RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 CNTN6Q9UQ52 1028 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 FARP1Q9Y4F1 1045 aaPredicted RBP7.82□□□□□ -1.16
CLIP1-205ENST00000514271 MAFBQ9Y5Q3 323 aaPredicted RBP7.82□□□□□ -1.16
CLIP1-205ENST00000514271 GMEB1Q9Y692 573 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 POTEMA6NI47 508 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 CCDC169A6NNP5 214 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 FAM86B1E9PN63 330 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 KIAA0355O15063 1070 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 DHX15O43143 795 aaKnown RBP7.82□□□□□ -1.16
CLIP1-205ENST00000514271 DIAPH2O60879 1101 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 TTC4O95801 387 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 ALDH2P05091 517 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 LGALS2P05162 132 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 FAM86B2P0C5J1 330 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 SMIM18P0DKX4 95 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 TAL1P17542 331 aaPredicted RBP7.82□□□□□ -1.16
CLIP1-205ENST00000514271 ACTR2P61160 394 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 TRIM32Q13049 653 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 MFSD10Q14728 455 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 KCNA10Q16322 511 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 GSTA3Q16772 222 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 DHRS4L2Q6PKH6 230 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 C15orf39Q6ZRI6 1047 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 SYDE1Q6ZW31 735 aaPredicted RBP7.82□□□□□ -1.16
CLIP1-205ENST00000514271 C1orf186Q6ZWK4 172 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 SPATA21Q7Z572 469 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 MYLK4Q86YV6 388 aaPredicted RBP7.82□□□□□ -1.16
CLIP1-205ENST00000514271 UBR7Q8N806 425 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 SLC17A8Q8NDX2 589 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 OR6Y1Q8NGX8 325 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 GIMAP7Q8NHV1 300 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 HSD17B14Q9BPX1 270 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 NIFKQ9BYG3 293 aaKnown RBP7.82□□□□□ -1.16
CLIP1-205ENST00000514271 PIF1Q9H611 641 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 ZNF302Q9NR11 478 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 DBR1Q9UK59 544 aaKnown RBP7.82□□□□□ -1.16
CLIP1-205ENST00000514271 CCDC85CA6NKD9 419 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 KLF11O14901 512 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 CASQ2O14958 399 aaPredicted RBP7.82□□□□□ -1.16
CLIP1-205ENST00000514271 ATP9BO43861 1147 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 EVI5O60447 810 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 ASGR1P07306 291 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 SPATA31D3P0C874 917 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 CPOXP36551 454 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 E2F5Q15329 346 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 ASIC2Q16515 512 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 KNOP1Q1ED39 458 aaKnown RBP7.82□□□□□ -1.16
CLIP1-205ENST00000514271 CBWD6Q4V339 395 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 SLC45A4Q5BKX6 768 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 XKR3Q5GH77 459 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 CBWD3Q5JTY5 395 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 CBWD5Q5RIA9 395 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 THEMIS2Q5TEJ8 643 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 SPATA31D4Q6ZUB0 917 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 RBM12BQ8IXT5 1001 aaKnown RBP7.82□□□□□ -1.16
CLIP1-205ENST00000514271 FAM71AQ8IYT1 594 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 AGGF1Q8N302 714 aaeCLIP7.82□□□□□ -1.16
CLIP1-205ENST00000514271 RIBC1Q8N443 379 aaPredicted RBP7.82□□□□□ -1.16
CLIP1-205ENST00000514271 SPDL1Q96EA4 605 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 THOC1Q96FV9 657 aaKnown RBP7.82□□□□□ -1.16
CLIP1-205ENST00000514271 EEF2KMTQ96G04 330 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 DDX27Q96GQ7 796 aaKnown RBP7.82□□□□□ -1.16
CLIP1-205ENST00000514271 RUNDC3BQ96NL0 473 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 EPAS1Q99814 870 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 DDX23Q9BUQ8 820 aaKnown RBP7.82□□□□□ -1.16
CLIP1-205ENST00000514271 KLHL14Q9P2G3 628 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 PCDHA12Q9UN75 941 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 ZNF510Q9Y2H8 683 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.82□□□□□ -1.16
CLIP1-205ENST00000514271 LTBP2Q14767 1821 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 C3orf70A6NLC5 250 aaPredicted RBP7.81□□□□□ -1.16
CLIP1-205ENST00000514271 TRIM64CA6NLI5 447 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 KRIT1O00522 736 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 AKR1B10O60218 316 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 ZNF862O60290 1169 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 LUC7L3O95232 432 aaKnown RBP7.81□□□□□ -1.16
CLIP1-205ENST00000514271 TGDSO95455 350 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 MYL3P08590 195 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 ALDH3A1P30838 453 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 PTDSS1P48651 473 aaKnown RBP7.81□□□□□ -1.16
CLIP1-205ENST00000514271 PAPOLAP51003 745 aaKnown RBP7.81□□□□□ -1.16
CLIP1-205ENST00000514271 ASIC1P78348 528 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 LONRF1Q17RB8 773 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 KCTD19Q17RG1 926 aaPredicted RBP7.81□□□□□ -1.16
CLIP1-205ENST00000514271 PLEKHG6Q3KR16 790 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 RBBP8NLQ8NC74 664 aaPredicted RBP7.81□□□□□ -1.16
CLIP1-205ENST00000514271 PIGOQ8TEQ8 1089 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 AFG1LQ8WV93 481 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 CADM1Q9BY67 442 aaKnown RBP7.81□□□□□ -1.16
CLIP1-205ENST00000514271 TYW1Q9NV66 732 aaKnown RBP7.81□□□□□ -1.16
CLIP1-205ENST00000514271 NMRK1Q9NWW6 199 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 MKS1Q9NXB0 559 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 PATJQ8NI35 1801 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 COL4A6Q14031 1691 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 A0A1B0GVG6 124 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 MIF4GDA9UHW6 222 aaKnown RBP7.81□□□□□ -1.16
CLIP1-205ENST00000514271 ZSCAN9O15535 394 aaPredicted RBP7.81□□□□□ -1.16
CLIP1-205ENST00000514271 ARIH2O95376 493 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 FGGP02679 453 aa7.81□□□□□ -1.16
CLIP1-205ENST00000514271 PYGMP11217 842 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms