RNA–Protein interactions for RNA: ENST00000515748.2

CSNK1A1-206, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-206ENST00000515748 WDR49Q8IV35 697 aa10.09□□□□□ -0.79
CSNK1A1-206ENST00000515748 EFCAB13Q8IY85 973 aa10.09□□□□□ -0.79
CSNK1A1-206ENST00000515748 SMYD4Q8IYR2 804 aaPredicted RBP10.09□□□□□ -0.79
CSNK1A1-206ENST00000515748 C3orf58Q8NDZ4 430 aa10.09□□□□□ -0.79
CSNK1A1-206ENST00000515748 BEST2Q8NFU1 509 aa10.09□□□□□ -0.79
CSNK1A1-206ENST00000515748 CXorf38Q8TB03 319 aa10.09□□□□□ -0.79
CSNK1A1-206ENST00000515748 GPT2Q8TD30 523 aa10.09□□□□□ -0.79
CSNK1A1-206ENST00000515748 SLC39A7Q92504 469 aa10.09□□□□□ -0.79
CSNK1A1-206ENST00000515748 ERCC4Q92889 916 aaPredicted RBP10.09□□□□□ -0.79
CSNK1A1-206ENST00000515748 DHTKD1Q96HY7 919 aaPredicted RBP10.09□□□□□ -0.79
CSNK1A1-206ENST00000515748 ZC3H10Q96K80 434 aaKnown RBP10.09□□□□□ -0.79
CSNK1A1-206ENST00000515748 GZF1Q9H116 711 aaPredicted RBP10.09□□□□□ -0.79
CSNK1A1-206ENST00000515748 NUP62CLQ9H1M0 184 aa10.09□□□□□ -0.79
CSNK1A1-206ENST00000515748 PCIF1Q9H4Z3 704 aa10.09□□□□□ -0.79
CSNK1A1-206ENST00000515748 GOLGA2P5Q9HBQ8 144 aa10.09□□□□□ -0.79
CSNK1A1-206ENST00000515748 C2orf42Q9NWW7 574 aa10.09□□□□□ -0.79
CSNK1A1-206ENST00000515748 DOCK6Q96HP0 2047 aa10.09□□□□□ -0.79
CSNK1A1-206ENST00000515748 CFAP46Q8IYW2 2715 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 TICRRQ7Z2Z1 1910 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 ANO9A1A5B4 782 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 GOLGA8IPA6NC78 632 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 GOLGA8JA6NMD2 632 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 J3QKU1 62 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 M0QZQ0 153 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 PIRO00625 290 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 CDX4O14627 284 aaPredicted RBP10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 PSMA7O14818 248 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 CLIC2O15247 247 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 SLC16A3O15427 465 aaKnown RBP10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 EXOC3O60645 756 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 TADA2AO75478 443 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 B3GAT3O94766 335 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 CAVIN2O95810 425 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 FGFR3P22607 806 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 NR2F2P24468 414 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 RPL13P26373 211 aaKnown RBP10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 GLUD2P49448 558 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 CYP2J2P51589 502 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 STIM1Q13586 685 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 USP41Q3LFD5 358 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 TANGO2Q6ICL3 276 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 PDXDC1Q6P996 788 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 CHCHD4Q8N4Q1 142 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 CACTINQ8WUQ7 758 aaKnown RBP10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 UBL7Q96S82 380 aaPredicted RBP10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 CGRRF1Q99675 332 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 TTPALQ9BTX7 342 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 GPR62Q9BZJ7 368 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 CCDC86Q9H6F5 360 aaKnown RBP10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 PDE11AQ9HCR9 933 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 TMEM9BQ9NQ34 198 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 SCUBE2Q9NQ36 999 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 ITGA11Q9UKX5 1188 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 ACACAQ13085 2346 aa10.08□□□□□ -0.8
CSNK1A1-206ENST00000515748 PCNX2A6NKB5 2137 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 LNP1A1A4G5 178 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 PPP1R3GB7ZBB8 358 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 SYN3O14994 580 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 AKAP3O75969 853 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 CCDC192P0DO97 292 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 CCNE1P24864 410 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 MCM4P33991 863 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 RDXP35241 583 aaKnown RBP10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 PNPLA4P41247 253 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 AP3M2P53677 418 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 CAMK4Q16566 473 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 UAP1L1Q3KQV9 507 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 RTP2Q5QGT7 225 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 C9orf57Q5W0N0 161 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 INTS8Q75QN2 995 aaKnown RBP10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 USP37Q86T82 979 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 GLYCTKQ8IVS8 523 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 NPAS3Q8IXF0 933 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 LRRC52Q8N7C0 313 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 C1orf127Q8N9H9 656 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 TMC2Q8TDI7 906 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 MCRS1Q96EZ8 462 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 SUSD3Q96L08 255 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 TSG101Q99816 390 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 BRD9Q9H8M2 597 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 RBM12Q9NTZ6 932 aaKnown RBP10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 INTS13Q9NVM9 706 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 DPP3Q9NY33 737 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 FNIP2Q9P278 1114 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 CACNG4Q9UBN1 327 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 MAPK8IP1Q9UQF2 711 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 FRMD4BQ9Y2L6 1034 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 RAXQ9Y2V3 346 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 URB1O60287 2271 aaKnown RBP10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 PTPRJQ12913 1337 aa10.07□□□□□ -0.8
CSNK1A1-206ENST00000515748 SPAARA0A1B0GVQ0 90 aa10.06□□□□□ -0.8
CSNK1A1-206ENST00000515748 BICDL2A1A5D9 508 aa10.06□□□□□ -0.8
CSNK1A1-206ENST00000515748 ARHGEF37A1IGU5 675 aa10.06□□□□□ -0.8
CSNK1A1-206ENST00000515748 H0Y626 953 aa10.06□□□□□ -0.8
CSNK1A1-206ENST00000515748 IKBKBO14920 756 aa10.06□□□□□ -0.8
CSNK1A1-206ENST00000515748 TRIM16O95361 564 aa10.06□□□□□ -0.8
CSNK1A1-206ENST00000515748 HNRNPA1P09651 372 aaKnown RBP eCLIP10.06□□□□□ -0.8
CSNK1A1-206ENST00000515748 CD44P16070 742 aaKnown RBP10.06□□□□□ -0.8
CSNK1A1-206ENST00000515748 PTMSP20962 102 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms