RNA–Protein interactions for RNA: ENST00000514183.5

RACK1-231, Transcript of receptor for activated C kinase 1, human

TSL 2

Gene RACK1, Length 1,439 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-231	ENST00000514183	CBWD6	Q4V339	395 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	CBWD3	Q5JTY5	395 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	CBWD5	Q5RIA9	395 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	SFMBT2	Q5VUG0	894 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	LAIR1	Q6GTX8	287 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	DPY19L2P1	Q6NXN4	242 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	LYPD8	Q6UX82	237 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	SYT10	Q6XYQ8	523 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	ZNF852	Q6ZMS4	543 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	SRGAP1	Q7Z6B7	1085 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	CBWD2	Q8IUF1	395 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	CCDC170	Q8IYT3	715 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	LRRC71	Q8N4P6	559 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	LINC01465	Q8N7H1	131 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	ZSWIM2	Q8NEG5	633 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	KIF18A	Q8NI77	898 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	TCP11	Q8WWU5	503 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	PRPF31	Q8WWY3	499 aa	Known RBP	7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	AUTS2	Q8WXX7	1259 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	POMGNT1	Q8WZA1	660 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	SYN2	Q92777	582 aa	Predicted RBP	7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	CCDC42	Q96M95	316 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	PPP1R16B	Q96T49	567 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	USB1	Q9BQ65	265 aa	Known RBP	7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	DDX23	Q9BUQ8	820 aa	Known RBP	7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	HERC2P3	Q9BVR0	1158 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	SIX2	Q9NPC8	291 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	LZTFL1	Q9NQ48	299 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	DNAI1	Q9UI46	699 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	SMG5	Q9UPR3	1016 aa	Known RBP	7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	INPP5F	Q9Y2H2	1132 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	REXO2	Q9Y3B8	237 aa	Known RBP	7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	PAXBP1	Q9Y5B6	917 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	FHOD1	Q9Y613	1164 aa		7.17	□□□□□ -1.26
RACK1-231	ENST00000514183	FAM208B	Q5VWN6	2430 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	MAP1B	P46821	2468 aa	Known RBP	7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	IGKV6-21	A0A0C4DH24	114 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	FAM170B	A6NMN3	283 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	EIF3CL	B5ME19	914 aa	Known RBP	7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	NRP1	O14786	923 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	TEX28	O15482	410 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	LILRB5	O75023	590 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	N4BP1	O75113	896 aa	Known RBP	7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	IPO7	O95373	1038 aa	Known RBP	7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	PIGR	P01833	764 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	PLEK	P08567	350 aa	Predicted RBP	7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	POU2F2	P09086	479 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	FBXO45	P0C2W1	286 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	UCHL3	P15374	230 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	GART	P22102	1010 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	FSHR	P23945	695 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	HOXA9	P31269	272 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	CTH	P32929	405 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	EIF4A3	P38919	411 aa	Known RBP	7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	ARHGAP25	P42331	645 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	SLC11A1	P49279	550 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	GNG11	P61952	73 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	KRT83	P78385	493 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	LSM11	P83369	360 aa	Known RBP eCLIP	7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	DSG1	Q02413	1049 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	CSTF1	Q05048	431 aa	Known RBP	7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	LAMTOR4	Q0VGL1	99 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	HTR4	Q13639	388 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	RAPGEF1	Q13905	1077 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	SNRNP35	Q16560	246 aa	Known RBP	7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	SLC44A4	Q53GD3	710 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	C1orf220	Q5T0J3	134 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	LIN9	Q5TKA1	542 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	GJB7	Q6PEY0	223 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	TRIM65	Q6PJ69	517 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	MRPL10	Q7Z7H8	261 aa	Known RBP	7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	SCUBE3	Q8IX30	993 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	DCLK2	Q8N568	766 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	ANKK1	Q8NFD2	765 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	PLEKHO2	Q8TD55	490 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	PSPC1	Q8WXF1	523 aa	Known RBP	7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	KCNN1	Q92952	543 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	SPAG5	Q96R06	1193 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	EIF3C	Q99613	913 aa	Known RBP	7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	FAM213A	Q9BRX8	229 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	DEF6	Q9H4E7	631 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	ARHGAP20	Q9P2F6	1191 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	SUCLA2	Q9P2R7	463 aa	Predicted RBP	7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	AJAP1	Q9UKB5	411 aa	Predicted RBP	7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	CDH7	Q9ULB5	785 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	USP20	Q9Y2K6	914 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	PCDHB2	Q9Y5E7	798 aa		7.16	□□□□□ -1.26
RACK1-231	ENST00000514183	PHLPP2	Q6ZVD8	1323 aa		7.15	□□□□□ -1.26
RACK1-231	ENST00000514183	FRYL	O94915	3013 aa		7.15	□□□□□ -1.26
RACK1-231	ENST00000514183		K7ERI5	159 aa		7.15	□□□□□ -1.27
RACK1-231	ENST00000514183	TK2	O00142	265 aa		7.15	□□□□□ -1.27
RACK1-231	ENST00000514183	C2CD2L	O14523	706 aa		7.15	□□□□□ -1.27
RACK1-231	ENST00000514183	SLC30A4	O14863	429 aa		7.15	□□□□□ -1.27
RACK1-231	ENST00000514183	P4HA2	O15460	535 aa		7.15	□□□□□ -1.27
RACK1-231	ENST00000514183	EXTL3	O43909	919 aa		7.15	□□□□□ -1.27
RACK1-231	ENST00000514183	KIF5C	O60282	957 aa		7.15	□□□□□ -1.27
RACK1-231	ENST00000514183	ERLIN2	O94905	339 aa		7.15	□□□□□ -1.27
RACK1-231	ENST00000514183	SERPING1	P05155	500 aa		7.15	□□□□□ -1.27
RACK1-231	ENST00000514183	EDN1	P05305	212 aa		7.15	□□□□□ -1.27
RACK1-231	ENST00000514183	RET	P07949	1114 aa		7.15	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms