RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 CMTM8Q8IZV2 173 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 PLEKHO2Q8TD55 490 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 ZNF516Q92618 1163 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 MYLPFQ96A32 169 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 CCDC127Q96BQ5 260 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 MYRFLQ96LU7 910 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 SLC46A2Q9BY10 475 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 KCTD10Q9H3F6 313 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 CRTAC1Q9NQ79 661 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 PRMT8Q9NR22 394 aaPredicted RBP11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 DMAC2Q9NW81 257 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 SPATA6Q9NWH7 488 aaPredicted RBP11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 FBXO4Q9UKT5 387 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 CDH9Q9ULB4 789 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 OBSL1O75147 1896 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 A0A1W2PQ27 194 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 A0A1W2PQ64 194 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 A0A1W2PQD8 194 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 SLC38A8A6NNN8 435 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 LRRIQ3A6PVS8 624 aaPredicted RBP11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 SOBPA7XYQ1 873 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 LAMTOR5O43504 91 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 ATP2C2O75185 946 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 CST3P01034 146 aaPredicted RBP11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 RPN1P04843 607 aaKnown RBP11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 SYKP43405 635 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 NDUFA8P51970 172 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 CLDN10P78369 228 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 MAPRE1Q15691 268 aaKnown RBP11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 DDR2Q16832 855 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 C1orf228Q6PIY5 440 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 ZC3H14Q6PJT7 736 aaKnown RBP11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 C4orf50Q6ZRC1 276 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 BPIFB1Q8TDL5 484 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 CSGALNACT1Q8TDX6 532 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 FAM3CQ92520 227 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 MMS19Q96T76 1030 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 MRPL45Q9BRJ2 306 aaKnown RBP11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 IER2Q9BTL4 223 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 SCAND2PQ9GZW5 306 aaPredicted RBP11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 SMG9Q9H0W8 520 aaKnown RBP11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 XYLT2Q9H1B5 865 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 CHRDQ9H2X0 955 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 SEMA4AQ9H3S1 761 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 GOLPH3LQ9H4A5 285 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 C8orf33Q9H7E9 229 aaPredicted RBP11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 VRTNQ9H8Y1 702 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 KIF9Q9HAQ2 790 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 UXTQ9UBK9 157 aaPredicted RBP11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 NDRG2Q9UN36 371 aaKnown RBP11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 NME7Q9Y5B8 376 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 ATP6V1DQ9Y5K8 247 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 R4GN57 208 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 WDR87Q6ZQQ6 2873 aa11.19□□□□□ -0.62
HMGXB3-205ENST00000514469 PDXKO00764 312 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 RHOBTB3O94955 611 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 FAM163BP0C2L3 166 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 PRR29P0C7W0 189 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 CCNE1P24864 410 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 ATICP31939 592 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 AVPR1AP37288 418 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 CASP4P49662 377 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 MYL6P60660 151 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 TNNC1P63316 161 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 PLCB2Q00722 1185 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 DPYDQ12882 1025 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 ZNF268Q14587 947 aaPredicted RBP11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 WDR72Q3MJ13 1102 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 TDRD10Q5VZ19 366 aaKnown RBP11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 TXNDC8Q6A555 127 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 VSTM1Q6UX27 236 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 GPIHBP1Q8IV16 184 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 CELF5Q8N6W0 485 aaKnown RBP11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 MAB21L3Q8N8X9 362 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 MYCBPAPQ8TBZ2 947 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 PARD3BQ8TEW8 1205 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 MRPS31Q92665 395 aaKnown RBP11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 NELL1Q92832 810 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 USP13Q92995 863 aaPredicted RBP11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 SYAP1Q96A49 352 aaPredicted RBP11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 ZFYVE19Q96K21 471 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 SPATA17Q96L03 361 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 CEP295NLQ96MC4 621 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 MAGED2Q9UNF1 606 aaPredicted RBP11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 CCL26Q9Y258 94 aa11.18□□□□□ -0.62
HMGXB3-205ENST00000514469 SPECC1L-ADORA2AF8WAN1 911 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 LMNAP02545 664 aaKnown RBP11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 NR3C1P04150 777 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 PDGFRBP09619 1106 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 CHRNB1P11230 501 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 TDGF1P13385 188 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 BDNFP23560 247 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 CTHP32929 405 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 GNL1P36915 607 aaPredicted RBP11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 SOX9P48436 509 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 KPNA1P52294 538 aaPredicted RBP11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 AP3M2P53677 418 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 MTAPQ13126 283 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 TRPC3Q13507 836 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 MDH1BQ5I0G3 518 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms