RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 FSD1LQ9BXM9 530 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 TTYH3Q9C0H2 523 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 GLOD4Q9HC38 313 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 SARS2Q9NP81 518 aaKnown RBP3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 DUSP22Q9NRW4 184 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 ADAMTS5Q9UNA0 930 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 SHOC2Q9UQ13 582 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PCDHA1Q9Y5I3 950 aa3.29□□□□□ -1.88
SCARNA16.2-201ENST00000516520 SBNO2Q9Y2G9 1366 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 ZNF521Q96K83 1311 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 WASHC2CQ9Y4E1 1318 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 H7C1Q1 480 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 DNAJB5O75953 348 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 TJP3O95049 919 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 IL33O95760 270 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 DLDP09622 509 aaKnown RBP3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 ENGP17813 658 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 AKAP5P24588 427 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 MMP13P45452 471 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 KCNJ5P48544 419 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 CCT4P50991 539 aaKnown RBP3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PLCD1P51178 756 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PDE1AP54750 535 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 SOX8P57073 446 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 LILRA4P59901 499 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 HOXA4Q00056 320 aaPredicted RBP3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 EXOSC9Q06265 439 aaKnown RBP3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 TBC1D25Q3MII6 688 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 CERKLQ49MI3 558 aaPredicted RBP3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 ARHGAP40Q5TG30 622 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 MTHFD1LQ6UB35 978 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 TRIM72Q6ZMU5 477 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 GALNT16Q8N428 558 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 ATG4AQ8WYN0 398 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 DAZAP1Q96EP5 407 aaKnown RBP3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 SLC35A4Q96G79 324 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 CDK5RAP3Q96JB5 506 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 NUP88Q99567 741 aaPredicted RBP3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 ASPSCR1Q9BZE9 553 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 CNNM1Q9NRU3 951 aa3.28□□□□□ -1.88
SCARNA16.2-201ENST00000516520 H3BUI4 141 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 ADAMTS3O15072 1205 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 DCLK1O15075 740 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 KCNAB3O43448 404 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 USP1O94782 785 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 UNC5CO95185 931 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 FESP07332 822 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 GRPP07492 148 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 CYP2C9P11712 490 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 XRCC6P12956 609 aaKnown RBP eCLIP3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 LRPAP1P30533 357 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 CYP4F2P78329 520 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 NKX6-1P78426 367 aaPredicted RBP3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 GPSM2P81274 684 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 PLS1Q14651 629 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 SUPT20HL1Q3ZLR7 823 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 CEP78Q5JTW2 689 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 RGS7BPQ6MZT1 257 aaPredicted RBP3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 NAPRTQ6XQN6 538 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 CATSPERGQ6ZRH7 1159 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 ZBTB46Q86UZ6 589 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 PNLDC1Q8NA58 520 aaKnown RBP3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 PCSK9Q8NBP7 692 aaKnown RBP3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 ABHD11Q8NFV4 315 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 GLG1Q92896 1179 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 HSPBAP1Q96EW2 488 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 MVB12AQ96EY5 273 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 ZNF48Q96MX3 618 aaPredicted RBP3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 ASB2Q96Q27 587 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 QTRT1Q9BXR0 403 aaKnown RBP3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 PRSS22Q9GZN4 317 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 TUBA8Q9NY65 449 aaPredicted RBP3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 CCNL1Q9UK58 526 aaPredicted RBP3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 SSX2IPQ9Y2D8 614 aa3.27□□□□□ -1.89
SCARNA16.2-201ENST00000516520 FNDC1Q4ZHG4 1894 aaPredicted RBP3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 CYP2D7A0A087X1C5 515 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 A1L4Q6 167 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 POC1B-GALNT4F8VUJ3 575 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 UBE2Q2LH0YL09 131 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 PPEF2O14830 753 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 PRKCBP05771 671 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 THP07101 528 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 CHRM5P08912 532 aaPredicted RBP3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 NHLRC4P0CG21 123 aaPredicted RBP3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 HOXB6P17509 224 aaKnown RBP3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 HDCP19113 662 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 PDE6CP51160 858 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 WNT3P56703 355 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 EVA1CP58658 441 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 LAMB3Q13751 1172 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 PXDC1Q5TGL8 231 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 Q6ZWC4 215 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 CATIPQ7Z7H3 387 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 CHSY1Q86X52 802 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 GALNT4Q8N4A0 578 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 CYP2W1Q8TAV3 490 aa3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 ZCRB1Q8TBF4 217 aaKnown RBP3.26□□□□□ -1.89
SCARNA16.2-201ENST00000516520 XAGE5Q8WWM1 108 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms