RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 OR10T2Q8NGX3 314 aa13.82□□□□□ -0.2
PABPC1-205ENST00000518196 SHC3Q92529 594 aa13.82□□□□□ -0.2
PABPC1-205ENST00000518196 TMEM176AQ96HP8 235 aa13.82□□□□□ -0.2
PABPC1-205ENST00000518196 MRFAP1L1Q96HT8 127 aa13.82□□□□□ -0.2
PABPC1-205ENST00000518196 HEXIM2Q96MH2 286 aaKnown RBP13.82□□□□□ -0.2
PABPC1-205ENST00000518196 TMEM209Q96SK2 561 aa13.82□□□□□ -0.2
PABPC1-205ENST00000518196 NAA15Q9BXJ9 866 aaKnown RBP13.82□□□□□ -0.2
PABPC1-205ENST00000518196 EDEM3Q9BZQ6 932 aa13.82□□□□□ -0.2
PABPC1-205ENST00000518196 NLRC4Q9NPP4 1024 aa13.82□□□□□ -0.2
PABPC1-205ENST00000518196 LIMD1Q9UGP4 676 aa13.82□□□□□ -0.2
PABPC1-205ENST00000518196 MTCH2Q9Y6C9 303 aa13.82□□□□□ -0.2
PABPC1-205ENST00000518196 ITIH6Q6UXX5 1313 aa13.82□□□□□ -0.2
PABPC1-205ENST00000518196 MTCL1Q9Y4B5 1905 aaKnown RBP13.82□□□□□ -0.2
PABPC1-205ENST00000518196 FOXN3O00409 490 aaPredicted RBP13.81□□□□□ -0.2
PABPC1-205ENST00000518196 PER2O15055 1255 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 EPHB6O15197 1021 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 ADAM12O43184 909 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 HCRTO43612 131 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 CLASP2O75122 1294 aaKnown RBP13.81□□□□□ -0.2
PABPC1-205ENST00000518196 ATP2C2O75185 946 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 GLUD1P00367 558 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 PAEPP09466 180 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 TPM1P09493 284 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 OR4Q2P0C623 313 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 ELF1P32519 619 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 STAT1P42224 750 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 NRIP1P48552 1158 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 RAD23BP54727 409 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 PSMC1P62191 440 aaKnown RBP13.81□□□□□ -0.2
PABPC1-205ENST00000518196 ROR1Q01973 937 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 TRIM14Q14142 442 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 ADGRE1Q14246 886 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 FIGNQ5HY92 759 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 SPECC1LQ69YQ0 1117 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 FAM171BQ6P995 826 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 ELMSAN1Q6PJG2 1045 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 C4orf50Q6ZRC1 276 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 RBM23Q86U06 439 aaKnown RBP13.81□□□□□ -0.2
PABPC1-205ENST00000518196 PALB2Q86YC2 1186 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 SPATA2LQ8IUW3 424 aaPredicted RBP13.81□□□□□ -0.2
PABPC1-205ENST00000518196 FMNL3Q8IVF7 1028 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 VSTM4Q8IW00 320 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 SLC4A11Q8NBS3 891 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 RBBP8NLQ8NC74 664 aaPredicted RBP13.81□□□□□ -0.2
PABPC1-205ENST00000518196 B3GALNT2Q8NCR0 500 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 ZNF397Q8NF99 534 aaPredicted RBP13.81□□□□□ -0.2
PABPC1-205ENST00000518196 ANKK1Q8NFD2 765 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 ZNF461Q8TAF7 563 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 MYCBPAPQ8TBZ2 947 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 WHAMMQ8TF30 809 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 C2orf15Q8WU43 125 aaKnown RBP13.81□□□□□ -0.2
PABPC1-205ENST00000518196 CDX2Q99626 313 aaPredicted RBP13.81□□□□□ -0.2
PABPC1-205ENST00000518196 ELOVL4Q9GZR5 314 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 DPEP3Q9H4B8 488 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 GRPEL1Q9HAV7 217 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 CRTAC1Q9NQ79 661 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 HMGXB4Q9UGU5 601 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 DPP7Q9UHL4 492 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 AJAP1Q9UKB5 411 aaPredicted RBP13.81□□□□□ -0.2
PABPC1-205ENST00000518196 GTF3C4Q9UKN8 822 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 KIAA1257Q9ULG3 409 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 MAFFQ9ULX9 164 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 CNTN6Q9UQ52 1028 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 NME7Q9Y5B8 376 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 PCDHB5Q9Y5E4 795 aa13.81□□□□□ -0.2
PABPC1-205ENST00000518196 LAMA3Q16787 3333 aa13.8□□□□□ -0.2
PABPC1-205ENST00000518196 WDR27A2RRH5 827 aa13.8□□□□□ -0.2
PABPC1-205ENST00000518196 MYBPHLA2RUH7 354 aa13.8□□□□□ -0.2
PABPC1-205ENST00000518196 TGM5O43548 720 aa13.8□□□□□ -0.2
PABPC1-205ENST00000518196 CD19P15391 556 aa13.8□□□□□ -0.2
PABPC1-205ENST00000518196 CLCN4P51793 760 aa13.8□□□□□ -0.2
PABPC1-205ENST00000518196 BPIFB4P59827 614 aa13.8□□□□□ -0.2
PABPC1-205ENST00000518196 ORC1Q13415 861 aa13.8□□□□□ -0.2
PABPC1-205ENST00000518196 DUSP6Q16828 381 aa13.8□□□□□ -0.2
PABPC1-205ENST00000518196 TCEAL5Q5H9L2 206 aa13.8□□□□□ -0.2
PABPC1-205ENST00000518196 MDH1BQ5I0G3 518 aa13.8□□□□□ -0.2
PABPC1-205ENST00000518196 RNF19BQ6ZMZ0 732 aa13.8□□□□□ -0.2
PABPC1-205ENST00000518196 LRRTM3Q86VH5 581 aa13.8□□□□□ -0.2
PABPC1-205ENST00000518196 SPPL2BQ8TCT7 592 aa13.8□□□□□ -0.2
PABPC1-205ENST00000518196 MYLIPQ8WY64 445 aa13.8□□□□□ -0.2
PABPC1-205ENST00000518196 TWNKQ96RR1 684 aa13.8□□□□□ -0.2
PABPC1-205ENST00000518196 MED10Q9BTT4 135 aa13.8□□□□□ -0.2
PABPC1-205ENST00000518196 IGFLR1Q9H665 355 aa13.8□□□□□ -0.2
PABPC1-205ENST00000518196 AFF4Q9UHB7 1163 aaKnown RBP13.8□□□□□ -0.2
PABPC1-205ENST00000518196 MYO6Q9UM54 1294 aa13.8□□□□□ -0.2
PABPC1-205ENST00000518196 ATP8B3O60423 1300 aa13.8□□□□□ -0.2
PABPC1-205ENST00000518196 MYH10P35580 1976 aa13.8□□□□□ -0.2
PABPC1-205ENST00000518196 A0A1W2PQJ5 194 aa13.79□□□□□ -0.2
PABPC1-205ENST00000518196 MTMR11A4FU01 709 aa13.79□□□□□ -0.2
PABPC1-205ENST00000518196 F8VZ95 297 aa13.79□□□□□ -0.2
PABPC1-205ENST00000518196 RNF225M0QZC1 329 aaPredicted RBP13.79□□□□□ -0.2
PABPC1-205ENST00000518196 NCK2O43639 380 aa13.79□□□□□ -0.2
PABPC1-205ENST00000518196 ABLIM3O94929 683 aa13.79□□□□□ -0.2
PABPC1-205ENST00000518196 ADCY5O95622 1261 aa13.79□□□□□ -0.2
PABPC1-205ENST00000518196 CCDC172P0C7W6 258 aa13.79□□□□□ -0.2
PABPC1-205ENST00000518196 SRGAP2BP0DMP2 458 aa13.79□□□□□ -0.2
PABPC1-205ENST00000518196 VDRP11473 427 aa13.79□□□□□ -0.2
PABPC1-205ENST00000518196 ATF2P15336 505 aa13.79□□□□□ -0.2
PABPC1-205ENST00000518196 FOSL2P15408 326 aa13.79□□□□□ -0.2
PABPC1-205ENST00000518196 SOX5P35711 763 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms