RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 DDX11L8A8MPP1 907 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 INO80B-WBP1J3KQ70 363 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 PCDHGA12O60330 932 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 AGFG2O95081 481 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 LDOC1O95751 146 aaPredicted RBP8.35□□□□□ -1.07
CLDND1-229ENST00000513988 ARF4P18085 180 aaPredicted RBP8.35□□□□□ -1.07
CLDND1-229ENST00000513988 CDC25CP30307 473 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 DCTP40126 519 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 CLCNKBP51801 687 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 SETQ01105 290 aaPredicted RBP8.35□□□□□ -1.07
CLDND1-229ENST00000513988 SKIDA1Q1XH10 827 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 SGO2Q562F6 1265 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 ZNF280DQ6N043 979 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 ZNF589Q86UQ0 364 aaPredicted RBP8.35□□□□□ -1.07
CLDND1-229ENST00000513988 ITIH5Q86UX2 942 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 CDR2LQ86X02 465 aaPredicted RBP8.35□□□□□ -1.07
CLDND1-229ENST00000513988 CACTIN-AS1Q8N1I8 211 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 TTC16Q8NEE8 873 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 DNASE2BQ8WZ79 361 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 PSMG2Q969U7 264 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 VCPIP1Q96JH7 1222 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 TMEM87BQ96K49 555 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 FAM227BQ96M60 508 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 MTMR9Q96QG7 549 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 CNNM2Q9H8M5 875 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 TDP1Q9NUW8 608 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 NFE2L3Q9Y4A8 694 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 PCDHB3Q9Y5E6 796 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 TTC41PQ6P2S7 1318 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 ANKHD1Q8IWZ3 2542 aaKnown RBP8.34□□□□□ -1.07
CLDND1-229ENST00000513988 RP1L1Q8IWN7 2480 aaPredicted RBP8.34□□□□□ -1.07
CLDND1-229ENST00000513988 E2F8A0AVK6 867 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 A1L4Q6 167 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 CBX4O00257 560 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 SYN3O14994 580 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 TBX3O15119 743 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 CHMP2AO43633 222 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 ADAM23O75077 832 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 DXOO77932 396 aaKnown RBP8.34□□□□□ -1.07
CLDND1-229ENST00000513988 MPOP05164 745 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 OPRD1P41143 372 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 ACADVLP49748 655 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 GABREP78334 506 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 MTF1Q14872 753 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 INF2Q27J81 1249 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 EMC10Q5UCC4 262 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 CD300LGQ6UXG3 332 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 KDM7AQ6ZMT4 941 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 PTRH1Q86Y79 214 aaKnown RBP8.34□□□□□ -1.07
CLDND1-229ENST00000513988 MAB21L3Q8N8X9 362 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 C3orf58Q8NDZ4 430 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 RIN3Q8TB24 985 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 OSCP1Q8WVF1 389 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 TMEM143Q96AN5 459 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 CNDP2Q96KP4 475 aaKnown RBP8.34□□□□□ -1.07
CLDND1-229ENST00000513988 UROC1Q96N76 676 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 PGLYRP2Q96PD5 576 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 MMS19Q96T76 1030 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 SLC25A18Q9H1K4 315 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 ZDHHC4Q9NPG8 344 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.34□□□□□ -1.07
CLDND1-229ENST00000513988 THSD1Q9NS62 852 aa8.34□□□□□ -1.07
CLDND1-229ENST00000513988 MED13LQ71F56 2210 aa8.33□□□□□ -1.08
CLDND1-229ENST00000513988 GPR37O15354 613 aa8.33□□□□□ -1.08
CLDND1-229ENST00000513988 ASAP2O43150 1006 aa8.33□□□□□ -1.08
CLDND1-229ENST00000513988 ANK1P16157 1881 aa8.33□□□□□ -1.08
CLDND1-229ENST00000513988 SFNP31947 248 aa8.33□□□□□ -1.08
CLDND1-229ENST00000513988 JAK3P52333 1124 aa8.33□□□□□ -1.08
CLDND1-229ENST00000513988 DUSP4Q13115 394 aa8.33□□□□□ -1.08
CLDND1-229ENST00000513988 MRPL58Q14197 206 aaKnown RBP8.33□□□□□ -1.08
CLDND1-229ENST00000513988 UPP1Q16831 310 aa8.33□□□□□ -1.08
CLDND1-229ENST00000513988 EML3Q32P44 896 aa8.33□□□□□ -1.08
CLDND1-229ENST00000513988 ZSCAN23Q3MJ62 389 aa8.33□□□□□ -1.08
CLDND1-229ENST00000513988 ARL13BQ3SXY8 428 aa8.33□□□□□ -1.08
CLDND1-229ENST00000513988 Q6ZNB5 142 aa8.33□□□□□ -1.08
CLDND1-229ENST00000513988 USP53Q70EK8 1073 aa8.33□□□□□ -1.08
CLDND1-229ENST00000513988 HEATR3Q7Z4Q2 680 aa8.33□□□□□ -1.08
CLDND1-229ENST00000513988 CATIPQ7Z7H3 387 aa8.33□□□□□ -1.08
CLDND1-229ENST00000513988 SGMS1Q86VZ5 419 aa8.33□□□□□ -1.08
CLDND1-229ENST00000513988 DCBLD1Q8N8Z6 715 aa8.33□□□□□ -1.08
CLDND1-229ENST00000513988 PI4K2BQ8TCG2 481 aa8.33□□□□□ -1.08
CLDND1-229ENST00000513988 CCDC97Q96F63 343 aaPredicted RBP8.33□□□□□ -1.08
CLDND1-229ENST00000513988 FAM20AQ96MK3 541 aa8.33□□□□□ -1.08
CLDND1-229ENST00000513988 ACAP3Q96P50 834 aa8.33□□□□□ -1.08
CLDND1-229ENST00000513988 CXCL16Q9H2A7 254 aa8.33□□□□□ -1.08
CLDND1-229ENST00000513988 SNX11Q9Y5W9 270 aa8.33□□□□□ -1.08
CLDND1-229ENST00000513988 MYO18AQ92614 2054 aaKnown RBP8.33□□□□□ -1.08
CLDND1-229ENST00000513988 TMEM131Q92545 1883 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 hCG_1642624A0A1W2PR95 340 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 ERICH2A1L162 156 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 MYMKA6NI61 221 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 IFIT3O14879 490 aaKnown RBP8.32□□□□□ -1.08
CLDND1-229ENST00000513988 B4GALT5O43286 388 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 STBD1O95210 358 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 NFATC1O95644 943 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 APODP05090 189 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 CALM1P0DP23 149 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 CALM2P0DP24 149 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 CALM3P0DP25 149 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 NCAM1P13591 858 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms