RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 GPBP1Q86WP2 473 aa11.15□□□□□ -0.62
MBD4-208ENST00000509828 SCN4BQ8IWT1 228 aa11.15□□□□□ -0.62
MBD4-208ENST00000509828 KCTD17Q8N5Z5 321 aa11.15□□□□□ -0.62
MBD4-208ENST00000509828 STKLD1Q8NE28 680 aa11.15□□□□□ -0.62
MBD4-208ENST00000509828 SPACA7Q96KW9 195 aa11.15□□□□□ -0.62
MBD4-208ENST00000509828 ZNF560Q96MR9 790 aa11.15□□□□□ -0.62
MBD4-208ENST00000509828 ASB7Q9H672 318 aa11.15□□□□□ -0.62
MBD4-208ENST00000509828 CPSF3Q9UKF6 684 aaKnown RBP11.15□□□□□ -0.62
MBD4-208ENST00000509828 ATRXP46100 2492 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 GREB1Q4ZG55 1949 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 ANO9A1A5B4 782 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 VWA3AA6NCI4 1184 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 MYMKA6NI61 221 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 TRAK2O60296 914 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 HUS1O60921 280 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 CFIP05156 583 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 HOXB3P14651 431 aaPredicted RBP11.14□□□□□ -0.63
MBD4-208ENST00000509828 HMGA1P17096 107 aaKnown RBP11.14□□□□□ -0.63
MBD4-208ENST00000509828 HDCP19113 662 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 ABCD1P33897 745 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 MYL7Q01449 175 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 BYSLQ13895 437 aaKnown RBP11.14□□□□□ -0.63
MBD4-208ENST00000509828 IL17AQ16552 155 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 LRSAM1Q6UWE0 723 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 TMEM150AQ86TG1 271 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 SPATA2LQ8IUW3 424 aaPredicted RBP11.14□□□□□ -0.63
MBD4-208ENST00000509828 EFCAB13Q8IY85 973 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 HDDC3Q8N4P3 179 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 SH3RF2Q8TEC5 729 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 CALML4Q96GE6 196 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 ZSCAN31Q96LW9 406 aaPredicted RBP11.14□□□□□ -0.63
MBD4-208ENST00000509828 PNMA5Q96PV4 448 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 MMTAG2Q9BU76 263 aaKnown RBP11.14□□□□□ -0.63
MBD4-208ENST00000509828 TMEM206Q9H813 350 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 PARVGQ9HBI0 331 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 POLMQ9NP87 494 aaPredicted RBP11.14□□□□□ -0.63
MBD4-208ENST00000509828 AGO2Q9UKV8 859 aaKnown RBP11.14□□□□□ -0.63
MBD4-208ENST00000509828 ODF2LQ9ULJ1 636 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 CITO14578 2027 aa11.14□□□□□ -0.63
MBD4-208ENST00000509828 FAM208BQ5VWN6 2430 aa11.13□□□□□ -0.63
MBD4-208ENST00000509828 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.13□□□□□ -0.63
MBD4-208ENST00000509828 CDX4O14627 284 aaPredicted RBP11.13□□□□□ -0.63
MBD4-208ENST00000509828 ZBTB24O43167 697 aaPredicted RBP11.13□□□□□ -0.63
MBD4-208ENST00000509828 HYAL3O43820 417 aaPredicted RBP11.13□□□□□ -0.63
MBD4-208ENST00000509828 ADRB2P07550 413 aa11.13□□□□□ -0.63
MBD4-208ENST00000509828 BCKDHBP21953 392 aa11.13□□□□□ -0.63
MBD4-208ENST00000509828 CYP2F1P24903 491 aa11.13□□□□□ -0.63
MBD4-208ENST00000509828 UBA7P41226 1012 aa11.13□□□□□ -0.63
MBD4-208ENST00000509828 PNPLA4P41247 253 aa11.13□□□□□ -0.63
MBD4-208ENST00000509828 TOB1P50616 345 aaPredicted RBP11.13□□□□□ -0.63
MBD4-208ENST00000509828 PDE6CP51160 858 aa11.13□□□□□ -0.63
MBD4-208ENST00000509828 SLC12A3P55017 1021 aa11.13□□□□□ -0.63
MBD4-208ENST00000509828 SIM1P81133 766 aaPredicted RBP11.13□□□□□ -0.63
MBD4-208ENST00000509828 TFAMQ00059 246 aaKnown RBP11.13□□□□□ -0.63
MBD4-208ENST00000509828 TMEFF1Q8IYR6 380 aa11.13□□□□□ -0.63
MBD4-208ENST00000509828 ARL14EPQ8N8R7 260 aaPredicted RBP11.13□□□□□ -0.63
MBD4-208ENST00000509828 USP33Q8TEY7 942 aa11.13□□□□□ -0.63
MBD4-208ENST00000509828 NOC3LQ8WTT2 800 aaKnown RBP11.13□□□□□ -0.63
MBD4-208ENST00000509828 CACTINQ8WUQ7 758 aaKnown RBP11.13□□□□□ -0.63
MBD4-208ENST00000509828 CNOT6LQ96LI5 555 aaKnown RBP11.13□□□□□ -0.63
MBD4-208ENST00000509828 REEP2Q9BRK0 252 aa11.13□□□□□ -0.63
MBD4-208ENST00000509828 GTPBP2Q9BX10 602 aaKnown RBP11.13□□□□□ -0.63
MBD4-208ENST00000509828 LINC00597Q9H2U6 94 aa11.13□□□□□ -0.63
MBD4-208ENST00000509828 DDX43Q9NXZ2 648 aaKnown RBP11.13□□□□□ -0.63
MBD4-208ENST00000509828 C2CD2Q9Y426 696 aa11.13□□□□□ -0.63
MBD4-208ENST00000509828 KIF3AQ9Y496 699 aa11.13□□□□□ -0.63
MBD4-208ENST00000509828 NEUROG3Q9Y4Z2 214 aa11.13□□□□□ -0.63
MBD4-208ENST00000509828 BAHCC1Q9P281 2608 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 SPAARA0A1B0GVQ0 90 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 ANKRD63C9JTQ0 380 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 IL18RAPO95256 599 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 KLF8O95600 359 aaPredicted RBP11.12□□□□□ -0.63
MBD4-208ENST00000509828 ABL1P00519 1130 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 PIGRP01833 764 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 KRT19P08727 400 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 ACAT1P24752 427 aaKnown RBP11.12□□□□□ -0.63
MBD4-208ENST00000509828 DPP6P42658 865 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 RING1Q06587 406 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 ST3GAL1Q11201 340 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 EML3Q32P44 896 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 RILPL1Q5EBL4 403 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 ARSHQ5FYA8 562 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 HYIQ5T013 277 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 SYT12Q8IV01 421 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 SPRYD3Q8NCJ5 442 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 WHAMMQ8TF30 809 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 RLN3Q8WXF3 142 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 POMGNT1Q8WZA1 660 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 ACBD6Q9BR61 282 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.12□□□□□ -0.63
MBD4-208ENST00000509828 TMLHEQ9NVH6 421 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 GTF3C4Q9UKN8 822 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 MMP17Q9ULZ9 603 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 AGAP1Q9UPQ3 857 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 CFAP47Q6ZTR5 3102 aa11.12□□□□□ -0.63
MBD4-208ENST00000509828 TNFRSF10BO14763 440 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 FAM189A1O60320 539 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 NOL4O94818 638 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 APODP05090 189 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 ENGP17813 658 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms