RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	LRRC3C	A6NJW4	275 aa		5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	PPM1D	O15297	605 aa		5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	CTNND1	O60716	968 aa	Known RBP	5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	NDUFB7	P17568	137 aa		5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	DRD4	P21917	467 aa		5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	PCSK6	P29122	969 aa		5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	SLC11A2	P49281	568 aa		5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	LILRA4	P59901	499 aa		5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	PPP2R5A	Q15172	486 aa		5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	SUMO4	Q6EEV6	95 aa		5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	CEP85	Q6P2H3	762 aa		5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	ZNF788	Q6ZQV5	615 aa		5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	MAEA	Q7L5Y9	396 aa		5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	GAS2L3	Q86XJ1	694 aa		5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	CHPF	Q8IZ52	775 aa		5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	ZBTB34	Q8NCN2	500 aa		5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	OR6B3	Q8NGW1	331 aa		5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	HASPIN	Q8TF76	798 aa		5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	SUCLG2	Q96I99	432 aa		5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	LRGUK	Q96M69	825 aa		5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	MESP1	Q9BRJ9	268 aa		5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	SERHL	Q9NQF3	203 aa		5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	CPA4	Q9UI42	421 aa		5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	5.23	□□□□□ -1.57
MATR3-223	ENST00000514402	LOC105371045	A0A1W2PR82	267 aa		5.22	□□□□□ -1.57
MATR3-223	ENST00000514402	CAPN8	A6NHC0	703 aa		5.22	□□□□□ -1.57
MATR3-223	ENST00000514402	FRS3	O43559	492 aa		5.22	□□□□□ -1.57
MATR3-223	ENST00000514402	NPR1	P16066	1061 aa		5.22	□□□□□ -1.57
MATR3-223	ENST00000514402	EN2	P19622	333 aa	Predicted RBP	5.22	□□□□□ -1.57
MATR3-223	ENST00000514402	UCP3	P55916	312 aa		5.22	□□□□□ -1.57
MATR3-223	ENST00000514402	MGAT5B	Q3V5L5	792 aa		5.22	□□□□□ -1.57
MATR3-223	ENST00000514402	AARS2	Q5JTZ9	985 aa	Known RBP	5.22	□□□□□ -1.57
MATR3-223	ENST00000514402	KIAA1614	Q5VZ46	1190 aa		5.22	□□□□□ -1.57
MATR3-223	ENST00000514402	FCRLB	Q6BAA4	426 aa		5.22	□□□□□ -1.57
MATR3-223	ENST00000514402	NPNT	Q6UXI9	565 aa		5.22	□□□□□ -1.57
MATR3-223	ENST00000514402	OVCH2	Q7RTZ1	564 aa		5.22	□□□□□ -1.57
MATR3-223	ENST00000514402	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	5.22	□□□□□ -1.57
MATR3-223	ENST00000514402	MAGEB6	Q8N7X4	407 aa		5.22	□□□□□ -1.57
MATR3-223	ENST00000514402	NDRG4	Q9ULP0	352 aa	Known RBP	5.22	□□□□□ -1.57
MATR3-223	ENST00000514402	FRMD4B	Q9Y2L6	1034 aa		5.22	□□□□□ -1.57
MATR3-223	ENST00000514402	FAM163B	P0C2L3	166 aa		5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	EBLN1	P0CF75	366 aa		5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	ZNF37A	P17032	561 aa	Predicted RBP	5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	PDE6C	P51160	858 aa		5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	ATXN1	P54253	815 aa	Known RBP	5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	PROK1	P58294	105 aa		5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	RAB32	Q13637	225 aa		5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	SLC44A4	Q53GD3	710 aa		5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	ARHGAP40	Q5TG30	622 aa		5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	MTHFD1L	Q6UB35	978 aa		5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	RASAL3	Q86YV0	1011 aa		5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	ANKRD13A	Q8IZ07	590 aa		5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	KIAA0319L	Q8IZA0	1049 aa		5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	CELF5	Q8N6W0	485 aa	Known RBP	5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	RP9	Q8TA86	221 aa	Known RBP	5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	PPP1R35	Q8TAP8	253 aa		5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	B3GNT5	Q9BYG0	378 aa		5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	ZMAT3	Q9HA38	289 aa	Known RBP	5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	GLOD4	Q9HC38	313 aa		5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	DKK3	Q9UBP4	350 aa		5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	RGS17	Q9UGC6	210 aa	Predicted RBP	5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	STAP2	Q9UGK3	403 aa		5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	TCEAL9	Q9UHQ7	104 aa		5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	SERTAD3	Q9UJW9	196 aa		5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	PADI4	Q9UM07	663 aa		5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	SSX2IP	Q9Y2D8	614 aa		5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	EID1	Q9Y6B2	187 aa		5.21	□□□□□ -1.58
MATR3-223	ENST00000514402	BTN3A1	O00481	513 aa		5.2	□□□□□ -1.58
MATR3-223	ENST00000514402	JTB	O76095	146 aa		5.2	□□□□□ -1.58
MATR3-223	ENST00000514402	TJP3	O95049	919 aa		5.2	□□□□□ -1.58
MATR3-223	ENST00000514402	SCGB1D2	O95969	90 aa		5.2	□□□□□ -1.58
MATR3-223	ENST00000514402	PRKCG	P05129	697 aa		5.2	□□□□□ -1.58
MATR3-223	ENST00000514402	JUP	P14923	745 aa		5.2	□□□□□ -1.58
MATR3-223	ENST00000514402	EIF2B5	Q13144	721 aa	Known RBP	5.2	□□□□□ -1.58
MATR3-223	ENST00000514402	RGS7BP	Q6MZT1	257 aa	Predicted RBP	5.2	□□□□□ -1.58
MATR3-223	ENST00000514402	MAVS	Q7Z434	540 aa		5.2	□□□□□ -1.58
MATR3-223	ENST00000514402	SRRM1	Q8IYB3	904 aa	Known RBP	5.2	□□□□□ -1.58
MATR3-223	ENST00000514402	DNAJC5G	Q8N7S2	189 aa		5.2	□□□□□ -1.58
MATR3-223	ENST00000514402	IL31RA	Q8NI17	732 aa		5.2	□□□□□ -1.58
MATR3-223	ENST00000514402	ATG4A	Q8WYN0	398 aa		5.2	□□□□□ -1.58
MATR3-223	ENST00000514402	ANKS1A	Q92625	1134 aa		5.2	□□□□□ -1.58
MATR3-223	ENST00000514402	P2RX7	Q99572	595 aa	Known RBP	5.2	□□□□□ -1.58
MATR3-223	ENST00000514402	FAM204A	Q9H8W3	233 aa		5.2	□□□□□ -1.58
MATR3-223	ENST00000514402	ZSCAN32	Q9NX65	697 aa		5.2	□□□□□ -1.58
MATR3-223	ENST00000514402	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	5.2	□□□□□ -1.58
MATR3-223	ENST00000514402	ADAM21	Q9UKJ8	722 aa		5.2	□□□□□ -1.58
MATR3-223	ENST00000514402	ST3GAL5	Q9UNP4	418 aa		5.2	□□□□□ -1.58
MATR3-223	ENST00000514402	GOLGA6C	A6NDK9	693 aa		5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	GOLGA6B	A6NDN3	693 aa		5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	ISM1	B1AKI9	464 aa		5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	MYO1F	O00160	1098 aa		5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	TBC1D4	O60343	1298 aa		5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	IL6R	P08887	468 aa	Predicted RBP	5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	GOLGA6D	P0CG33	693 aa		5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	CDK4	P11802	303 aa		5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	DGKE	P52429	567 aa		5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	CACNB3	P54284	484 aa		5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	SLC10A2	Q12908	348 aa	Predicted RBP	5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	FOXF2	Q12947	444 aa		5.19	□□□□□ -1.58
MATR3-223	ENST00000514402	MYO1E	Q12965	1108 aa		5.19	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms