RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 BEST2Q8NFU1 509 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CYP2W1Q8TAV3 490 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF398Q8TD17 642 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 FAM84AQ96KN4 292 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLF1Q9BQI6 1058 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 GPATCH1Q9BRR8 931 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SARGQ9BW04 601 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 OXCT2Q9BYC2 517 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 FAM107BQ9H098 131 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCDC8Q9H0W5 538 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SYNCQ9H7C4 482 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PARVBQ9HBI1 364 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ATP13A1Q9HD20 1204 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PRDM8Q9NQV8 689 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 STIM2Q9P246 746 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 STK26Q9P289 416 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 BAG5Q9UL15 447 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF652Q9Y2D9 606 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 RP1P56715 2156 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 FREM3P0C091 2139 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 A0A0X1KG70 313 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SMCO2A6NFE2 343 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 B4DXG7 233 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 RFXAPO00287 272 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 POLR2DO15514 142 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 RNASEH1O60930 286 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ERN1O75460 977 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 RNF8O76064 485 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 VNN1O95497 513 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 VNN2O95498 520 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SSBP05455 408 aaKnown RBP eCLIP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ARSAP15289 507 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 TAC1P20366 129 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CD247P20963 164 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 RPL13P26373 211 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 GRIA1P42261 906 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 GCLCP48506 637 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PXNP49023 591 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SH3BGRP55822 239 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 MAP3K7CLP57077 242 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 NOP14P78316 857 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 TCF15Q12870 199 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 AIMP1Q12904 312 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 MYBPC3Q14896 1274 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PUS10Q3MIT2 529 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 TCP11X2Q5H9J9 407 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 FAM182AQ5T1J6 154 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF648Q5T619 568 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 HMBOX1Q6NT76 420 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PADI6Q6TGC4 694 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ANKRD13DQ6ZTN6 518 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 WDR53Q7Z5U6 358 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 LCA5Q86VQ0 697 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PASD1Q8IV76 773 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CHERPQ8IWX8 916 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 MAML2Q8IZL2 1156 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ARHGAP24Q8N264 748 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 TEX9Q8N6V9 391 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 GAB3Q8WWW8 586 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CYFIP2Q96F07 1278 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PIWIL1Q96J94 861 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 IFT74Q96LB3 600 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 C16orf45Q96MC5 204 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 TINF2Q9BSI4 451 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 IMPG2Q9BZV3 1241 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 GOLPH3Q9H4A6 298 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 NTN4Q9HB63 628 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SRP68Q9UHB9 627 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 HERC5Q9UII4 1024 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CDC23Q9UJX2 597 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SONP18583 2426 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SVILO95425 2214 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 TNXBP22105 4242 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 A0A1B0GW55 424 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 GOLGA8CPA6NN73 597 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 NUTM2BA6NNL0 878 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 NUTM2EB1AL46 878 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ANHXE9PGG2 379 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 UBXN8O00124 270 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CBFA2T3O75081 653 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 TACC1O75410 805 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 GJB3O75712 270 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PSMD10O75832 226 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 NDUFA10O95299 355 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 IGLV3-25P01717 112 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 FESP07332 822 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 KRT16P08779 473 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 DUX4L2P0CJ85 424 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 DUX4L3P0CJ86 424 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 DUX4L4P0CJ87 422 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 DUX4L5P0CJ88 424 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 DUX4L6P0CJ89 424 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 DUX4L7P0CJ90 424 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CYP2D6P10635 497 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 INSRRP14616 1297 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PTPN7P35236 360 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PSMC4P43686 418 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 FOSBP53539 338 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SMTNP53814 917 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SEC24CP53992 1094 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms