RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-238	ENST00000512620	PGAP2	Q9UHJ9	254 aa		4.11	□□□□□ -1.75
CAST-238	ENST00000512620	ITGB1BP2	Q9UKP3	347 aa		4.11	□□□□□ -1.75
CAST-238	ENST00000512620	ZDHHC8	Q9ULC8	765 aa		4.11	□□□□□ -1.75
CAST-238	ENST00000512620	ZFR2	Q9UPR6	939 aa	Known RBP	4.11	□□□□□ -1.75
CAST-238	ENST00000512620	PCDHGB3	Q9Y5G1	929 aa		4.11	□□□□□ -1.75
CAST-238	ENST00000512620	ZNF644	Q9H582	1327 aa	Predicted RBP	4.11	□□□□□ -1.75
CAST-238	ENST00000512620	AATK	Q6ZMQ8	1374 aa		4.11	□□□□□ -1.75
CAST-238	ENST00000512620	ANKRD30A	Q9BXX3	1397 aa		4.11	□□□□□ -1.75
CAST-238	ENST00000512620	PRAG1	Q86YV5	1406 aa		4.11	□□□□□ -1.75
CAST-238	ENST00000512620	NKTR	P30414	1462 aa	Known RBP	4.11	□□□□□ -1.75
CAST-238	ENST00000512620	SHANK2	Q9UPX8	1470 aa		4.11	□□□□□ -1.75
CAST-238	ENST00000512620	URB2	Q14146	1524 aa	Known RBP	4.11	□□□□□ -1.75
CAST-238	ENST00000512620	ADAMTS12	P58397	1594 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	KIAA0556	O60303	1618 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	TARBP1	Q13395	1621 aa	Known RBP	4.1	□□□□□ -1.75
CAST-238	ENST00000512620		A0A0G2JLL6	359 aa	Predicted RBP	4.1	□□□□□ -1.75
CAST-238	ENST00000512620		A0A1W2PPC4	97 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	CCDC78	A2IDD5	438 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	DRGX	A6NNA5	263 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	CAPN14	A8MX76	684 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	HNRNPDL	O14979	420 aa	Known RBP	4.1	□□□□□ -1.75
CAST-238	ENST00000512620	GPR42	O15529	346 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	THAP12	O43422	761 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	GRP	P07492	148 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	FCER1A	P12319	257 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	ALAS1	P13196	640 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	EEF1G	P26641	437 aa	Known RBP	4.1	□□□□□ -1.75
CAST-238	ENST00000512620	DDIT3	P35638	169 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	RPS19	P39019	145 aa	Known RBP	4.1	□□□□□ -1.75
CAST-238	ENST00000512620	MAPK9	P45984	424 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	HSPA7	P48741	367 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	SLC11A2	P49281	568 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	HABP2	Q14520	560 aa	Predicted RBP	4.1	□□□□□ -1.75
CAST-238	ENST00000512620	MPEG1	Q2M385	716 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	SLC35G1	Q2M3R5	365 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	CC2D1B	Q5T0F9	858 aa	Known RBP	4.1	□□□□□ -1.75
CAST-238	ENST00000512620	EMC10	Q5UCC4	262 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	DCAF12L1	Q5VU92	463 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	CLEC4G	Q6UXB4	293 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	RFX8	Q6ZV50	586 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	PCGF5	Q86SE9	256 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	USP37	Q86T82	979 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	MICU3	Q86XE3	530 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	TXLNB	Q8N3L3	684 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	FITM2	Q8N6M3	262 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	RNF152	Q8N8N0	203 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	ATP11C	Q8NB49	1132 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	PDPR	Q8NCN5	879 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	4.1	□□□□□ -1.75
CAST-238	ENST00000512620	OR56A3	Q8NH54	315 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	CXorf38	Q8TB03	319 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	TRAPPC12	Q8WVT3	735 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	IPCEF1	Q8WWN9	437 aa	Predicted RBP	4.1	□□□□□ -1.75
CAST-238	ENST00000512620	LRRC46	Q96FV0	321 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	MARS2	Q96GW9	593 aa	Known RBP	4.1	□□□□□ -1.75
CAST-238	ENST00000512620	NEU1	Q99519	415 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	ZSWIM1	Q9BR11	485 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	STK33	Q9BYT3	514 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	TTYH3	Q9C0H2	523 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	NELFA	Q9H3P2	528 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	ZHX3	Q9H4I2	956 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	UPF2	Q9HAU5	1272 aa	Known RBP	4.1	□□□□□ -1.75
CAST-238	ENST00000512620	GRPEL1	Q9HAV7	217 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	VSX1	Q9NZR4	365 aa	Predicted RBP	4.1	□□□□□ -1.75
CAST-238	ENST00000512620	CHMP5	Q9NZZ3	219 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	SWAP70	Q9UH65	585 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	MED16	Q9Y2X0	877 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	CGNL1	Q0VF96	1302 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	GPRASP1	Q5JY77	1395 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	PTPRG	P23470	1445 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	ERBIN	Q96RT1	1412 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	SCAPER	Q9BY12	1400 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	ANKRD50	Q9ULJ7	1429 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	NUP153	P49790	1475 aa	Known RBP	4.1	□□□□□ -1.75
CAST-238	ENST00000512620	ABCC10	Q5T3U5	1492 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	SYNM	O15061	1565 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	MYOM1	P52179	1685 aa		4.1	□□□□□ -1.75
CAST-238	ENST00000512620	PMS2P1	A4D2B8	440 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	TRIM43B	A6NCK2	446 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	MFAP3L	O75121	409 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	RASSF9	O75901	435 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	FGFR2	P21802	821 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	PPP2R1A	P30153	589 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	APOBEC3A	P31941	199 aa	Predicted RBP	4.09	□□□□□ -1.75
CAST-238	ENST00000512620	ALDH9A1	P49189	494 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	TERF1	P54274	439 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	HTRA4	P83105	476 aa	Predicted RBP	4.09	□□□□□ -1.75
CAST-238	ENST00000512620	NHLH2	Q02577	135 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	RAB32	Q13637	225 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	PRKG1	Q13976	671 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	BOP1	Q14137	746 aa	Known RBP	4.09	□□□□□ -1.75
CAST-238	ENST00000512620	WDR43	Q15061	677 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
CAST-238	ENST00000512620	UBXN11	Q5T124	520 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	JAKMIP3	Q5VZ66	844 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	TSHZ3	Q63HK5	1081 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.09	□□□□□ -1.75
CAST-238	ENST00000512620	MFSD5	Q6N075	450 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	ZDHHC24	Q6UX98	284 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	4.09	□□□□□ -1.75
CAST-238	ENST00000512620		Q6ZRM9	215 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms