RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 RIMS2Q9UQ26 1411 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 STRCQ7RTU9 1775 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 ADGRL2O95490 1459 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 SCAF11Q99590 1463 aaKnown RBP5.03□□□□□ -1.6
HTT-210ENST00000512909 GAGE12BA1L429 117 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 GAGE12HA6NDE8 117 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 F5H697 171 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 APOL1O14791 398 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 TPD52L2O43399 206 aaKnown RBP5.03□□□□□ -1.6
HTT-210ENST00000512909 LDHAP00338 332 aaKnown RBP5.03□□□□□ -1.6
HTT-210ENST00000512909 PIM1P11309 404 aaPredicted RBP5.03□□□□□ -1.6
HTT-210ENST00000512909 FCER1AP12319 257 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 SLC6A4P31645 630 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 PIK3CBP42338 1070 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 CARSP49589 748 aaKnown RBP5.03□□□□□ -1.6
HTT-210ENST00000512909 UCP3P55916 312 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 CTBP1Q13363 440 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 INSCQ1MX18 579 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 TIGD2Q4W5G0 525 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 USP39Q53GS9 565 aaKnown RBP5.03□□□□□ -1.6
HTT-210ENST00000512909 C3orf38Q5JPI3 329 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 SPTY2D1Q68D10 685 aaPredicted RBP5.03□□□□□ -1.6
HTT-210ENST00000512909 DNERQ8NFT8 737 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 RAPGEF4Q8WZA2 1011 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 PMM1Q92871 262 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 RIPOR3Q96MK2 946 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 ZSWIM1Q9BR11 485 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 NAA15Q9BXJ9 866 aaKnown RBP5.03□□□□□ -1.6
HTT-210ENST00000512909 SLC46A2Q9BY10 475 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 VPS11Q9H270 941 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 MYH16Q9H6N6 1097 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 ZNF212Q9UDV6 495 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 MYO3AQ8NEV4 1616 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 CEP152O94986 1710 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 AATKQ6ZMQ8 1374 aa5.03□□□□□ -1.6
HTT-210ENST00000512909 EIF2AK4Q9P2K8 1649 aaKnown RBP5.02□□□□□ -1.61
HTT-210ENST00000512909 TRGV11A0A075B6L2 103 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 KRTAP23-1A1A580 65 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 KLRG2A4D1S0 409 aaPredicted RBP5.02□□□□□ -1.61
HTT-210ENST00000512909 MYADML2A6NDP7 307 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 MBD3L4A6NDZ8 208 aaPredicted RBP5.02□□□□□ -1.61
HTT-210ENST00000512909 MBD3L3A6NE82 208 aaPredicted RBP5.02□□□□□ -1.61
HTT-210ENST00000512909 RASA4BC9J798 803 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 PYCARD-AS1I3L0S3 204 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 MYO1FO00160 1098 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 WNT10BO00744 389 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 RASA4O43374 803 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 RGS10O43665 173 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 TRIAP1O43715 76 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 NDUFA10O95299 355 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 ABHD16AO95870 558 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 SETSIPP0DME0 302 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 KCNA2P16389 499 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 LAG3P18627 525 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 CHRM3P20309 590 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 TNFSF4P23510 183 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 KLRC1P26715 233 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 SLC11A2P49281 568 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 PRIM2P49643 509 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 PRKAG1P54619 331 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 RPS16P62249 146 aaKnown RBP5.02□□□□□ -1.61
HTT-210ENST00000512909 SLC29A2Q14542 456 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 PDCD4Q53EL6 469 aaKnown RBP5.02□□□□□ -1.61
HTT-210ENST00000512909 FBLN7Q53RD9 439 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 FAM209BQ5JX69 171 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 MEX3CQ5U5Q3 659 aaKnown RBP5.02□□□□□ -1.61
HTT-210ENST00000512909 AGAP9Q5VTM2 703 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 FBXO38Q6PIJ6 1188 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 COL23A1Q86Y22 540 aaPredicted RBP5.02□□□□□ -1.61
HTT-210ENST00000512909 TMPRSS6Q8IU80 811 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 ZNF276Q8N554 614 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 ENAHQ8N8S7 591 aaPredicted RBP5.02□□□□□ -1.61
HTT-210ENST00000512909 PSD4Q8NDX1 1056 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 NSUN7Q8NE18 718 aaKnown RBP5.02□□□□□ -1.61
HTT-210ENST00000512909 VPS37AQ8NEZ2 397 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 SNX19Q92543 992 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 SPSB4Q96A44 273 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 NMD3Q96D46 503 aaKnown RBP5.02□□□□□ -1.61
HTT-210ENST00000512909 SLC46A1Q96NT5 459 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 PLEKHG4BQ96PX9 1271 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 RBM15Q96T37 977 aaKnown RBP eCLIP5.02□□□□□ -1.61
HTT-210ENST00000512909 HEPHQ9BQS7 1158 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 BRIP1Q9BX63 1249 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 TLR10Q9BXR5 811 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 EIF2AQ9BY44 585 aaKnown RBP5.02□□□□□ -1.61
HTT-210ENST00000512909 ALOXE3Q9BYJ1 711 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 TBC1D23Q9NUY8 699 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 TMEM94Q12767 1356 aa5.02□□□□□ -1.61
HTT-210ENST00000512909 SPATA31D1Q6ZQQ2 1576 aa5.01□□□□□ -1.61
HTT-210ENST00000512909 NOS1P29475 1434 aa5.01□□□□□ -1.61
HTT-210ENST00000512909 NAIPQ13075 1403 aa5.01□□□□□ -1.61
HTT-210ENST00000512909 SETD5Q9C0A6 1442 aa5.01□□□□□ -1.61
HTT-210ENST00000512909 RRBP1Q9P2E9 1410 aaKnown RBP5.01□□□□□ -1.61
HTT-210ENST00000512909 TRIM43BA6NCK2 446 aa5.01□□□□□ -1.61
HTT-210ENST00000512909 F5H423 210 aaPredicted RBP5.01□□□□□ -1.61
HTT-210ENST00000512909 FOXD2O60548 495 aaPredicted RBP5.01□□□□□ -1.61
HTT-210ENST00000512909 FOSP01100 380 aaPredicted RBP5.01□□□□□ -1.61
HTT-210ENST00000512909 ANXA2P07355 339 aaKnown RBP5.01□□□□□ -1.61
HTT-210ENST00000512909 SLC5A1P13866 664 aa5.01□□□□□ -1.61
HTT-210ENST00000512909 LRPAP1P30533 357 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms