RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 DPCDQ9BVM2 203 aaPredicted RBP2.1□□□□□ -2.07
RNU6-561P-201ENST00000516222 FSD1LQ9BXM9 530 aa2.1□□□□□ -2.07
RNU6-561P-201ENST00000516222 GLOD4Q9HC38 313 aa2.1□□□□□ -2.07
RNU6-561P-201ENST00000516222 TRMT13Q9NUP7 481 aaKnown RBP2.1□□□□□ -2.07
RNU6-561P-201ENST00000516222 MAFFQ9ULX9 164 aa2.1□□□□□ -2.07
RNU6-561P-201ENST00000516222 SLC45A2Q9UMX9 530 aa2.1□□□□□ -2.07
RNU6-561P-201ENST00000516222 GPR45Q9Y5Y3 372 aa2.1□□□□□ -2.07
RNU6-561P-201ENST00000516222 WASHC2AQ641Q2 1341 aa2.1□□□□□ -2.07
RNU6-561P-201ENST00000516222 ZMYM2Q9UBW7 1377 aa2.1□□□□□ -2.07
RNU6-561P-201ENST00000516222 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 ZNF785A8K8V0 405 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 BTBD19C9JJ37 291 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 VPS4BO75351 444 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 CDC45O75419 566 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 GCATO75600 419 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 GNAI2P04899 355 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 PRKCBP05771 671 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 FESP07332 822 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 GJB1P08034 283 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 PSG1P11464 419 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 PHKG2P15735 406 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 GCLCP48506 637 aaPredicted RBP2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 MTNR1BP49286 362 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 PSMC1P62191 440 aaKnown RBP2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 STRN3Q13033 797 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 ASIC2Q16515 512 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 LEXMQ3ZCV2 418 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 CCDC93Q567U6 631 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 C9orf50Q5SZB4 431 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 FCRL6Q6DN72 434 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 C16orf71Q8IYS4 520 aaPredicted RBP2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 ARFGAP1Q8N6T3 406 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 RBMXL3Q8N7X1 1067 aaKnown RBP2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 OR2I1PQ8NGU4 316 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 MPLKIPQ8TAP9 179 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 OSR1Q8TAX0 266 aaPredicted RBP2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 IFI44Q8TCB0 444 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 NRG4Q8WWG1 115 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 NR4A3Q92570 626 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 ZFYVE19Q96K21 471 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 CLPTM1LQ96KA5 538 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 PPP1R10Q96QC0 940 aaKnown RBP2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 MEIS3Q99687 375 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 SMOC2Q9H3U7 446 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 C14orf119Q9NWQ9 140 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 SELENONQ9NZV5 590 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 PCDHA13Q9Y5I0 950 aa2.09□□□□□ -2.07
RNU6-561P-201ENST00000516222 ADAM10O14672 748 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 PDHA1P08559 390 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 LPOP22079 712 aaPredicted RBP2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 PCSK6P29122 969 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 LIPAP38571 399 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 GPR3P46089 330 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 ID4P47928 161 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 ZNF135P52742 658 aaPredicted RBP2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 ZNF280AP59817 542 aaPredicted RBP2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 CLUL1Q15846 466 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 FAM187BQ17R55 369 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 TKFCQ3LXA3 575 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 FLYWCH1Q4VC44 716 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 ZNF585BQ52M93 769 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 L1TD1Q5T7N2 865 aaKnown RBP2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 VPS53Q5VIR6 699 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 GFI1BQ5VTD9 330 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 ZNF549Q6P9A3 640 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 KIRREL2Q6UWL6 708 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 TMEM108Q6UXF1 575 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 CMIPQ8IY22 773 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 FAM109AQ8N4B1 249 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 MOGAT1Q96PD6 335 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 SIGLEC11Q96RL6 698 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 EFHD1Q9BUP0 239 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 CIPCQ9C0C6 399 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 CCM2LQ9NUG4 571 aaPredicted RBP2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 MCM8Q9UJA3 840 aa2.08□□□□□ -2.08
RNU6-561P-201ENST00000516222 A1L4Q6 167 aa2.07□□□□□ -2.08
RNU6-561P-201ENST00000516222 C4orf47A7E2U8 309 aa2.07□□□□□ -2.08
RNU6-561P-201ENST00000516222 E9PLN8 166 aa2.07□□□□□ -2.08
RNU6-561P-201ENST00000516222 ACOT8O14734 319 aa2.07□□□□□ -2.08
RNU6-561P-201ENST00000516222 GAS8-AS1O95177 125 aa2.07□□□□□ -2.08
RNU6-561P-201ENST00000516222 EYA4O95677 639 aa2.07□□□□□ -2.08
RNU6-561P-201ENST00000516222 SYF2O95926 243 aaKnown RBP2.07□□□□□ -2.08
RNU6-561P-201ENST00000516222 RARBP10826 455 aa2.07□□□□□ -2.08
RNU6-561P-201ENST00000516222 MYCLP12524 364 aaPredicted RBP2.07□□□□□ -2.08
RNU6-561P-201ENST00000516222 CHRM3P20309 590 aa2.07□□□□□ -2.08
RNU6-561P-201ENST00000516222 PXNP49023 591 aaPredicted RBP2.07□□□□□ -2.08
RNU6-561P-201ENST00000516222 CLCN2P51788 898 aa2.07□□□□□ -2.08
RNU6-561P-201ENST00000516222 HILS1P60008 231 aa2.07□□□□□ -2.08
RNU6-561P-201ENST00000516222 RPS13P62277 151 aaKnown RBP2.07□□□□□ -2.08
RNU6-561P-201ENST00000516222 TARDBPQ13148 414 aaKnown RBP eCLIP2.07□□□□□ -2.08
RNU6-561P-201ENST00000516222 E2F2Q14209 437 aa2.07□□□□□ -2.08
RNU6-561P-201ENST00000516222 AMOTQ4VCS5 1084 aa2.07□□□□□ -2.08
RNU6-561P-201ENST00000516222 CT47A1Q5JQC4 288 aaPredicted RBP2.07□□□□□ -2.08
RNU6-561P-201ENST00000516222 MANEAQ5SRI9 462 aa2.07□□□□□ -2.08
RNU6-561P-201ENST00000516222 DENND2CQ68D51 928 aa2.07□□□□□ -2.08
RNU6-561P-201ENST00000516222 CAPRIN2Q6IMN6 1127 aaKnown RBP2.07□□□□□ -2.08
RNU6-561P-201ENST00000516222 FBXL22Q6P050 247 aa2.07□□□□□ -2.08
RNU6-561P-201ENST00000516222 DEF8Q6ZN54 512 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms