RNA–Protein interactions for RNA: ENST00000514588.1

CCND3-221, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-221ENST00000514588 ARHGAP8P85298 464 aa25.83■■□□□ 1.73
CCND3-221ENST00000514588 RUNX3Q13761 415 aa25.83■■□□□ 1.73
CCND3-221ENST00000514588 SIM2Q14190 667 aaPredicted RBP25.83■■□□□ 1.73
CCND3-221ENST00000514588 STK38Q15208 465 aa25.83■■□□□ 1.73
CCND3-221ENST00000514588 SOWAHAQ2M3V2 549 aa25.83■■□□□ 1.73
CCND3-221ENST00000514588 HEATR6Q6AI08 1181 aaKnown RBP25.83■■□□□ 1.73
CCND3-221ENST00000514588 TRIM68Q6AZZ1 485 aa25.83■■□□□ 1.73
CCND3-221ENST00000514588 LONP2Q86WA8 852 aa25.83■■□□□ 1.73
CCND3-221ENST00000514588 OR5B17Q8NGF7 314 aa25.83■■□□□ 1.73
CCND3-221ENST00000514588 CHFRQ96EP1 664 aa25.83■■□□□ 1.73
CCND3-221ENST00000514588 TRMT2BQ96GJ1 504 aaKnown RBP25.83■■□□□ 1.73
CCND3-221ENST00000514588 TNMDQ9H2S6 317 aa25.83■■□□□ 1.73
CCND3-221ENST00000514588 EBF3Q9H4W6 596 aa25.83■■□□□ 1.73
CCND3-221ENST00000514588 RETP07949 1114 aa25.82■■□□□ 1.72
CCND3-221ENST00000514588 SDHBP21912 280 aa25.82■■□□□ 1.72
CCND3-221ENST00000514588 PCSK1P29120 753 aa25.82■■□□□ 1.72
CCND3-221ENST00000514588 HOXA6P31267 233 aa25.82■■□□□ 1.72
CCND3-221ENST00000514588 HOXD13P35453 343 aa25.82■■□□□ 1.72
CCND3-221ENST00000514588 LHX1P48742 406 aa25.82■■□□□ 1.72
CCND3-221ENST00000514588 SPEM2Q0P670 501 aa25.82■■□□□ 1.72
CCND3-221ENST00000514588 E2F4Q16254 413 aa25.82■■□□□ 1.72
CCND3-221ENST00000514588 CFAP221Q4G0U5 840 aa25.82■■□□□ 1.72
CCND3-221ENST00000514588 CBWD2Q8IUF1 395 aa25.82■■□□□ 1.72
CCND3-221ENST00000514588 ANKRD36BP1Q96IX9 119 aa25.82■■□□□ 1.72
CCND3-221ENST00000514588 MYRFLQ96LU7 910 aa25.82■■□□□ 1.72
CCND3-221ENST00000514588 KBTBD4Q9NVX7 518 aa25.82■■□□□ 1.72
CCND3-221ENST00000514588 UXTQ9UBK9 157 aaPredicted RBP25.82■■□□□ 1.72
CCND3-221ENST00000514588 OBSL1O75147 1896 aa25.81■■□□□ 1.72
CCND3-221ENST00000514588 ZNF233A6NK53 670 aa25.81■■□□□ 1.72
CCND3-221ENST00000514588 CNR2P34972 360 aa25.81■■□□□ 1.72
CCND3-221ENST00000514588 ATXN1P54253 815 aaKnown RBP25.81■■□□□ 1.72
CCND3-221ENST00000514588 MYO1EQ12965 1108 aa25.81■■□□□ 1.72
CCND3-221ENST00000514588 ZNF268Q14587 947 aaPredicted RBP25.81■■□□□ 1.72
CCND3-221ENST00000514588 TMEM196Q5HYL7 178 aa25.81■■□□□ 1.72
CCND3-221ENST00000514588 FSTL4Q6MZW2 842 aa25.81■■□□□ 1.72
CCND3-221ENST00000514588 STXBP4Q6ZWJ1 553 aa25.81■■□□□ 1.72
CCND3-221ENST00000514588 LIMS2Q7Z4I7 341 aa25.81■■□□□ 1.72
CCND3-221ENST00000514588 SPATA2LQ8IUW3 424 aaPredicted RBP25.81■■□□□ 1.72
CCND3-221ENST00000514588 HPDLQ96IR7 371 aa25.81■■□□□ 1.72
CCND3-221ENST00000514588 K7ELQ4 463 aaPredicted RBP25.8■■□□□ 1.72
CCND3-221ENST00000514588 SPTLC2O15270 562 aa25.8■■□□□ 1.72
CCND3-221ENST00000514588 ATP2C2O75185 946 aa25.8■■□□□ 1.72
CCND3-221ENST00000514588 ARSAP15289 507 aa25.8■■□□□ 1.72
CCND3-221ENST00000514588 PKN3Q6P5Z2 889 aa25.8■■□□□ 1.72
CCND3-221ENST00000514588 FAM171BQ6P995 826 aa25.8■■□□□ 1.72
CCND3-221ENST00000514588 DPH6Q7L8W6 267 aa25.8■■□□□ 1.72
CCND3-221ENST00000514588 KBTBD7Q8WVZ9 684 aa25.8■■□□□ 1.72
CCND3-221ENST00000514588 FUBP3Q96I24 572 aaKnown RBP eCLIP25.8■■□□□ 1.72
CCND3-221ENST00000514588 TRIM9Q9C026 710 aa25.8■■□□□ 1.72
CCND3-221ENST00000514588 LRRC27Q9C0I9 530 aa25.8■■□□□ 1.72
CCND3-221ENST00000514588 HSPBP1Q9NZL4 362 aa25.8■■□□□ 1.72
CCND3-221ENST00000514588 TFIP11Q9UBB9 837 aaKnown RBP25.8■■□□□ 1.72
CCND3-221ENST00000514588 CDV3Q9UKY7 258 aaKnown RBP25.8■■□□□ 1.72
CCND3-221ENST00000514588 TRDMT1O14717 391 aaKnown RBP25.79■■□□□ 1.72
CCND3-221ENST00000514588 PPP6R2O75170 966 aa25.79■■□□□ 1.72
CCND3-221ENST00000514588 TNNC2P02585 160 aa25.79■■□□□ 1.72
CCND3-221ENST00000514588 GRSF1Q12849 480 aaKnown RBP eCLIP25.79■■□□□ 1.72
CCND3-221ENST00000514588 SURF1Q15526 300 aa25.79■■□□□ 1.72
CCND3-221ENST00000514588 DUOXA2Q1HG44 320 aa25.79■■□□□ 1.72
CCND3-221ENST00000514588 CC2D1AQ6P1N0 951 aaPredicted RBP25.79■■□□□ 1.72
CCND3-221ENST00000514588 SCN4BQ8IWT1 228 aa25.79■■□□□ 1.72
CCND3-221ENST00000514588 SLC22A12Q96S37 553 aa25.79■■□□□ 1.72
CCND3-221ENST00000514588 CUEDC2Q9H467 287 aa25.79■■□□□ 1.72
CCND3-221ENST00000514588 R3HCC1Q9Y3T6 440 aaKnown RBP25.79■■□□□ 1.72
CCND3-221ENST00000514588 SPTBN2O15020 2390 aa25.78■■□□□ 1.72
CCND3-221ENST00000514588 LRP3O75074 770 aa25.78■■□□□ 1.72
CCND3-221ENST00000514588 LMO2P25791 158 aa25.78■■□□□ 1.72
CCND3-221ENST00000514588 MAGEA11P43364 429 aa25.78■■□□□ 1.72
CCND3-221ENST00000514588 PDGFRLQ15198 375 aa25.78■■□□□ 1.72
CCND3-221ENST00000514588 EPM2AIP1Q7L775 607 aaPredicted RBP25.78■■□□□ 1.72
CCND3-221ENST00000514588 WDR5BQ86VZ2 330 aa25.78■■□□□ 1.72
CCND3-221ENST00000514588 DHX58Q96C10 678 aa25.78■■□□□ 1.72
CCND3-221ENST00000514588 CYP2S1Q96SQ9 504 aa25.78■■□□□ 1.72
CCND3-221ENST00000514588 SYT15Q9BQS2 421 aa25.78■■□□□ 1.72
CCND3-221ENST00000514588 FBRSL1Q9HCM7 1045 aaKnown RBP25.78■■□□□ 1.72
CCND3-221ENST00000514588 TRPC7Q9HCX4 862 aa25.78■■□□□ 1.72
CCND3-221ENST00000514588 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.78■■□□□ 1.72
CCND3-221ENST00000514588 EIF3DO15371 548 aaKnown RBP eCLIP25.77■■□□□ 1.72
CCND3-221ENST00000514588 PSMC1P62191 440 aaKnown RBP25.77■■□□□ 1.72
CCND3-221ENST00000514588 ASIC1P78348 528 aa25.77■■□□□ 1.72
CCND3-221ENST00000514588 FAM160A1Q05DH4 1040 aa25.77■■□□□ 1.72
CCND3-221ENST00000514588 MTF1Q14872 753 aa25.77■■□□□ 1.72
CCND3-221ENST00000514588 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.77■■□□□ 1.72
CCND3-221ENST00000514588 WDR49Q8IV35 697 aa25.77■■□□□ 1.72
CCND3-221ENST00000514588 ZNF507Q8TCN5 953 aa25.77■■□□□ 1.72
CCND3-221ENST00000514588 BACH2Q9BYV9 841 aa25.77■■□□□ 1.72
CCND3-221ENST00000514588 KIAA1586Q9HCI6 787 aa25.77■■□□□ 1.72
CCND3-221ENST00000514588 CRTAC1Q9NQ79 661 aa25.77■■□□□ 1.72
CCND3-221ENST00000514588 CDH9Q9ULB4 789 aa25.77■■□□□ 1.72
CCND3-221ENST00000514588 ZNF638Q14966 1978 aaKnown RBP25.76■■□□□ 1.72
CCND3-221ENST00000514588 TRAV19A0A0A6YYK7 116 aa25.76■■□□□ 1.71
CCND3-221ENST00000514588 USP17L7P0C7H9 530 aa25.76■■□□□ 1.71
CCND3-221ENST00000514588 AMPD3Q01432 767 aa25.76■■□□□ 1.71
CCND3-221ENST00000514588 AMPD2Q01433 879 aa25.76■■□□□ 1.71
CCND3-221ENST00000514588 ZNF77Q15935 545 aa25.76■■□□□ 1.71
CCND3-221ENST00000514588 NAIF1Q69YI7 327 aaPredicted RBP25.76■■□□□ 1.71
CCND3-221ENST00000514588 CNNM4Q6P4Q7 775 aa25.76■■□□□ 1.71
CCND3-221ENST00000514588 SHC4Q6S5L8 630 aa25.76■■□□□ 1.71
CCND3-221ENST00000514588 C4orf50Q6ZRC1 276 aa25.76■■□□□ 1.71
CCND3-221ENST00000514588 CEP68Q76N32 757 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms