown RBP3.78□□□□□ -1.8
ATP6V1C1-204ENST00000518959 UGT8Q16880 541 aa3.78□□□□□ -1.8
ATP6V1C1-204ENST00000518959 PLAC9Q5JTB6 97 aa3.78□□□□□ -1.8
ATP6V1C1-204ENST00000518959 CEP85Q6P2H3 762 aa3.78□□□□□ -1.8
ATP6V1C1-204ENST00000518959 Q6ZTC4 211 aa3.78□□□□□ -1.8
ATP6V1C1-204ENST00000518959 C11orf74Q86VG3 221 aa3.78□□□□□ -1.8
ATP6V1C1-204ENST00000518959 DHX37Q8IY37 1157 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms