RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 LAMA1P25391 3075 aa19.76■□□□□ 0.75
SPOP-220ENST00000515508 MAP1BP46821 2468 aaKnown RBP19.76■□□□□ 0.75
SPOP-220ENST00000515508 VPS37CA5D8V6 355 aaPredicted RBP19.76■□□□□ 0.75
SPOP-220ENST00000515508 RPP40O75818 363 aaKnown RBP19.76■□□□□ 0.75
SPOP-220ENST00000515508 AKAP3O75969 853 aa19.76■□□□□ 0.75
SPOP-220ENST00000515508 CYP2F1P24903 491 aa19.76■□□□□ 0.75
SPOP-220ENST00000515508 LIMK1P53667 647 aa19.76■□□□□ 0.75
SPOP-220ENST00000515508 MYL7Q01449 175 aa19.76■□□□□ 0.75
SPOP-220ENST00000515508 FAM160A1Q05DH4 1040 aa19.76■□□□□ 0.75
SPOP-220ENST00000515508 SDHAF4Q5VUM1 108 aa19.76■□□□□ 0.75
SPOP-220ENST00000515508 RRAGBQ5VZM2 374 aa19.76■□□□□ 0.75
SPOP-220ENST00000515508 CC2D1AQ6P1N0 951 aaPredicted RBP19.76■□□□□ 0.75
SPOP-220ENST00000515508 TMEM206Q9H813 350 aa19.76■□□□□ 0.75
SPOP-220ENST00000515508 TBC1D7Q9P0N9 293 aa19.76■□□□□ 0.75
SPOP-220ENST00000515508 PCDHB13Q9Y5F0 798 aa19.76■□□□□ 0.75
SPOP-220ENST00000515508 ATG2BQ96BY7 2078 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 PTPRDP23468 1912 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 CNOT1A5YKK6 2376 aaKnown RBP19.75■□□□□ 0.75
SPOP-220ENST00000515508 GABRDO14764 452 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 RNF40O75150 1001 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 EPN2O95208 641 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 EGFP01133 1207 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 DRD1P21728 446 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 ACAT1P24752 427 aaKnown RBP19.75■□□□□ 0.75
SPOP-220ENST00000515508 TXLNAP40222 546 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 PXNP49023 591 aaPredicted RBP19.75■□□□□ 0.75
SPOP-220ENST00000515508 USP4Q13107 963 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 CUL4AQ13619 759 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 MTF1Q14872 753 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 ZNF77Q15935 545 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 DDR2Q16832 855 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 CCDC142Q17RM4 750 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 SCARA3Q6AZY7 606 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 CACNA2D4Q7Z3S7 1137 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 OSTM1Q86WC4 334 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 CAMKK1Q8N5S9 505 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 TOP6BLQ8N6T0 577 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 FUBP3Q96I24 572 aaKnown RBP eCLIP19.75■□□□□ 0.75
SPOP-220ENST00000515508 FAM84AQ96KN4 292 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 CBWD1Q9BRT8 395 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 FGFBP2Q9BYJ0 223 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 FBRSL1Q9HCM7 1045 aaKnown RBP19.75■□□□□ 0.75
SPOP-220ENST00000515508 SIX4Q9UIU6 781 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 GTF3C4Q9UKN8 822 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 SLC8A2Q9UPR5 921 aa19.75■□□□□ 0.75
SPOP-220ENST00000515508 MORC2Q9Y6X9 1032 aaPredicted RBP19.75■□□□□ 0.75
SPOP-220ENST00000515508 ZNF806P0C7X5 589 aa19.74■□□□□ 0.75
SPOP-220ENST00000515508 GJA4P35212 333 aa19.74■□□□□ 0.75
SPOP-220ENST00000515508 LHX1P48742 406 aa19.74■□□□□ 0.75
SPOP-220ENST00000515508 FBXO43Q4G163 708 aa19.74■□□□□ 0.75
SPOP-220ENST00000515508 KBTBD6Q86V97 674 aa19.74■□□□□ 0.75
SPOP-220ENST00000515508 ADGRF2Q8IZF7 708 aa19.74■□□□□ 0.75
SPOP-220ENST00000515508 CPA6Q8N4T0 437 aa19.74■□□□□ 0.75
SPOP-220ENST00000515508 CSGALNACT2Q8N6G5 542 aa19.74■□□□□ 0.75
SPOP-220ENST00000515508 OSCP1Q8WVF1 389 aa19.74■□□□□ 0.75
SPOP-220ENST00000515508 DDX1Q92499 740 aaKnown RBP19.74■□□□□ 0.75
SPOP-220ENST00000515508 CLIC6Q96NY7 704 aa19.74■□□□□ 0.75
SPOP-220ENST00000515508 P2RY13Q9BPV8 354 aa19.74■□□□□ 0.75
SPOP-220ENST00000515508 MTMR12Q9C0I1 747 aa19.74■□□□□ 0.75
SPOP-220ENST00000515508 ARRDC1-AS1Q9H2J1 176 aa19.74■□□□□ 0.75
SPOP-220ENST00000515508 SNX9Q9Y5X1 595 aa19.74■□□□□ 0.75
SPOP-220ENST00000515508 SDK1Q7Z5N4 2213 aa19.74■□□□□ 0.75
SPOP-220ENST00000515508 USP24Q9UPU5 2620 aa19.73■□□□□ 0.75
SPOP-220ENST00000515508 PDCP20941 246 aa19.73■□□□□ 0.75
SPOP-220ENST00000515508 PCSK1P29120 753 aa19.73■□□□□ 0.75
SPOP-220ENST00000515508 MAGEA11P43364 429 aa19.73■□□□□ 0.75
SPOP-220ENST00000515508 GALK1P51570 392 aa19.73■□□□□ 0.75
SPOP-220ENST00000515508 RBP5P82980 135 aa19.73■□□□□ 0.75
SPOP-220ENST00000515508 RESTQ13127 1097 aa19.73■□□□□ 0.75
SPOP-220ENST00000515508 AASDHQ4L235 1098 aaPredicted RBP19.73■□□□□ 0.75
SPOP-220ENST00000515508 NAIF1Q69YI7 327 aaPredicted RBP19.73■□□□□ 0.75
SPOP-220ENST00000515508 CCDC73Q6ZRK6 1079 aa19.73■□□□□ 0.75
SPOP-220ENST00000515508 LIMS2Q7Z4I7 341 aa19.73■□□□□ 0.75
SPOP-220ENST00000515508 SPATA2LQ8IUW3 424 aaPredicted RBP19.73■□□□□ 0.75
SPOP-220ENST00000515508 SYCP3Q8IZU3 236 aa19.73■□□□□ 0.75
SPOP-220ENST00000515508 EXOC4Q96A65 974 aa19.73■□□□□ 0.75
SPOP-220ENST00000515508 ZC3H10Q96K80 434 aaKnown RBP19.73■□□□□ 0.75
SPOP-220ENST00000515508 SLC22A12Q96S37 553 aa19.73■□□□□ 0.75
SPOP-220ENST00000515508 ECT2Q9H8V3 914 aa19.73■□□□□ 0.75
SPOP-220ENST00000515508 PDE11AQ9HCR9 933 aa19.73■□□□□ 0.75
SPOP-220ENST00000515508 PCDHGA5Q9Y5G8 931 aa19.73■□□□□ 0.75
SPOP-220ENST00000515508 TRAV19A0A0A6YYK7 116 aa19.72■□□□□ 0.75
SPOP-220ENST00000515508 GOLGA8IPA6NC78 632 aa19.72■□□□□ 0.75
SPOP-220ENST00000515508 GOLGA8JA6NMD2 632 aa19.72■□□□□ 0.75
SPOP-220ENST00000515508 KIAA0391O15091 583 aaKnown RBP19.72■□□□□ 0.75
SPOP-220ENST00000515508 AXIN1O15169 862 aa19.72■□□□□ 0.75
SPOP-220ENST00000515508 HCRTO43612 131 aa19.72■□□□□ 0.75
SPOP-220ENST00000515508 CKMP06732 381 aa19.72■□□□□ 0.75
SPOP-220ENST00000515508 KRT19P08727 400 aa19.72■□□□□ 0.75
SPOP-220ENST00000515508 USP17L7P0C7H9 530 aa19.72■□□□□ 0.75
SPOP-220ENST00000515508 TMEM191BP0C7N4 346 aa19.72■□□□□ 0.75
SPOP-220ENST00000515508 CCDC192P0DO97 292 aa19.72■□□□□ 0.75
SPOP-220ENST00000515508 IDEP14735 1019 aa19.72■□□□□ 0.75
SPOP-220ENST00000515508 TCF3P15923 654 aa19.72■□□□□ 0.75
SPOP-220ENST00000515508 SF3A2Q15428 464 aaKnown RBP19.72■□□□□ 0.75
SPOP-220ENST00000515508 SOWAHAQ2M3V2 549 aa19.72■□□□□ 0.75
SPOP-220ENST00000515508 EML3Q32P44 896 aa19.72■□□□□ 0.75
SPOP-220ENST00000515508 PLA2G2CQ5R387 149 aa19.72■□□□□ 0.75
SPOP-220ENST00000515508 FAM171BQ6P995 826 aa19.72■□□□□ 0.75
SPOP-220ENST00000515508 SYT13Q7L8C5 426 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms