RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 C4orf50Q6ZRC1 276 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 LRRTM3Q86VH5 581 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 SLC47A2Q86VL8 602 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 SPPL2BQ8TCT7 592 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 ZNF606Q8WXB4 792 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 PCED1BQ96HM7 432 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 CEP295NLQ96MC4 621 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 HEXIM2Q96MH2 286 aaKnown RBP12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 KLHL5Q96PQ7 755 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 ENTPD7Q9NQZ7 604 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 ZNHIT6Q9NWK9 470 aaKnown RBP12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 AFF4Q9UHB7 1163 aaKnown RBP12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 CDY1Q9Y6F8 540 aa12.72□□□□□ -0.37
PDLIM5-220ENST00000514830 ATP8B3O60423 1300 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 WDR27A2RRH5 827 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 ATP2C2O75185 946 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 ATF2P15336 505 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 CDH5P33151 784 aaPredicted RBP12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 OR1D2P34982 312 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 ADKP55263 362 aaKnown RBP12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 PSMC1P62191 440 aaKnown RBP12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 CDR2Q01850 454 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 KLHL30Q0D2K2 578 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 PKDCCQ504Y2 493 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 PPP1R26Q5T8A7 1209 aaPredicted RBP12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 VSTM1Q6UX27 236 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 TRIM72Q6ZMU5 477 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 PAQR9Q6ZVX9 377 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 NOP9Q86U38 636 aaKnown RBP12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 FUKQ8N0W3 1084 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 C12orf29Q8N999 325 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 ANKRD52Q8NB46 1076 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 OLIG1Q8TAK6 271 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 HDAC7Q8WUI4 952 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 TFAP2BQ92481 460 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 CYFIP2Q96F07 1278 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 TMEM209Q96SK2 561 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 CDCA3Q99618 268 aaPredicted RBP12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 ZSWIM1Q9BR11 485 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 B3GNT5Q9BYG0 378 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 UBXN6Q9BZV1 441 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 ZNF518BQ9C0D4 1074 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 LHX5Q9H2C1 402 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 TTYH1Q9H313 450 aaPredicted RBP12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 CSNK1G1Q9HCP0 422 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 TMLHEQ9NVH6 421 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 GTF3C4Q9UKN8 822 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 PCDHB5Q9Y5E4 795 aa12.71□□□□□ -0.37
PDLIM5-220ENST00000514830 MYO7AQ13402 2215 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 NCOR1O75376 2440 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 MTMR11A4FU01 709 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 HIDE1A8MVS5 230 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 C2CD2LO14523 706 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 ADAM12O43184 909 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 THAP12O43422 761 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 PAPLNO95428 1278 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 VNN2O95498 520 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 LSM8O95777 96 aaKnown RBP12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 SETSIPP0DME0 302 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 CPB1P15086 417 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 CD19P15391 556 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 IRS1P35568 1242 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 SLC39A12Q504Y0 691 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 MDH1BQ5I0G3 518 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 PPP1R2P3Q6NXS1 205 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 FAM35AQ86V20 835 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 TCEAL8Q8IYN2 117 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 SPC24Q8NBT2 197 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 GDPD5Q8WTR4 605 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 STK32AQ8WU08 396 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 ATXN2LQ8WWM7 1075 aaKnown RBP12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 AUTS2Q8WXX7 1259 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 MYLPFQ96A32 169 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 SMARCD1Q96GM5 515 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 DUSP16Q9BY84 665 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 HAUS4Q9H6D7 363 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 CERS4Q9HA82 394 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 PNPLA8Q9NP80 782 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 ACP6Q9NPH0 428 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 CYLDQ9NQC7 956 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 ARHGAP20Q9P2F6 1191 aa12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 ZNF638Q14966 1978 aaKnown RBP12.7□□□□□ -0.38
PDLIM5-220ENST00000514830 CYP1A1P04798 512 aaPredicted RBP12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 OR4Q2P0C623 313 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 GZMAP12544 262 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 CHRNB2P17787 502 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 RPL17P18621 184 aaKnown RBP12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 BRD2P25440 801 aaKnown RBP12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 RPL34P49207 117 aaKnown RBP12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 CLCN4P51793 760 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 BCAT1P54687 386 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 FMO1Q01740 532 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 ARID5AQ03989 594 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 BST2Q10589 180 aaKnown RBP12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 ORC1Q13415 861 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 ASTE1Q2TB18 679 aaPredicted RBP12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 PLPP4Q5VZY2 271 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 CYP26C1Q6V0L0 522 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms