RNA–Protein interactions for RNA: ENST00000513248.1

NUP54-212, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-212ENST00000513248 GADL1Q6ZQY3 521 aa4.69□□□□□ -1.66
NUP54-212ENST00000513248 MED25Q71SY5 747 aa4.69□□□□□ -1.66
NUP54-212ENST00000513248 PPP1R3BQ86XI6 285 aa4.69□□□□□ -1.66
NUP54-212ENST00000513248 PDSS2Q86YH6 399 aa4.69□□□□□ -1.66
NUP54-212ENST00000513248 TCP11L2Q8N4U5 519 aa4.69□□□□□ -1.66
NUP54-212ENST00000513248 OR56A1Q8NGH5 318 aa4.69□□□□□ -1.66
NUP54-212ENST00000513248 NUP133Q8WUM0 1156 aa4.69□□□□□ -1.66
NUP54-212ENST00000513248 MRGPRX1Q96LB2 322 aa4.69□□□□□ -1.66
NUP54-212ENST00000513248 TTPALQ9BTX7 342 aa4.69□□□□□ -1.66
NUP54-212ENST00000513248 ATP6V0A4Q9HBG4 840 aa4.69□□□□□ -1.66
NUP54-212ENST00000513248 MAN1C1Q9NR34 630 aa4.69□□□□□ -1.66
NUP54-212ENST00000513248 LMBRD1Q9NUN5 540 aa4.69□□□□□ -1.66
NUP54-212ENST00000513248 PNPOQ9NVS9 261 aa4.69□□□□□ -1.66
NUP54-212ENST00000513248 RLIMQ9NVW2 624 aa4.69□□□□□ -1.66
NUP54-212ENST00000513248 SLC45A2Q9UMX9 530 aa4.69□□□□□ -1.66
NUP54-212ENST00000513248 QRICH2Q9H0J4 1663 aa4.69□□□□□ -1.66
NUP54-212ENST00000513248 USP6P35125 1406 aa4.69□□□□□ -1.66
NUP54-212ENST00000513248 SPATA31A5Q5VU36 1347 aa4.69□□□□□ -1.66
NUP54-212ENST00000513248 SPATA31A7Q8IWB4 1347 aa4.69□□□□□ -1.66
NUP54-212ENST00000513248 TRPM1Q7Z4N2 1603 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 CENPVL1A0A0U1RR11 272 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 TMEM200CA6NKL6 621 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 VSTM5A8MXK1 200 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 MARCH6O60337 910 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 LPXNO60711 386 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 HAUS5O94927 633 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 NDUFA10O95299 355 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 ANXA1P04083 346 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 CKBP12277 381 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 ARFIP2P53365 341 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 RAB1AP62820 205 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 NOMO3P69849 1222 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 KIF22Q14807 665 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 GRM3Q14832 879 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 PTPAQ15257 358 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 BEAN1Q3B7T3 259 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 ANO6Q4KMQ2 910 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 NOMO2Q5JPE7 1267 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 NPNTQ6UXI9 565 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 TMPRSS9Q7Z410 1059 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 DEFB132Q7Z7B7 95 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 DGKHQ86XP1 1220 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 LTV1Q96GA3 475 aaPredicted RBP4.68□□□□□ -1.66
NUP54-212ENST00000513248 COG3Q96JB2 828 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 C1orf43Q9BWL3 253 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 REXO4Q9GZR2 422 aaKnown RBP4.68□□□□□ -1.66
NUP54-212ENST00000513248 GPR35Q9HC97 309 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 DDX21Q9NR30 783 aaKnown RBP eCLIP4.68□□□□□ -1.66
NUP54-212ENST00000513248 GEMIN8Q9NWZ8 242 aaKnown RBP4.68□□□□□ -1.66
NUP54-212ENST00000513248 HSFX1Q9UBD0 423 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 ABCF2Q9UG63 623 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 ZDHHC8Q9ULC8 765 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 ATP11BQ9Y2G3 1177 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 FPGT-TNNI3KV9GXZ4 949 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 BLMP54132 1417 aaPredicted RBP4.68□□□□□ -1.66
NUP54-212ENST00000513248 USP19O94966 1318 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 SPATA31A1Q5TZJ5 1347 aa4.68□□□□□ -1.66
NUP54-212ENST00000513248 COL14A1Q05707 1796 aaKnown RBP4.68□□□□□ -1.66
NUP54-212ENST00000513248 USP47Q96K76 1375 aa4.67□□□□□ -1.66
NUP54-212ENST00000513248 SSH2Q76I76 1423 aa4.67□□□□□ -1.66
NUP54-212ENST00000513248 CDHR4A6H8M9 788 aa4.67□□□□□ -1.66
NUP54-212ENST00000513248 GOLGA6CA6NDK9 693 aa4.67□□□□□ -1.66
NUP54-212ENST00000513248 GOLGA6BA6NDN3 693 aa4.67□□□□□ -1.66
NUP54-212ENST00000513248 E9PLN8 166 aa4.67□□□□□ -1.66
NUP54-212ENST00000513248 RHOBTB3O94955 611 aa4.67□□□□□ -1.66
NUP54-212ENST00000513248 CFIP05156 583 aa4.67□□□□□ -1.66
NUP54-212ENST00000513248 HLA-DOAP06340 250 aa4.67□□□□□ -1.66
NUP54-212ENST00000513248 GOLGA6DP0CG33 693 aa4.67□□□□□ -1.66
NUP54-212ENST00000513248 BMPR1AP36894 532 aa4.67□□□□□ -1.66
NUP54-212ENST00000513248 AMPHP49418 695 aa4.67□□□□□ -1.66
NUP54-212ENST00000513248 CCDC93Q567U6 631 aa4.67□□□□□ -1.66
NUP54-212ENST00000513248 TSHZ3Q63HK5 1081 aa4.67□□□□□ -1.66
NUP54-212ENST00000513248 B3GNTL1Q67FW5 361 aaPredicted RBP4.67□□□□□ -1.66
NUP54-212ENST00000513248 LAIR1Q6GTX8 287 aa4.67□□□□□ -1.66
NUP54-212ENST00000513248 COL23A1Q86Y22 540 aaPredicted RBP4.67□□□□□ -1.66
NUP54-212ENST00000513248 FITM2Q8N6M3 262 aa4.67□□□□□ -1.66
NUP54-212ENST00000513248 KLHL32Q96NJ5 620 aa4.67□□□□□ -1.66
NUP54-212ENST00000513248 VKORC1Q9BQB6 163 aa4.67□□□□□ -1.66
NUP54-212ENST00000513248 GOLGA6AQ9NYA3 693 aa4.67□□□□□ -1.66
NUP54-212ENST00000513248 CLSPNQ9HAW4 1339 aa4.67□□□□□ -1.66
NUP54-212ENST00000513248 PLCH1Q4KWH8 1693 aa4.67□□□□□ -1.66
NUP54-212ENST00000513248 CPDO75976 1380 aa4.66□□□□□ -1.66
NUP54-212ENST00000513248 TRPM3Q9HCF6 1732 aaPredicted RBP4.66□□□□□ -1.66
NUP54-212ENST00000513248 MARF1Q9Y4F3 1742 aaKnown RBP4.66□□□□□ -1.66
NUP54-212ENST00000513248 GLI3P10071 1580 aa4.66□□□□□ -1.66
NUP54-212ENST00000513248 FAM227AF5H4B4 570 aa4.66□□□□□ -1.66
NUP54-212ENST00000513248 EXOC5O00471 708 aa4.66□□□□□ -1.66
NUP54-212ENST00000513248 KIAA0391O15091 583 aaKnown RBP4.66□□□□□ -1.66
NUP54-212ENST00000513248 FRS3O43559 492 aa4.66□□□□□ -1.66
NUP54-212ENST00000513248 ZBED1O96006 694 aa4.66□□□□□ -1.66
NUP54-212ENST00000513248 HMGB1P09429 215 aaKnown RBP4.66□□□□□ -1.66
NUP54-212ENST00000513248 FCER1AP12319 257 aa4.66□□□□□ -1.66
NUP54-212ENST00000513248 BMP5P22003 454 aa4.66□□□□□ -1.66
NUP54-212ENST00000513248 DDX6P26196 483 aaKnown RBP eCLIP4.66□□□□□ -1.66
NUP54-212ENST00000513248 PIK3CGP48736 1102 aa4.66□□□□□ -1.66
NUP54-212ENST00000513248 POU6F2P78424 691 aaPredicted RBP4.66□□□□□ -1.66
NUP54-212ENST00000513248 MXRA7P84157 204 aa4.66□□□□□ -1.66
NUP54-212ENST00000513248 CREMQ03060 361 aa4.66□□□□□ -1.66
NUP54-212ENST00000513248 OCA2Q04671 838 aa4.66□□□□□ -1.66
NUP54-212ENST00000513248 SCAPQ12770 1279 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms