RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 H0YIN7 160 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 DTNBO60941 627 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 OFD1O75665 1012 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 RPLP2P05387 115 aaKnown RBP4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 NR4A1P22736 598 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 ATP8B2P98198 1209 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 TARDBPQ13148 414 aaKnown RBP eCLIP4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 MTM1Q13496 603 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 MLC1Q15049 377 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 FAM214AQ32MH5 1076 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 PGS1Q32NB8 556 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 IFIT1BQ5T764 474 aaKnown RBP4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 TTC7BQ86TV6 843 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 C2CD5Q86YS7 1000 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 ZGPATQ8N5A5 531 aaKnown RBP4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 FBXO18Q8NFZ0 1043 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 OR52N2Q8NGI0 321 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 SLC35G2Q8TBE7 412 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 KAT5Q92993 513 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 VOPP1Q96AW1 172 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 MVB12AQ96EY5 273 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 MRGPRX4Q96LA9 322 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 HTATIP2Q9BUP3 242 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 MLST8Q9BVC4 326 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 LSM14BQ9BX40 385 aaKnown RBP4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 KCNH6Q9H252 994 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 TDP1Q9NUW8 608 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 TMEM140Q9NV12 185 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 MOCS1Q9NZB8 636 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 ZNHIT2Q9UHR6 403 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 AJAP1Q9UKB5 411 aaPredicted RBP4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 CENPFP49454 3210 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 ROCK1Q13464 1354 aa4.5□□□□□ -1.69
TOPBP1-208ENST00000511439 KIF7Q2M1P5 1343 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 HTTP42858 3142 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 FAM208AQ9UK61 1670 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 GAGE12BA1L429 117 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 GAGE12HA6NDE8 117 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 B5MCH6 92 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 DIRC3C9JPN6 131 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 POLRMTO00411 1230 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 AP1G1O43747 822 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 GPR32O75388 356 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 DDCP20711 480 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 FPR1P21462 350 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 PCSK1P29120 753 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 ALDH1A3P47895 512 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 ZNF267Q14586 743 aaPredicted RBP4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 MINDY4Q4G0A6 757 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 AFMIDQ63HM1 303 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 ANKS6Q68DC2 871 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 GPRIN1Q7Z2K8 1008 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 PRIMA1Q86XR5 153 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 VRK3Q8IV63 474 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 DRC7Q8IY82 874 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 MAFAQ8NHW3 353 aaPredicted RBP4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 SLC35B2Q8TB61 432 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 IFI44Q8TCB0 444 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 NSUN6Q8TEA1 469 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 DIS3LQ8TF46 1054 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 STON2Q8WXE9 905 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 RAB24Q969Q5 203 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 LRGUKQ96M69 825 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 TAAR9Q96RI9 348 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 MAP3K14Q99558 947 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 NDC1Q9BTX1 674 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 TRIM17Q9Y577 477 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 ACTL7AQ9Y615 435 aa4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 POLR2AP24928 1970 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-208ENST00000511439 ADGRB1O14514 1584 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 BCORQ6W2J9 1755 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 GRID2IPA4D2P6 1211 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 GOLGA6CA6NDK9 693 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 GOLGA6BA6NDN3 693 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 ZAR1LA6NP61 321 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 TBKBP1A7MCY6 615 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 CXorf49A8MYA2 514 aaPredicted RBP4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 RNASET2O00584 256 aaKnown RBP4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 SLC16A6O15403 523 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 PJA2O43164 708 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 TEX33O43247 280 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 GOLGA6DP0CG33 693 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 AVPR1BP47901 424 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 USP14P54578 494 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 ITPK1Q13572 414 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 RAB39AQ14964 217 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 CCDC142Q17RM4 750 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 BMT2Q1RMZ1 405 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 SLC4A8Q2Y0W8 1093 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 LRIT3Q3SXY7 679 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 HECTD2Q5U5R9 776 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 STRIP1Q5VSL9 837 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 OTUD7BQ6GQQ9 843 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 C14orf80Q86SX3 495 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 RSPH3Q86UC2 560 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 XYLT1Q86Y38 959 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 WDR75Q8IWA0 830 aaKnown RBP4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 GRAMD1CQ8IYS0 662 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 TTC8Q8TAM2 541 aa4.48□□□□□ -1.69
TOPBP1-208ENST00000511439 C1GALT1C1Q96EU7 318 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms