RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 TRIM66O15016 1216 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 HMGCRP04035 888 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 GRM5P41594 1212 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 GPD2P43304 727 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 GABRB2P47870 512 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 CDR1P51861 262 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 NDST1P52848 882 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 VCPP55072 806 aaKnown RBP8.63□□□□□ -1.03
CPNE4-211ENST00000514439 RBP5P82980 135 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 TMEM62Q0P6H9 643 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 INCA1Q0VD86 236 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 ZNF268Q14587 947 aaPredicted RBP8.63□□□□□ -1.03
CPNE4-211ENST00000514439 CNGA2Q16280 664 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 KYNUQ16719 465 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 FAM110CQ1W6H9 321 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 KCNT1Q5JUK3 1230 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 HIBCHQ6NVY1 386 aaPredicted RBP8.63□□□□□ -1.03
CPNE4-211ENST00000514439 DPH6Q7L8W6 267 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 PLEKHH3Q7Z736 793 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 NT5DC4Q86YG4 428 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 REM2Q8IYK8 340 aaPredicted RBP8.63□□□□□ -1.03
CPNE4-211ENST00000514439 ALLCQ8N6M5 410 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 NPLOC4Q8TAT6 608 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 MCRS1Q96EZ8 462 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 PARK7Q99497 189 aaKnown RBP8.63□□□□□ -1.03
CPNE4-211ENST00000514439 PTPN18Q99952 460 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 ROPN1BQ9BZX4 212 aaPredicted RBP8.63□□□□□ -1.03
CPNE4-211ENST00000514439 FAM49AQ9H0Q0 323 aaPredicted RBP8.63□□□□□ -1.03
CPNE4-211ENST00000514439 ADAM7Q9H2U9 754 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 ROPN1Q9HAT0 212 aaPredicted RBP8.63□□□□□ -1.03
CPNE4-211ENST00000514439 GBA2Q9HCG7 927 aaPredicted RBP8.63□□□□□ -1.03
CPNE4-211ENST00000514439 NINJ2Q9NZG7 142 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 GINS2Q9Y248 185 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 FAM169AQ9Y6X4 670 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 NPTXRO95502 500 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 STAU1O95793 577 aaKnown RBP8.63□□□□□ -1.03
CPNE4-211ENST00000514439 KRT7P08729 469 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 ZSCAN5DPP0CG00 497 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 VDRP11473 427 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 ETS1P14921 441 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 CHN1P15882 459 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 CYP3A5P20815 502 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 ARSEP51690 589 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 CORO7P57737 925 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 OASLQ15646 514 aaKnown RBP8.63□□□□□ -1.03
CPNE4-211ENST00000514439 HADHQ16836 314 aaKnown RBP8.63□□□□□ -1.03
CPNE4-211ENST00000514439 DCAF4L1Q3SXM0 396 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 IQSEC1Q6DN90 963 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 B4GALNT4Q76KP1 1039 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 UBA3Q8TBC4 463 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 CCHCR1Q8TD31 782 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 PPP1R13LQ8WUF5 828 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 NKD2Q969F2 451 aaPredicted RBP8.63□□□□□ -1.03
CPNE4-211ENST00000514439 STMN4Q9H169 189 aaPredicted RBP8.63□□□□□ -1.03
CPNE4-211ENST00000514439 CXCL16Q9H2A7 254 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 ADAMTS10Q9H324 1103 aa8.63□□□□□ -1.03
CPNE4-211ENST00000514439 DNALI1O14645 258 aaPredicted RBP8.62□□□□□ -1.03
CPNE4-211ENST00000514439 HOXA11P31270 313 aaPredicted RBP8.62□□□□□ -1.03
CPNE4-211ENST00000514439 PSMC4P43686 418 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 DYNLT1P63172 113 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 FKBP1BP68106 108 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 CCDC38Q502W7 563 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 ERMARDQ5T6L9 678 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 FAM102AQ5T9C2 384 aaPredicted RBP8.62□□□□□ -1.03
CPNE4-211ENST00000514439 SPRYD7Q5W111 196 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 C10orf67Q8IYJ2 551 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 ZCCHC9Q8N567 271 aaKnown RBP8.62□□□□□ -1.03
CPNE4-211ENST00000514439 IPO4Q8TEX9 1081 aaKnown RBP8.62□□□□□ -1.03
CPNE4-211ENST00000514439 CENPTQ96BT3 561 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 SERPINB12Q96P63 405 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 XPO6Q96QU8 1125 aaKnown RBP8.62□□□□□ -1.03
CPNE4-211ENST00000514439 TMEM121Q9BTD3 319 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 NT5C1AQ9BXI3 368 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 EIF2AQ9BY44 585 aaKnown RBP8.62□□□□□ -1.03
CPNE4-211ENST00000514439 TSPAN16Q9UKR8 245 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 DRG1Q9Y295 367 aaKnown RBP8.62□□□□□ -1.03
CPNE4-211ENST00000514439 RRN3P2A6NIE6 340 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 PPEF2O14830 753 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 ECM2O94769 699 aaPredicted RBP8.62□□□□□ -1.03
CPNE4-211ENST00000514439 ITGAVP06756 1048 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 CD48P09326 243 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 SMIM10L2AP0DMW4 78 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 SMIM10L2BP0DMW5 78 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 KDELR1P24390 212 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 MIPP30301 263 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 PLCB3Q01970 1234 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 MYO1EQ12965 1108 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 GPS1Q13098 491 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 GPR162Q16538 588 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 QPCTQ16769 361 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 LCLAT1Q6UWP7 414 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 CATSPER4Q7RTX7 472 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 RELL1Q8IUW5 271 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 SLC35B2Q8TB61 432 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 ATXN2LQ8WWM7 1075 aaKnown RBP8.62□□□□□ -1.03
CPNE4-211ENST00000514439 SNX27Q96L92 541 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 C9orf72Q96LT7 481 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 ZMAT2Q96NC0 199 aaKnown RBP8.62□□□□□ -1.03
CPNE4-211ENST00000514439 RBM15Q96T37 977 aaKnown RBP eCLIP8.62□□□□□ -1.03
CPNE4-211ENST00000514439 FOXP3Q9BZS1 431 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms