RNA–Protein interactions for RNA: ENST00000512925.1

PFDN1-205, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 900 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-205ENST00000512925 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.24□□□□□ -0.61
PFDN1-205ENST00000512925 NUP205Q92621 2012 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 PCNX2A6NKB5 2137 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 ANO9A1A5B4 782 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 UPK3BL1B0FP48 263 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 UPK3BL2E5RIL1 263 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 TADA3O75528 432 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 ODC1P11926 461 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 HNRNPLP14866 589 aaKnown RBP eCLIP11.23□□□□□ -0.616e-6■□□□□ 11.3
PFDN1-205ENST00000512925 DHPSP49366 369 aaPredicted RBP11.23□□□□□ -0.61
PFDN1-205ENST00000512925 FAM193AP78312 1265 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 SIM1P81133 766 aaPredicted RBP11.23□□□□□ -0.61
PFDN1-205ENST00000512925 LMAN2Q12907 356 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 STRN3Q13033 797 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 PSMD2Q13200 908 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 PDIA5Q14554 519 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 MTF1Q14872 753 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 TAF12Q16514 161 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 EML3Q32P44 896 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 TRIM61Q5EBN2 209 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 C9orf57Q5W0N0 161 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 ANO7Q6IWH7 933 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 CC2D1AQ6P1N0 951 aaPredicted RBP11.23□□□□□ -0.61
PFDN1-205ENST00000512925 FRMD1Q8N878 549 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 IGSF22Q8N9C0 903 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 STKLD1Q8NE28 680 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 MDGA1Q8NFP4 955 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 SPPL2BQ8TCT7 592 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 C2orf15Q8WU43 125 aaKnown RBP11.23□□□□□ -0.61
PFDN1-205ENST00000512925 PTCD2Q8WV60 388 aaKnown RBP11.23□□□□□ -0.61
PFDN1-205ENST00000512925 OSCP1Q8WVF1 389 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 COL26A1Q96A83 441 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 FNBP1Q96RU3 617 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 SLC32A1Q9H598 525 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 DUS2Q9NX74 493 aaKnown RBP11.23□□□□□ -0.61
PFDN1-205ENST00000512925 DNM3Q9UQ16 869 aa11.23□□□□□ -0.61
PFDN1-205ENST00000512925 FLNBO75369 2602 aaKnown RBP11.23□□□□□ -0.61
PFDN1-205ENST00000512925 PP2D1A8MPX8 630 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 PLS3P13797 630 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 ENGP17813 658 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 PAX3P23760 479 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 GUCY2CP25092 1073 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 PTGER3P43115 390 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 MAPK8P45983 427 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 GPR15P49685 360 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 GUCY1B3Q02153 619 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 PPP2R3AQ06190 1150 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 ST3GAL1Q11201 340 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 SMARCB1Q12824 385 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 ZNF77Q15935 545 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 CRY1Q16526 586 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 JADE1Q6IE81 842 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 C19orf48Q6RUI8 117 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 CHCHD4Q8N4Q1 142 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 CPA6Q8N4T0 437 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 SNX29Q8TEQ0 813 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 EXOC4Q96A65 974 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 SLC22A12Q96S37 553 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 TSPAN18Q96SJ8 248 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 CYP2S1Q96SQ9 504 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 MMTAG2Q9BU76 263 aaKnown RBP11.22□□□□□ -0.61
PFDN1-205ENST00000512925 LINC00597Q9H2U6 94 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 TMLHEQ9NVH6 421 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 MBD1Q9UIS9 605 aaPredicted RBP11.22□□□□□ -0.61
PFDN1-205ENST00000512925 WNT6Q9Y6F9 365 aa11.22□□□□□ -0.61
PFDN1-205ENST00000512925 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 TNFRSF10BO14763 440 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 XPOTO43592 962 aaKnown RBP11.21□□□□□ -0.61
PFDN1-205ENST00000512925 CDC25AP30304 524 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 OPRD1P41143 372 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 P2RY2P41231 377 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 FAM160A1Q05DH4 1040 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 RAD51AP2Q09MP3 1159 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 USP4Q13107 963 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 TRIM29Q14134 588 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 IL17AQ16552 155 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 GAB4Q2WGN9 574 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 C2orf27AQ580R0 203 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 TTC38Q5R3I4 469 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 SDHAF4Q5VUM1 108 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 PEAR1Q5VY43 1037 aaPredicted RBP11.21□□□□□ -0.61
PFDN1-205ENST00000512925 SLC23A3Q6PIS1 610 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 RAB44Q7Z6P3 723 aaPredicted RBP11.21□□□□□ -0.61
PFDN1-205ENST00000512925 PDZD3Q86UT5 571 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 SYT12Q8IV01 421 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 TMEFF1Q8IYR6 380 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 CCDC33Q8N5R6 958 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 LRRC15Q8TF66 581 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 RLN3Q8WXF3 142 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 MRPS31Q92665 395 aaKnown RBP11.21□□□□□ -0.61
PFDN1-205ENST00000512925 KCNN1Q92952 543 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 TIPINQ9BVW5 301 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 NUSAP1Q9BXS6 441 aaKnown RBP11.21□□□□□ -0.61
PFDN1-205ENST00000512925 FSCN3Q9NQT6 498 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 ABI2Q9NYB9 513 aaPredicted RBP11.21□□□□□ -0.61
PFDN1-205ENST00000512925 CPSF3Q9UKF6 684 aaKnown RBP11.21□□□□□ -0.61
PFDN1-205ENST00000512925 DSEQ9UL01 958 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 MMP17Q9ULZ9 603 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 LIMCH1Q9UPQ0 1083 aa11.21□□□□□ -0.61
PFDN1-205ENST00000512925 THADAQ6YHU6 1953 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms