RNA–Protein interactions for RNA: ENST00000513557.5

GYPB-214, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 277 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-214ENST00000513557 IPO4Q8TEX9 1081 aaKnown RBP4.72□□□□□ -1.65
GYPB-214ENST00000513557 TRAPPC12Q8WVT3 735 aa4.72□□□□□ -1.65
GYPB-214ENST00000513557 MIEF2Q96C03 454 aa4.72□□□□□ -1.65
GYPB-214ENST00000513557 MARS2Q96GW9 593 aaKnown RBP4.72□□□□□ -1.65
GYPB-214ENST00000513557 SNX27Q96L92 541 aa4.72□□□□□ -1.65
GYPB-214ENST00000513557 SLC46A1Q96NT5 459 aa4.72□□□□□ -1.65
GYPB-214ENST00000513557 TTYH3Q9C0H2 523 aa4.72□□□□□ -1.65
GYPB-214ENST00000513557 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.72□□□□□ -1.65
GYPB-214ENST00000513557 MAGEH1Q9H213 219 aa4.72□□□□□ -1.65
GYPB-214ENST00000513557 DHX36Q9H2U1 1008 aaKnown RBP4.72□□□□□ -1.65
GYPB-214ENST00000513557 NECTIN3Q9NQS3 549 aa4.72□□□□□ -1.65
GYPB-214ENST00000513557 RGL1Q9NZL6 768 aa4.72□□□□□ -1.65
GYPB-214ENST00000513557 GRHPRQ9UBQ7 328 aa4.72□□□□□ -1.65
GYPB-214ENST00000513557 FBXO9Q9UK97 447 aaPredicted RBP4.72□□□□□ -1.65
GYPB-214ENST00000513557 SHOC2Q9UQ13 582 aa4.72□□□□□ -1.65
GYPB-214ENST00000513557 SLC30A1Q9Y6M5 507 aa4.72□□□□□ -1.65
GYPB-214ENST00000513557 DUSP10Q9Y6W6 482 aa4.72□□□□□ -1.65
GYPB-214ENST00000513557 NUP153P49790 1475 aaKnown RBP4.72□□□□□ -1.65
GYPB-214ENST00000513557 A0A087WZ62 844 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 AQP12BA6NM10 295 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 H7C4K7 107 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 CCP110O43303 1012 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 TRIM13O60858 407 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 ATXN1LP0C7T5 689 aaKnown RBP4.71□□□□□ -1.66
GYPB-214ENST00000513557 TPH1P17752 444 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 CHRM3P20309 590 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 GABRB3P28472 473 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 CNR2P34972 360 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 SERPINF1P36955 418 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 CPT1AP50416 773 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 ITGA8P53708 1063 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 KRT17Q04695 432 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 PPFIA1Q13136 1202 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 PRKG1Q13976 671 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 BOP1Q14137 746 aaKnown RBP4.71□□□□□ -1.66
GYPB-214ENST00000513557 MAPRE1Q15691 268 aaKnown RBP4.71□□□□□ -1.66
GYPB-214ENST00000513557 MGAT5BQ3V5L5 792 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 AGAP9Q5VTM2 703 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 TSHZ3Q63HK5 1081 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 USP17L6PQ6QN14 398 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 LAYNQ6UX15 382 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 SYT12Q8IV01 421 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 ANKRD18AQ8IVF6 992 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 FUKQ8N0W3 1084 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 TMTC2Q8N394 836 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 PSD4Q8NDX1 1056 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 NSUN7Q8NE18 718 aaKnown RBP4.71□□□□□ -1.66
GYPB-214ENST00000513557 ZNF384Q8TF68 577 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 TBC1D20Q96BZ9 403 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 GCC1Q96CN9 775 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 TRIB1Q96RU8 372 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 PNKPQ96T60 521 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 MESP1Q9BRJ9 268 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 TMEM120AQ9BXJ8 343 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 XPNPEP3Q9NQH7 507 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 ETAA1Q9NY74 926 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 PPP4R1LQ9P1A2 415 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.71□□□□□ -1.66
GYPB-214ENST00000513557 ZFR2Q9UPR6 939 aaKnown RBP4.71□□□□□ -1.66
GYPB-214ENST00000513557 ATP11BQ9Y2G3 1177 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 GPR52Q9Y2T5 361 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 EEA1Q15075 1411 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 AKNAQ7Z591 1439 aa4.71□□□□□ -1.66
GYPB-214ENST00000513557 FANCAO15360 1455 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 DENND4BO75064 1496 aaPredicted RBP4.7□□□□□ -1.66
GYPB-214ENST00000513557 CCDC195A0A1B0GUA6 201 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 CAPN14A8MX76 684 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 LEFTY2O00292 366 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 TRIM38O00635 465 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 PIP5K1BO14986 540 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 DHRS4L1P0CG22 281 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 PTDSS1P48651 473 aaKnown RBP4.7□□□□□ -1.66
GYPB-214ENST00000513557 NHLH2Q02577 135 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 FOXO1Q12778 655 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 FSTL1Q12841 308 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 PTK2BQ14289 1009 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 NPY5RQ15761 445 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 ARL6IP4Q66PJ3 421 aaKnown RBP4.7□□□□□ -1.66
GYPB-214ENST00000513557 PLAG1Q6DJT9 500 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 FCRL6Q6DN72 434 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 TAF2Q6P1X5 1199 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 CRTC1Q6UUV9 634 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 SLC30A10Q6XR72 485 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 KRBA2Q6ZNG9 492 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 POLNQ7Z5Q5 900 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 SGMS1Q86VZ5 419 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 RHOT2Q8IXI1 618 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 LRRC56Q8IYG6 542 aaPredicted RBP4.7□□□□□ -1.66
GYPB-214ENST00000513557 AFAP1Q8N556 730 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 OR56A1Q8NGH5 318 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 FAM71BQ8TC56 605 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 TOX2Q96NM4 488 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 SORBS1Q9BX66 1292 aaKnown RBP4.7□□□□□ -1.66
GYPB-214ENST00000513557 RNPEPQ9H4A4 650 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 TMEM8AQ9HCN3 771 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 SAGE1Q9NXZ1 904 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 IGSF9Q9P2J2 1179 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 ZNF69Q9UC07 566 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 LZTS1Q9Y250 596 aa4.7□□□□□ -1.66
GYPB-214ENST00000513557 RAD54BQ9Y620 910 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms