RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 AARSP49588 968 aaKnown RBP eCLIP13.18□□□□□ -0.3
PRDM16-205ENST00000509860 SMC1AQ14683 1233 aaKnown RBP13.18□□□□□ -0.3
PRDM16-205ENST00000509860 DUPD1Q68J44 220 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 ZDHHC24Q6UX98 284 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 CCDC91Q7Z6B0 441 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 ACOT1Q86TX2 421 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 RIN2Q8WYP3 895 aaPredicted RBP13.18□□□□□ -0.3
PRDM16-205ENST00000509860 PAAF1Q9BRP4 392 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 CHST7Q9NS84 486 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 GDAP2Q9NXN4 497 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 NEU2Q9Y3R4 380 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 SCINQ9Y6U3 715 aa13.18□□□□□ -0.3
PRDM16-205ENST00000509860 MYO1FO00160 1098 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 ERLIN1O75477 346 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 TRPA1O75762 1119 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 VDRP11473 427 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 YWHAEP62258 255 aaKnown RBP13.17□□□□□ -0.3
PRDM16-205ENST00000509860 DSC3Q14574 896 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 MBTPS1Q14703 1052 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 SH3PXD2AQ5TCZ1 1133 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 LIN9Q5TKA1 542 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 AGMOQ6ZNB7 445 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 KATNAL2Q8IYT4 538 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 EMC1Q8N766 993 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 GRHL1Q9NZI5 618 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 PCYOX1Q9UHG3 505 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 M0QYV0 167 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 DAPK3O43293 454 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 PSTPIP1O43586 416 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 TKTP29401 623 aaKnown RBP13.17□□□□□ -0.3
PRDM16-205ENST00000509860 LPIN1Q14693 890 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 UAP1Q16222 522 aaPredicted RBP13.17□□□□□ -0.3
PRDM16-205ENST00000509860 PMF1Q6P1K2 205 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 CD300LGQ6UXG3 332 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 ERICH1Q86X53 443 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 ATG4AQ8WYN0 398 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 HEXIM2Q96MH2 286 aaKnown RBP13.17□□□□□ -0.3
PRDM16-205ENST00000509860 TXLNGYQ9BZA5 131 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 BPTFQ12830 3046 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 SIGLEC16A6NMB1 481 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 HMGCRP04035 888 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 TAF5Q15542 800 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 IFT81Q8WYA0 676 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 VIPAS39Q9H9C1 493 aa13.17□□□□□ -0.3
PRDM16-205ENST00000509860 MRPL47Q9HD33 250 aaKnown RBP13.17□□□□□ -0.3
PRDM16-205ENST00000509860 DDX20Q9UHI6 824 aaKnown RBP13.17□□□□□ -0.3
PRDM16-205ENST00000509860 UBQLN1Q9UMX0 589 aaKnown RBP13.17□□□□□ -0.3
PRDM16-205ENST00000509860 MLH1P40692 756 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 YARSP54577 528 aaKnown RBP13.16□□□□□ -0.3
PRDM16-205ENST00000509860 PTGISQ16647 500 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 GOLGA7BQ2TAP0 167 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 FBXO47Q5MNV8 452 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 FAM183BPQ6ZVS7 135 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 SND1Q7KZF4 910 aaKnown RBP eCLIP13.16□□□□□ -0.3
PRDM16-205ENST00000509860 BEST2Q8NFU1 509 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 PEBP4Q96S96 227 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 TRIM6Q9C030 488 aaPredicted RBP13.16□□□□□ -0.3
PRDM16-205ENST00000509860 METTL5Q9NRN9 209 aaKnown RBP13.16□□□□□ -0.3
PRDM16-205ENST00000509860 FAM105AQ9NUU6 356 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 PARP2Q9UGN5 583 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 LRCH4O75427 683 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 OAS2P29728 719 aaKnown RBP13.16□□□□□ -0.3
PRDM16-205ENST00000509860 LRPAP1P30533 357 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 MAP2K2P36507 400 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 KCNJ1P48048 391 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 LMAN1P49257 510 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 EPHB4P54760 987 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 LILRA4P59901 499 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 DNAJC24Q6P3W2 148 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 JAMLQ86YT9 394 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 IFT20Q8IY31 132 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 SLC35F5Q8WV83 523 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 RAPGEF5Q92565 580 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 FAM118BQ9BPY3 351 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 NT5C1AQ9BXI3 368 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 EPB41L4BQ9H329 900 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 FAM124BQ9H5Z6 455 aaPredicted RBP13.16□□□□□ -0.3
PRDM16-205ENST00000509860 FAM49BQ9NUQ9 324 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 E5RJQ4 531 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 RALAP11233 206 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 CCDC130P13994 396 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 CD52P31358 61 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 RPL34P49207 117 aaKnown RBP13.16□□□□□ -0.3
PRDM16-205ENST00000509860 SLITRK1Q96PX8 696 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 LRRC19Q9H756 370 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 IP6K2Q9UHH9 426 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 USTQ9Y2C2 406 aa13.16□□□□□ -0.3
PRDM16-205ENST00000509860 TTC36A6NLP5 189 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 KPNA7A9QM74 516 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 GOLGA8SH3BPF8 625 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 MED7O43513 233 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 MCM3P25205 808 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 VEGFBP49765 207 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 DR1Q01658 176 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 SGO2Q562F6 1265 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 FAM26DQ5JW98 314 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 TWF2Q6IBS0 349 aaKnown RBP13.15□□□□□ -0.3
PRDM16-205ENST00000509860 OLFML1Q6UWY5 402 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 C1orf54Q8WWF1 131 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 SLC24A3Q9HC58 644 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms