RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 HPS3Q969F9 1004 aa17.12■□□□□ 0.33
RAB40C-202ENST00000509637 MYRFLQ96LU7 910 aa17.12■□□□□ 0.33
RAB40C-202ENST00000509637 HHIPQ96QV1 700 aa17.12■□□□□ 0.33
RAB40C-202ENST00000509637 WNT6Q9Y6F9 365 aa17.12■□□□□ 0.33
RAB40C-202ENST00000509637 KIAA1549LQ6ZVL6 1849 aa17.12■□□□□ 0.33
RAB40C-202ENST00000509637 FRMD3A2A2Y4 597 aa17.11■□□□□ 0.33
RAB40C-202ENST00000509637 PRPF6O94906 941 aaKnown RBP17.11■□□□□ 0.33
RAB40C-202ENST00000509637 EPN2O95208 641 aa17.11■□□□□ 0.33
RAB40C-202ENST00000509637 IL18RAPO95256 599 aa17.11■□□□□ 0.33
RAB40C-202ENST00000509637 ZNF806P0C7X5 589 aa17.11■□□□□ 0.33
RAB40C-202ENST00000509637 CHRM1P11229 460 aaPredicted RBP17.11■□□□□ 0.33
RAB40C-202ENST00000509637 USP46P62068 366 aa17.11■□□□□ 0.33
RAB40C-202ENST00000509637 MESP2Q0VG99 397 aa17.11■□□□□ 0.33
RAB40C-202ENST00000509637 SMARCB1Q12824 385 aa17.11■□□□□ 0.33
RAB40C-202ENST00000509637 BFSP1Q12934 665 aa17.11■□□□□ 0.33
RAB40C-202ENST00000509637 CUL4AQ13619 759 aa17.11■□□□□ 0.33
RAB40C-202ENST00000509637 N4BP2L1Q5TBK1 243 aaPredicted RBP17.11■□□□□ 0.33
RAB40C-202ENST00000509637 TCEAL6Q6IPX3 200 aa17.11■□□□□ 0.33
RAB40C-202ENST00000509637 FAM171BQ6P995 826 aa17.11■□□□□ 0.33
RAB40C-202ENST00000509637 BRAPQ7Z569 592 aa17.11■□□□□ 0.33
RAB40C-202ENST00000509637 SFTPA1Q8IWL2 248 aa17.11■□□□□ 0.33
RAB40C-202ENST00000509637 CSGALNACT2Q8N6G5 542 aa17.11■□□□□ 0.33
RAB40C-202ENST00000509637 ARL14EPQ8N8R7 260 aaPredicted RBP17.11■□□□□ 0.33
RAB40C-202ENST00000509637 KBTBD7Q8WVZ9 684 aa17.11■□□□□ 0.33
RAB40C-202ENST00000509637 TCEAL3Q969E4 200 aa17.11■□□□□ 0.33
RAB40C-202ENST00000509637 HVCN1Q96D96 273 aa17.11■□□□□ 0.33
RAB40C-202ENST00000509637 ACBD6Q9BR61 282 aa17.11■□□□□ 0.33
RAB40C-202ENST00000509637 ECT2Q9H8V3 914 aa17.11■□□□□ 0.33
RAB40C-202ENST00000509637 MRPL44Q9H9J2 332 aaKnown RBP17.11■□□□□ 0.33
RAB40C-202ENST00000509637 CRTAC1Q9NQ79 661 aa17.11■□□□□ 0.33
RAB40C-202ENST00000509637 THG1LQ9NWX6 298 aaKnown RBP17.11■□□□□ 0.33
RAB40C-202ENST00000509637 GDAP2Q9NXN4 497 aa17.11■□□□□ 0.33
RAB40C-202ENST00000509637 SRPRBQ9Y5M8 271 aaKnown RBP17.11■□□□□ 0.33
RAB40C-202ENST00000509637 RPP40O75818 363 aaKnown RBP17.1■□□□□ 0.33
RAB40C-202ENST00000509637 CSH1P0DML2 217 aa17.1■□□□□ 0.33
RAB40C-202ENST00000509637 CSH2P0DML3 217 aa17.1■□□□□ 0.33
RAB40C-202ENST00000509637 AVPR1AP37288 418 aa17.1■□□□□ 0.33
RAB40C-202ENST00000509637 USP4Q13107 963 aa17.1■□□□□ 0.33
RAB40C-202ENST00000509637 ZNF268Q14587 947 aaPredicted RBP17.1■□□□□ 0.33
RAB40C-202ENST00000509637 POSTNQ15063 836 aa17.1■□□□□ 0.33
RAB40C-202ENST00000509637 TAF12Q16514 161 aa17.1■□□□□ 0.33
RAB40C-202ENST00000509637 EML3Q32P44 896 aa17.1■□□□□ 0.33
RAB40C-202ENST00000509637 PLK5Q496M5 336 aa17.1■□□□□ 0.33
RAB40C-202ENST00000509637 NT5DC4Q86YG4 428 aa17.1■□□□□ 0.33
RAB40C-202ENST00000509637 RASSF8Q8NHQ8 419 aa17.1■□□□□ 0.33
RAB40C-202ENST00000509637 GCNAQ96QF7 691 aa17.1■□□□□ 0.33
RAB40C-202ENST00000509637 ACCSQ96QU6 501 aa17.1■□□□□ 0.33
RAB40C-202ENST00000509637 MTMR12Q9C0I1 747 aa17.1■□□□□ 0.33
RAB40C-202ENST00000509637 DUSP15Q9H1R2 295 aaPredicted RBP17.1■□□□□ 0.33
RAB40C-202ENST00000509637 TMEM30AQ9NV96 361 aa17.1■□□□□ 0.33
RAB40C-202ENST00000509637 STK17AQ9UEE5 414 aa17.1■□□□□ 0.33
RAB40C-202ENST00000509637 INVSQ9Y283 1065 aa17.1■□□□□ 0.33
RAB40C-202ENST00000509637 SNX9Q9Y5X1 595 aa17.1■□□□□ 0.33
RAB40C-202ENST00000509637 MYOFQ9NZM1 2061 aa17.09■□□□□ 0.33
RAB40C-202ENST00000509637 CHD8Q9HCK8 2581 aa17.09■□□□□ 0.33
RAB40C-202ENST00000509637 CCDC163A0A0D9SF12 145 aa17.09■□□□□ 0.33
RAB40C-202ENST00000509637 GCNT3O95395 438 aa17.09■□□□□ 0.33
RAB40C-202ENST00000509637 BMP15O95972 392 aa17.09■□□□□ 0.33
RAB40C-202ENST00000509637 HNRNPLP14866 589 aaKnown RBP eCLIP17.09■□□□□ 0.33
RAB40C-202ENST00000509637 CEBPZQ03701 1054 aaKnown RBP17.09■□□□□ 0.33
RAB40C-202ENST00000509637 GRSF1Q12849 480 aaKnown RBP eCLIP17.09■□□□□ 0.333e-7■■■■□ 19.7
RAB40C-202ENST00000509637 MTF1Q14872 753 aa17.09■□□□□ 0.33
RAB40C-202ENST00000509637 RPLP0P6Q8NHW5 317 aa17.09■□□□□ 0.33
RAB40C-202ENST00000509637 MRPS31Q92665 395 aaKnown RBP17.09■□□□□ 0.33
RAB40C-202ENST00000509637 TRMT2BQ96GJ1 504 aaKnown RBP17.09■□□□□ 0.33
RAB40C-202ENST00000509637 ZC3H10Q96K80 434 aaKnown RBP17.09■□□□□ 0.33
RAB40C-202ENST00000509637 RBAKQ9NYW8 714 aaPredicted RBP17.09■□□□□ 0.33
RAB40C-202ENST00000509637 PTPRDP23468 1912 aa17.08■□□□□ 0.33
RAB40C-202ENST00000509637 VPS37CA5D8V6 355 aaPredicted RBP17.08■□□□□ 0.32
RAB40C-202ENST00000509637 TULP1O00294 542 aaPredicted RBP17.08■□□□□ 0.32
RAB40C-202ENST00000509637 GARTP22102 1010 aa17.08■□□□□ 0.32
RAB40C-202ENST00000509637 DDX6P26196 483 aaKnown RBP eCLIP17.08■□□□□ 0.32
RAB40C-202ENST00000509637 PMLP29590 882 aa17.08■□□□□ 0.32
RAB40C-202ENST00000509637 OPRD1P41143 372 aa17.08■□□□□ 0.32
RAB40C-202ENST00000509637 LIMK1P53667 647 aa17.08■□□□□ 0.32
RAB40C-202ENST00000509637 CACNA2D1P54289 1103 aa17.08■□□□□ 0.32
RAB40C-202ENST00000509637 PSMC1P62191 440 aaKnown RBP17.08■□□□□ 0.32
RAB40C-202ENST00000509637 TSPY1Q01534 308 aa17.08■□□□□ 0.32
RAB40C-202ENST00000509637 FAM160A1Q05DH4 1040 aa17.08■□□□□ 0.32
RAB40C-202ENST00000509637 NFE2Q16621 373 aaPredicted RBP17.08■□□□□ 0.32
RAB40C-202ENST00000509637 RRAGBQ5VZM2 374 aa17.08■□□□□ 0.32
RAB40C-202ENST00000509637 CACNA2D4Q7Z3S7 1137 aa17.08■□□□□ 0.32
RAB40C-202ENST00000509637 CBWD2Q8IUF1 395 aa17.08■□□□□ 0.32
RAB40C-202ENST00000509637 LRRC52Q8N7C0 313 aa17.08■□□□□ 0.32
RAB40C-202ENST00000509637 SH3RF2Q8TEC5 729 aa17.08■□□□□ 0.32
RAB40C-202ENST00000509637 OSCP1Q8WVF1 389 aa17.08■□□□□ 0.32
RAB40C-202ENST00000509637 ZNF560Q96MR9 790 aa17.08■□□□□ 0.32
RAB40C-202ENST00000509637 USP28Q96RU2 1077 aa17.08■□□□□ 0.32
RAB40C-202ENST00000509637 P2RY13Q9BPV8 354 aa17.08■□□□□ 0.32
RAB40C-202ENST00000509637 GZF1Q9H116 711 aaPredicted RBP17.08■□□□□ 0.32
RAB40C-202ENST00000509637 KIF9Q9HAQ2 790 aa17.08■□□□□ 0.32
RAB40C-202ENST00000509637 TRPC7Q9HCX4 862 aa17.08■□□□□ 0.32
RAB40C-202ENST00000509637 ABCB6Q9NP58 842 aa17.08■□□□□ 0.32
RAB40C-202ENST00000509637 OLFML3Q9NRN5 406 aa17.08■□□□□ 0.32
RAB40C-202ENST00000509637 SEL1LQ9UBV2 794 aa17.08■□□□□ 0.32
RAB40C-202ENST00000509637 SOBPA7XYQ1 873 aa17.07■□□□□ 0.32
RAB40C-202ENST00000509637 K7EQS6 105 aa17.07■□□□□ 0.32
RAB40C-202ENST00000509637 HUS1O60921 280 aa17.07■□□□□ 0.32
RAB40C-202ENST00000509637 CST3P01034 146 aaPredicted RBP17.07■□□□□ 0.32
RAB40C-202ENST00000509637 GAP43P17677 238 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms