RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 MYRFLQ96LU7 910 aa13.64□□□□□ -0.23
CLCN3-210ENST00000515420 CEP63Q96MT8 703 aa13.64□□□□□ -0.23
CLCN3-210ENST00000515420 GCNAQ96QF7 691 aa13.64□□□□□ -0.23
CLCN3-210ENST00000515420 PRRX2Q99811 253 aa13.64□□□□□ -0.23
CLCN3-210ENST00000515420 BCO2Q9BYV7 579 aa13.64□□□□□ -0.23
CLCN3-210ENST00000515420 FAM124BQ9H5Z6 455 aaPredicted RBP13.64□□□□□ -0.23
CLCN3-210ENST00000515420 IL21Q9HBE4 155 aa13.64□□□□□ -0.23
CLCN3-210ENST00000515420 ZFP14Q9HCL3 533 aa13.64□□□□□ -0.23
CLCN3-210ENST00000515420 FBXL21Q9UKT6 434 aa13.64□□□□□ -0.23
CLCN3-210ENST00000515420 A8MXQ7 604 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 NRG2O14511 850 aaPredicted RBP13.63□□□□□ -0.23
CLCN3-210ENST00000515420 TRIM66O15016 1216 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 HCRTO43612 131 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 ATP2C2O75185 946 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 NOL4O94818 638 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 PDGFRBP09619 1106 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 HMGA1P17096 107 aaKnown RBP13.63□□□□□ -0.23
CLCN3-210ENST00000515420 PTPN1P18031 435 aaKnown RBP13.63□□□□□ -0.23
CLCN3-210ENST00000515420 TRIM21P19474 475 aaKnown RBP13.63□□□□□ -0.23
CLCN3-210ENST00000515420 BMP6P22004 513 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 CYP2F1P24903 491 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 DDX6P26196 483 aaKnown RBP eCLIP13.63□□□□□ -0.23
CLCN3-210ENST00000515420 ASPAP45381 313 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 GCLMP48507 274 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 MXI1P50539 228 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 NOP14P78316 857 aaKnown RBP13.63□□□□□ -0.23
CLCN3-210ENST00000515420 FAM78AQ5JUQ0 283 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 UNC93AQ86WB7 457 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 B3GALNT2Q8NCR0 500 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 FBXL13Q8NEE6 735 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 ZSCAN18Q8TBC5 510 aaPredicted RBP13.63□□□□□ -0.23
CLCN3-210ENST00000515420 GPR152Q8TDT2 470 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 DEPDC1BQ8WUY9 529 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 PCED1BQ96HM7 432 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 KXD1Q9BQD3 176 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 RPP25Q9BUL9 199 aaKnown RBP13.63□□□□□ -0.23
CLCN3-210ENST00000515420 ELOVL4Q9GZR5 314 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 ATXN3LQ9H3M9 355 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 SLITRK6Q9H5Y7 841 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 SMYD3Q9H7B4 428 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 CYP3A43Q9HB55 503 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 METTL14Q9HCE5 456 aaKnown RBP13.63□□□□□ -0.23
CLCN3-210ENST00000515420 OBP2AQ9NY56 170 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 KIAA1468Q9P260 1216 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 NME7Q9Y5B8 376 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 ZNF638Q14966 1978 aaKnown RBP13.63□□□□□ -0.23
CLCN3-210ENST00000515420 ATP8B3O60423 1300 aa13.63□□□□□ -0.23
CLCN3-210ENST00000515420 TRIM49BA6NDI0 452 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 PPP1R3GB7ZBB8 358 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 CLSTN1O94985 981 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 CFHP08603 1231 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 CD44P16070 742 aaKnown RBP13.62□□□□□ -0.23
CLCN3-210ENST00000515420 CLCN5P51795 746 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 NLRP12P59046 1061 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 INCA1Q0VD86 236 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 CCDC142Q17RM4 750 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 MDH1BQ5I0G3 518 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 TANGO2Q6ICL3 276 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 TTI2Q6NXR4 508 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 FILIP1Q7Z7B0 1213 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 SIX5Q8N196 739 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 TTC39CQ8N584 583 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 TAS1R2Q8TE23 839 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 GIPC2Q8TF65 315 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 DNASE1L2Q92874 299 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 C8orf48Q96LL4 319 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 ZSWIM3Q96MP5 696 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 NIF3L1Q9GZT8 377 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 MFSD1Q9H3U5 465 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 TASP1Q9H6P5 420 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 TRPV5Q9NQA5 729 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 EHD2Q9NZN4 543 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 ARMCX3Q9UH62 379 aaPredicted RBP13.62□□□□□ -0.23
CLCN3-210ENST00000515420 COQ4Q9Y3A0 265 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 ANAPC1Q9H1A4 1944 aa13.62□□□□□ -0.23
CLCN3-210ENST00000515420 KIF26AQ9ULI4 1882 aaPredicted RBP13.61□□□□□ -0.23
CLCN3-210ENST00000515420 SLC38A8A6NNN8 435 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 PMM2O15305 246 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 PDGFBP01127 241 aaPredicted RBP13.61□□□□□ -0.23
CLCN3-210ENST00000515420 F11P03951 625 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 GJA1P17302 382 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 PSMC3P17980 439 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 BDNFP23560 247 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 ANXA13P27216 316 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 GPR15P49685 360 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 CDH8P55286 799 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 GPC5P78333 572 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 CYP27A1Q02318 531 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 PRKCQQ04759 706 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 PAK1Q13153 545 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 DDR2Q16832 855 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 GPR158Q5T848 1215 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 ISM2Q6H9L7 571 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 ASTLQ6HA08 431 aaPredicted RBP13.61□□□□□ -0.23
CLCN3-210ENST00000515420 PHLDB3Q6NSJ2 640 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 SCARA5Q6ZMJ2 495 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 FRMD5Q7Z6J6 570 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 TMEM150AQ86TG1 271 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 MFSD6LQ8IWD5 586 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 SCN4BQ8IWT1 228 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms