RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, human

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX41-215	ENST00000512431	CCDC33	Q8N5R6	958 aa		13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	FSIP1	Q8NA03	581 aa		13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	RIN3	Q8TB24	985 aa		13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	WHAMM	Q8TF30	809 aa		13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	PYM1	Q9BRP8	204 aa	Known RBP	13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	NOL7	Q9UMY1	257 aa	Known RBP	13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	SLC6A14	Q9UN76	642 aa		13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	ATG2B	Q96BY7	2078 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	WDFY3	Q8IZQ1	3526 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	DMXL2	Q8TDJ6	3036 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431		K7EQS6	105 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	PIR	O00625	290 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	OGT	O15294	1046 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	HOXD12	P35452	270 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	P2RY2	P41231	377 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	RPL10A	P62906	217 aa	Known RBP	13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	TSPY1	Q01534	308 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	RAD51AP2	Q09MP3	1159 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	TMEM132D	Q14C87	1099 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	ZNF77	Q15935	545 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	NFE2	Q16621	373 aa	Predicted RBP	13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	DUOXA1	Q1HG43	343 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	RABEPK	Q7Z6M1	372 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	LRRTM3	Q86VH5	581 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	EFCAB13	Q8IY85	973 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	PGBD3	Q8N328	593 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	OLIG1	Q8TAK6	271 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	RLN3	Q8WXF3	142 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	PI4K2A	Q9BTU6	479 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	HAPLN2	Q9GZV7	340 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	TMEM74B	Q9NUR3	256 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	LARS	Q9P2J5	1176 aa	Known RBP	13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	DERA	Q9Y315	318 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	NBEA	Q8NFP9	2946 aa		13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.55	□□□□□ -0.24
DDX41-215	ENST00000512431	THADA	Q6YHU6	1953 aa		13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	IGF2R	P11717	2491 aa		13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	NUP205	Q92621	2012 aa		13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	ZFYVE26	Q68DK2	2539 aa		13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	MYMK	A6NI61	221 aa		13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	HNRNPDL	O14979	420 aa	Known RBP	13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	JAK2	O60674	1132 aa		13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	PTGER3	P43115	390 aa		13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	TRAPPC10	P48553	1259 aa		13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	TAF6	P49848	677 aa		13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	SCAP	Q12770	1279 aa		13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	ME3	Q16798	604 aa		13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	COL28A1	Q2UY09	1125 aa		13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	HSF5	Q4G112	596 aa	Predicted RBP	13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	IGSF22	Q8N9C0	903 aa		13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	SH3RF2	Q8TEC5	729 aa		13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	FNBP1	Q96RU3	617 aa		13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	CYP2S1	Q96SQ9	504 aa		13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	MSTO1	Q9BUK6	570 aa		13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	FOXP1	Q9H334	677 aa	Predicted RBP	13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	CCDC86	Q9H6F5	360 aa	Known RBP	13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	MBD1	Q9UIS9	605 aa	Predicted RBP	13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	PILRB	Q9UKJ0	227 aa		13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	PCDHB9	Q9Y5E1	797 aa		13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	FASN	P49327	2511 aa	Known RBP	13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	AKAP13	Q12802	2813 aa		13.54	□□□□□ -0.24
DDX41-215	ENST00000512431	ANO9	A1A5B4	782 aa		13.53	□□□□□ -0.24
DDX41-215	ENST00000512431	AP5Z1	O43299	807 aa		13.53	□□□□□ -0.24
DDX41-215	ENST00000512431	ADRB2	P07550	413 aa		13.53	□□□□□ -0.24
DDX41-215	ENST00000512431	GPR15	P49685	360 aa		13.53	□□□□□ -0.24
DDX41-215	ENST00000512431	PDE6C	P51160	858 aa		13.53	□□□□□ -0.24
DDX41-215	ENST00000512431	USP4	Q13107	963 aa		13.53	□□□□□ -0.24
DDX41-215	ENST00000512431	KCNB1	Q14721	858 aa		13.53	□□□□□ -0.24
DDX41-215	ENST00000512431	ZRSR1	Q15695	479 aa	Known RBP	13.53	□□□□□ -0.24
DDX41-215	ENST00000512431	DDR2	Q16832	855 aa		13.53	□□□□□ -0.24
DDX41-215	ENST00000512431	SV2C	Q496J9	727 aa		13.53	□□□□□ -0.24
DDX41-215	ENST00000512431	EOGT	Q5NDL2	527 aa		13.53	□□□□□ -0.24
DDX41-215	ENST00000512431	WSCD1	Q658N2	575 aa		13.53	□□□□□ -0.24
DDX41-215	ENST00000512431	TMEM92	Q6UXU6	159 aa		13.53	□□□□□ -0.24
DDX41-215	ENST00000512431	ARL14EP	Q8N8R7	260 aa	Predicted RBP	13.53	□□□□□ -0.24
DDX41-215	ENST00000512431	TRMT2B	Q96GJ1	504 aa	Known RBP	13.53	□□□□□ -0.24
DDX41-215	ENST00000512431	C8orf76	Q96K31	380 aa		13.53	□□□□□ -0.24
DDX41-215	ENST00000512431	LINC00597	Q9H2U6	94 aa		13.53	□□□□□ -0.24
DDX41-215	ENST00000512431	ASB7	Q9H672	318 aa		13.53	□□□□□ -0.24
DDX41-215	ENST00000512431	ATXN2	Q99700	1313 aa	Known RBP	13.53	□□□□□ -0.24
DDX41-215	ENST00000512431	DSP	P15924	2871 aa	Known RBP	13.52	□□□□□ -0.24
DDX41-215	ENST00000512431	KPNA7	A9QM74	516 aa		13.52	□□□□□ -0.25
DDX41-215	ENST00000512431	NOL4	O94818	638 aa		13.52	□□□□□ -0.25
DDX41-215	ENST00000512431	KLF8	O95600	359 aa	Predicted RBP	13.52	□□□□□ -0.25
DDX41-215	ENST00000512431	CAPNS1	P04632	268 aa		13.52	□□□□□ -0.25
DDX41-215	ENST00000512431	SYP	P08247	313 aa		13.52	□□□□□ -0.25
DDX41-215	ENST00000512431	NFIC	P08651	508 aa		13.52	□□□□□ -0.25
DDX41-215	ENST00000512431	SERPINF2	P08697	491 aa		13.52	□□□□□ -0.25
DDX41-215	ENST00000512431	HDC	P19113	662 aa		13.52	□□□□□ -0.25
DDX41-215	ENST00000512431	SCP2	P22307	547 aa		13.52	□□□□□ -0.25
DDX41-215	ENST00000512431	ITPKA	P23677	461 aa		13.52	□□□□□ -0.25
DDX41-215	ENST00000512431	TIE1	P35590	1138 aa		13.52	□□□□□ -0.25
DDX41-215	ENST00000512431	OPRD1	P41143	372 aa		13.52	□□□□□ -0.25
DDX41-215	ENST00000512431	SDHAF4	Q5VUM1	108 aa		13.52	□□□□□ -0.25
DDX41-215	ENST00000512431	SLC36A4	Q6YBV0	504 aa		13.52	□□□□□ -0.25
DDX41-215	ENST00000512431	MINDY1	Q8N5J2	469 aa		13.52	□□□□□ -0.25
DDX41-215	ENST00000512431	ALLC	Q8N6M5	410 aa		13.52	□□□□□ -0.25
DDX41-215	ENST00000512431	C4orf32	Q8N8J7	132 aa		13.52	□□□□□ -0.25
DDX41-215	ENST00000512431	TXNDC5	Q8NBS9	432 aa	Known RBP	13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms