RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 CLIC4Q9Y696 253 aa16.15■□□□□ 0.18
DDR1-278ENST00000515233 SPTBN2O15020 2390 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 ATG2BQ96BY7 2078 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 TM4SF5O14894 197 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 RNF40O75150 1001 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 TADA3O75528 432 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 EPN2O95208 641 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 EGFP01133 1207 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 ARSAP15289 507 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 GJA4P35212 333 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 LHX1P48742 406 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 PXNP49023 591 aaPredicted RBP16.14■□□□□ 0.17
DDR1-278ENST00000515233 ALCAMQ13740 583 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 PLA2G2CQ5R387 149 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 SDHAF4Q5VUM1 108 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 RRAGBQ5VZM2 374 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 SCARA3Q6AZY7 606 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 DPH6Q7L8W6 267 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 CSGALNACT2Q8N6G5 542 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 TOP6BLQ8N6T0 577 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 ZSWIM2Q8NEG5 633 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 FUBP3Q96I24 572 aaKnown RBP eCLIP16.14■□□□□ 0.17
DDR1-278ENST00000515233 P2RY13Q9BPV8 354 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 TMEM206Q9H813 350 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 ECT2Q9H8V3 914 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 RBAKQ9NYW8 714 aaPredicted RBP16.14■□□□□ 0.17
DDR1-278ENST00000515233 PCDHGA5Q9Y5G8 931 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 SPAG17Q6Q759 2223 aa16.14■□□□□ 0.17
DDR1-278ENST00000515233 EML5Q05BV3 1969 aa16.13■□□□□ 0.17
DDR1-278ENST00000515233 FRMD3A2A2Y4 597 aa16.13■□□□□ 0.17
DDR1-278ENST00000515233 GCNT3O95395 438 aa16.13■□□□□ 0.17
DDR1-278ENST00000515233 USP17L7P0C7H9 530 aa16.13■□□□□ 0.17
DDR1-278ENST00000515233 CCDC192P0DO97 292 aa16.13■□□□□ 0.17
DDR1-278ENST00000515233 ACAT1P24752 427 aaKnown RBP16.13■□□□□ 0.17
DDR1-278ENST00000515233 CASP5P51878 434 aa16.13■□□□□ 0.17
DDR1-278ENST00000515233 RBP5P82980 135 aa16.13■□□□□ 0.17
DDR1-278ENST00000515233 MTF1Q14872 753 aa16.13■□□□□ 0.17
DDR1-278ENST00000515233 ZNF77Q15935 545 aa16.13■□□□□ 0.17
DDR1-278ENST00000515233 AASDHQ4L235 1098 aaPredicted RBP16.13■□□□□ 0.17
DDR1-278ENST00000515233 FAM171BQ6P995 826 aa16.13■□□□□ 0.17
DDR1-278ENST00000515233 SYT13Q7L8C5 426 aa16.13■□□□□ 0.17
DDR1-278ENST00000515233 KBTBD6Q86V97 674 aa16.13■□□□□ 0.17
DDR1-278ENST00000515233 C12orf50Q8NA57 414 aaPredicted RBP16.13■□□□□ 0.17
DDR1-278ENST00000515233 STKLD1Q8NE28 680 aa16.13■□□□□ 0.17
DDR1-278ENST00000515233 OSCP1Q8WVF1 389 aa16.13■□□□□ 0.17
DDR1-278ENST00000515233 CYP2S1Q96SQ9 504 aa16.13■□□□□ 0.17
DDR1-278ENST00000515233 UPF2Q9HAU5 1272 aaKnown RBP16.13■□□□□ 0.17
DDR1-278ENST00000515233 TBC1D7Q9P0N9 293 aa16.13■□□□□ 0.17
DDR1-278ENST00000515233 SNX9Q9Y5X1 595 aa16.13■□□□□ 0.17
DDR1-278ENST00000515233 KMT2BQ9UMN6 2715 aaPredicted RBP16.13■□□□□ 0.17
DDR1-278ENST00000515233 TPRP12270 2363 aaKnown RBP16.12■□□□□ 0.17
DDR1-278ENST00000515233 ANAPC1Q9H1A4 1944 aa16.12■□□□□ 0.17
DDR1-278ENST00000515233 KIAA0391O15091 583 aaKnown RBP16.12■□□□□ 0.17
DDR1-278ENST00000515233 TCF3P15923 654 aa16.12■□□□□ 0.17
DDR1-278ENST00000515233 PDCP20941 246 aa16.12■□□□□ 0.17
DDR1-278ENST00000515233 PCSK1P29120 753 aa16.12■□□□□ 0.17
DDR1-278ENST00000515233 TXLNAP40222 546 aa16.12■□□□□ 0.17
DDR1-278ENST00000515233 CUL4AQ13619 759 aa16.12■□□□□ 0.17
DDR1-278ENST00000515233 SF3A2Q15428 464 aaKnown RBP16.12■□□□□ 0.17
DDR1-278ENST00000515233 SOWAHAQ2M3V2 549 aa16.12■□□□□ 0.17
DDR1-278ENST00000515233 IL31Q6EBC2 164 aa16.12■□□□□ 0.17
DDR1-278ENST00000515233 CCDC73Q6ZRK6 1079 aa16.12■□□□□ 0.17
DDR1-278ENST00000515233 LIMS2Q7Z4I7 341 aa16.12■□□□□ 0.17
DDR1-278ENST00000515233 OSTM1Q86WC4 334 aa16.12■□□□□ 0.17
DDR1-278ENST00000515233 SPATA2LQ8IUW3 424 aaPredicted RBP16.12■□□□□ 0.17
DDR1-278ENST00000515233 SYCP3Q8IZU3 236 aa16.12■□□□□ 0.17
DDR1-278ENST00000515233 CPA6Q8N4T0 437 aa16.12■□□□□ 0.17
DDR1-278ENST00000515233 FSIP1Q8NA03 581 aa16.12■□□□□ 0.17
DDR1-278ENST00000515233 CEP295NLQ96MC4 621 aa16.12■□□□□ 0.17
DDR1-278ENST00000515233 CLIC6Q96NY7 704 aa16.12■□□□□ 0.17
DDR1-278ENST00000515233 SLC22A12Q96S37 553 aa16.12■□□□□ 0.17
DDR1-278ENST00000515233 PDE11AQ9HCR9 933 aa16.12■□□□□ 0.17
DDR1-278ENST00000515233 DUS2Q9NX74 493 aaKnown RBP16.12■□□□□ 0.17
DDR1-278ENST00000515233 GCNT4Q9P109 453 aa16.12■□□□□ 0.17
DDR1-278ENST00000515233 EBF1Q9UH73 591 aa16.12■□□□□ 0.17
DDR1-278ENST00000515233 SIX4Q9UIU6 781 aa16.12■□□□□ 0.17
DDR1-278ENST00000515233 MORC2Q9Y6X9 1032 aaPredicted RBP16.12■□□□□ 0.17
DDR1-278ENST00000515233 TRAV19A0A0A6YYK7 116 aa16.11■□□□□ 0.17
DDR1-278ENST00000515233 GOLGA8IPA6NC78 632 aa16.11■□□□□ 0.17
DDR1-278ENST00000515233 GOLGA8JA6NMD2 632 aa16.11■□□□□ 0.17
DDR1-278ENST00000515233 KRT37O76014 449 aa16.11■□□□□ 0.17
DDR1-278ENST00000515233 KRT19P08727 400 aa16.11■□□□□ 0.17
DDR1-278ENST00000515233 IDEP14735 1019 aa16.11■□□□□ 0.17
DDR1-278ENST00000515233 MAGEA11P43364 429 aa16.11■□□□□ 0.17
DDR1-278ENST00000515233 USP4Q13107 963 aa16.11■□□□□ 0.17
DDR1-278ENST00000515233 EML3Q32P44 896 aa16.11■□□□□ 0.17
DDR1-278ENST00000515233 PLK5Q496M5 336 aa16.11■□□□□ 0.17
DDR1-278ENST00000515233 ADGRF2Q8IZF7 708 aa16.11■□□□□ 0.17
DDR1-278ENST00000515233 EZH1Q92800 747 aaPredicted RBP16.11■□□□□ 0.17
DDR1-278ENST00000515233 CD101Q93033 1021 aa16.11■□□□□ 0.17
DDR1-278ENST00000515233 ATP2A3Q93084 1043 aa16.11■□□□□ 0.17
DDR1-278ENST00000515233 CBWD1Q9BRT8 395 aa16.11■□□□□ 0.17
DDR1-278ENST00000515233 DUSP15Q9H1R2 295 aaPredicted RBP16.11■□□□□ 0.17
DDR1-278ENST00000515233 RXFP3Q9NSD7 469 aa16.11■□□□□ 0.17
DDR1-278ENST00000515233 CACNA1BQ00975 2339 aa16.1■□□□□ 0.17
DDR1-278ENST00000515233 VPS37CA5D8V6 355 aaPredicted RBP16.1■□□□□ 0.17
DDR1-278ENST00000515233 CKMP06732 381 aa16.1■□□□□ 0.17
DDR1-278ENST00000515233 TMEM191BP0C7N4 346 aa16.1■□□□□ 0.17
DDR1-278ENST00000515233 PFKLP17858 780 aa16.1■□□□□ 0.17
DDR1-278ENST00000515233 IFNAR2P48551 515 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms