RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 MAGEA9P43362 315 aa24.58■■□□□ 1.53
SNF8-209ENST00000510558 TNNC1P63316 161 aa24.58■■□□□ 1.53
SNF8-209ENST00000510558 TRPC3Q13507 836 aa24.58■■□□□ 1.53
SNF8-209ENST00000510558 C4orf50Q6ZRC1 276 aa24.58■■□□□ 1.53
SNF8-209ENST00000510558 CCDC47Q96A33 483 aaKnown RBP24.58■■□□□ 1.53
SNF8-209ENST00000510558 LRRC3BQ96PB8 259 aa24.58■■□□□ 1.53
SNF8-209ENST00000510558 SLC46A2Q9BY10 475 aa24.58■■□□□ 1.53
SNF8-209ENST00000510558 CRTAC1Q9NQ79 661 aa24.58■■□□□ 1.53
SNF8-209ENST00000510558 ZMYM5Q9UJ78 669 aa24.58■■□□□ 1.53
SNF8-209ENST00000510558 PIAS3Q9Y6X2 628 aa24.58■■□□□ 1.53
SNF8-209ENST00000510558 FANCMQ8IYD8 2048 aa24.57■■□□□ 1.52
SNF8-209ENST00000510558 PDXKO00764 312 aa24.57■■□□□ 1.52
SNF8-209ENST00000510558 NCAM2O15394 837 aa24.57■■□□□ 1.52
SNF8-209ENST00000510558 PHACTR2O75167 634 aa24.57■■□□□ 1.52
SNF8-209ENST00000510558 NOL4O94818 638 aa24.57■■□□□ 1.52
SNF8-209ENST00000510558 STAU1O95793 577 aaKnown RBP24.57■■□□□ 1.52
SNF8-209ENST00000510558 PDGFRBP09619 1106 aa24.57■■□□□ 1.52
SNF8-209ENST00000510558 MYL6P60660 151 aa24.57■■□□□ 1.52
SNF8-209ENST00000510558 WDR72Q3MJ13 1102 aa24.57■■□□□ 1.52
SNF8-209ENST00000510558 KRBA2Q6ZNG9 492 aa24.57■■□□□ 1.52
SNF8-209ENST00000510558 SCN4BQ8IWT1 228 aa24.57■■□□□ 1.52
SNF8-209ENST00000510558 CSGALNACT1Q8TDX6 532 aa24.57■■□□□ 1.52
SNF8-209ENST00000510558 PARD3BQ8TEW8 1205 aa24.57■■□□□ 1.52
SNF8-209ENST00000510558 TMEM174Q8WUU8 243 aa24.57■■□□□ 1.52
SNF8-209ENST00000510558 MYLPFQ96A32 169 aa24.57■■□□□ 1.52
SNF8-209ENST00000510558 CLDN23Q96B33 292 aa24.57■■□□□ 1.52
SNF8-209ENST00000510558 MRPL45Q9BRJ2 306 aaKnown RBP24.57■■□□□ 1.52
SNF8-209ENST00000510558 SPATA6Q9NWH7 488 aaPredicted RBP24.57■■□□□ 1.52
SNF8-209ENST00000510558 NDRG2Q9UN36 371 aaKnown RBP24.57■■□□□ 1.52
SNF8-209ENST00000510558 ZFHX2Q9C0A1 2572 aaPredicted RBP24.56■■□□□ 1.52
SNF8-209ENST00000510558 SLC38A8A6NNN8 435 aa24.56■■□□□ 1.52
SNF8-209ENST00000510558 LRRIQ3A6PVS8 624 aaPredicted RBP24.56■■□□□ 1.52
SNF8-209ENST00000510558 TACC1O75410 805 aa24.56■■□□□ 1.52
SNF8-209ENST00000510558 RHOBTB3O94955 611 aa24.56■■□□□ 1.52
SNF8-209ENST00000510558 NR3C1P04150 777 aa24.56■■□□□ 1.52
SNF8-209ENST00000510558 ATICP31939 592 aa24.56■■□□□ 1.52
SNF8-209ENST00000510558 MAGEA11P43364 429 aa24.56■■□□□ 1.52
SNF8-209ENST00000510558 DPYDQ12882 1025 aa24.56■■□□□ 1.52
SNF8-209ENST00000510558 MAPRE1Q15691 268 aaKnown RBP24.56■■□□□ 1.52
SNF8-209ENST00000510558 ARHGAP29Q52LW3 1261 aa24.56■■□□□ 1.52
SNF8-209ENST00000510558 TDRD10Q5VZ19 366 aaKnown RBP24.56■■□□□ 1.52
SNF8-209ENST00000510558 ASCL5Q7RTU5 278 aa24.56■■□□□ 1.52
SNF8-209ENST00000510558 CMTM8Q8IZV2 173 aa24.56■■□□□ 1.52
SNF8-209ENST00000510558 BPIFB1Q8TDL5 484 aa24.56■■□□□ 1.52
SNF8-209ENST00000510558 NKD2Q969F2 451 aaPredicted RBP24.56■■□□□ 1.52
SNF8-209ENST00000510558 SYAP1Q96A49 352 aaPredicted RBP24.56■■□□□ 1.52
SNF8-209ENST00000510558 TRMT2BQ96GJ1 504 aaKnown RBP24.56■■□□□ 1.52
SNF8-209ENST00000510558 SMG9Q9H0W8 520 aaKnown RBP24.56■■□□□ 1.52
SNF8-209ENST00000510558 XYLT2Q9H1B5 865 aa24.56■■□□□ 1.52
SNF8-209ENST00000510558 SNX25Q9H3E2 840 aa24.56■■□□□ 1.52
SNF8-209ENST00000510558 MAGEC2Q9UBF1 373 aaPredicted RBP24.56■■□□□ 1.52
SNF8-209ENST00000510558 UXTQ9UBK9 157 aaPredicted RBP24.56■■□□□ 1.52
SNF8-209ENST00000510558 ANAPC1Q9H1A4 1944 aa24.56■■□□□ 1.52
SNF8-209ENST00000510558 PRR23AA6NEV1 266 aa24.55■■□□□ 1.52
SNF8-209ENST00000510558 ZNF202O95125 648 aa24.55■■□□□ 1.52
SNF8-209ENST00000510558 FAM163BP0C2L3 166 aa24.55■■□□□ 1.52
SNF8-209ENST00000510558 DDX6P26196 483 aaKnown RBP eCLIP24.55■■□□□ 1.523e-6■□□□□ 10
SNF8-209ENST00000510558 GNL1P36915 607 aaPredicted RBP24.55■■□□□ 1.52
SNF8-209ENST00000510558 RPS9P46781 194 aaKnown RBP24.55■■□□□ 1.52
SNF8-209ENST00000510558 AP3M2P53677 418 aa24.55■■□□□ 1.52
SNF8-209ENST00000510558 CLDN10P78369 228 aa24.55■■□□□ 1.52
SNF8-209ENST00000510558 FZD5Q13467 585 aa24.55■■□□□ 1.52
SNF8-209ENST00000510558 BIRC3Q13489 604 aa24.55■■□□□ 1.52
SNF8-209ENST00000510558 MAB21L3Q8N8X9 362 aa24.55■■□□□ 1.52
SNF8-209ENST00000510558 OR6B3Q8NGW1 331 aa24.55■■□□□ 1.52
SNF8-209ENST00000510558 FAM3CQ92520 227 aa24.55■■□□□ 1.52
SNF8-209ENST00000510558 MRPS31Q92665 395 aaKnown RBP24.55■■□□□ 1.52
SNF8-209ENST00000510558 ZFYVE19Q96K21 471 aa24.55■■□□□ 1.52
SNF8-209ENST00000510558 NXF1Q9UBU9 619 aaKnown RBP24.55■■□□□ 1.52
SNF8-209ENST00000510558 NME7Q9Y5B8 376 aa24.55■■□□□ 1.52
SNF8-209ENST00000510558 CALUO43852 315 aaPredicted RBP24.54■■□□□ 1.52
SNF8-209ENST00000510558 TADA3O75528 432 aa24.54■■□□□ 1.52
SNF8-209ENST00000510558 KIF20AO95235 890 aa24.54■■□□□ 1.52
SNF8-209ENST00000510558 SP9P0CG40 484 aa24.54■■□□□ 1.52
SNF8-209ENST00000510558 AVPR1AP37288 418 aa24.54■■□□□ 1.52
SNF8-209ENST00000510558 TXNDC8Q6A555 127 aa24.54■■□□□ 1.52
SNF8-209ENST00000510558 VSTM1Q6UX27 236 aa24.54■■□□□ 1.52
SNF8-209ENST00000510558 MAML2Q8IZL2 1156 aaPredicted RBP24.54■■□□□ 1.52
SNF8-209ENST00000510558 ZNF687Q8N1G0 1237 aa24.54■■□□□ 1.52
SNF8-209ENST00000510558 CELF5Q8N6W0 485 aaKnown RBP24.54■■□□□ 1.52
SNF8-209ENST00000510558 MYRFLQ96LU7 910 aa24.54■■□□□ 1.52
SNF8-209ENST00000510558 LAMTOR5O43504 91 aa24.53■■□□□ 1.52
SNF8-209ENST00000510558 C4BPAP04003 597 aaKnown RBP24.53■■□□□ 1.52
SNF8-209ENST00000510558 BDNFP23560 247 aa24.53■■□□□ 1.52
SNF8-209ENST00000510558 CCNE1P24864 410 aa24.53■■□□□ 1.52
SNF8-209ENST00000510558 KPNA1P52294 538 aaPredicted RBP24.53■■□□□ 1.52
SNF8-209ENST00000510558 MLLT6P55198 1093 aaPredicted RBP24.53■■□□□ 1.52
SNF8-209ENST00000510558 CYP27A1Q02318 531 aa24.53■■□□□ 1.52
SNF8-209ENST00000510558 MDH1BQ5I0G3 518 aa24.53■■□□□ 1.52
SNF8-209ENST00000510558 CEP135Q66GS9 1140 aa24.53■■□□□ 1.52
SNF8-209ENST00000510558 MON1AQ86VX9 555 aa24.53■■□□□ 1.52
SNF8-209ENST00000510558 MYCBPAPQ8TBZ2 947 aa24.53■■□□□ 1.52
SNF8-209ENST00000510558 MSANTD3Q96H12 275 aa24.53■■□□□ 1.52
SNF8-209ENST00000510558 PCED1BQ96HM7 432 aa24.53■■□□□ 1.52
SNF8-209ENST00000510558 VRTNQ9H8Y1 702 aa24.53■■□□□ 1.52
SNF8-209ENST00000510558 TRAF3IP3Q9Y228 551 aa24.53■■□□□ 1.52
SNF8-209ENST00000510558 FRMD4BQ9Y2L6 1034 aa24.53■■□□□ 1.52
SNF8-209ENST00000510558 R4GN57 208 aa24.53■■□□□ 1.52
SNF8-209ENST00000510558 USP34Q70CQ2 3546 aa24.53■■□□□ 1.52
SNF8-209ENST00000510558 SOBPA7XYQ1 873 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms